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Proceeding Paper

2D Supramolecular Structure for a Chiral Heterotrinuclear ZnII2HoIII Complex through Varied HBonds Connecting Solvates and Counterions †

by
Julio Corredoira-Vázquez
,
Matilde Fondo
,
Jesús Sanmartín-Matalobos
and
Ana M. García-Deibe
*
Department of Inorganic Chemistry, Faculty of Chemistry, Campus Vida, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
*
Author to whom correspondence should be addressed.
Presented at the 1st International Electronic Conference on Crystals, 21–31 May 2018. Available online: https://sciforum.net/conference/IECC_2018.
Proceedings 2018, 2(14), 1114; https://doi.org/10.3390/IECC_2018-05247
Published: 21 May 2018
(This article belongs to the Proceedings of The 1st International Electronic Conference on Crystals)

Abstract

:
We report the crystal structure of [ZnII2HoIII(L)(ald)(HO)(H2O)3(MeCN)](NO3)2·EtOH [H3L = 2-(5-bromo-2-hydroxy-3-methoxyphenyl)-1,3-bis[4-(5-bromo-2-hydroxy-3-methoxyphenyl)-3-azabut-3-enyl]-1,3-imidazolidine) and Hald = 5-bromo-2-hydroxy-3-methoxy-benzaldehyde]. Despite the presence of two bulky multidentate ligands, as well as several monodentate ligands surrounding the nonacoordinate holmium cation, and the two pseudooctahedral zinc ions, the intricate H-bonded system formed by this chiral heterotrinuclear complex is only expanded in a 2D supramolecular structure. The interactions involve the nitrate counterions and the solvated ethanol, in such way that each complex unit is connected to an identical enantiomer, and to two units of inverted chirality through H bonds.

1. Introduction

Coordination chemistry of lanthanoids has experimented a substantial development in past years. The interest in this area is closely related to that in single-molecule magnets (SMMs) and single-ion magnets (SIMs), and their potential applications [1]. Concurrently, a particular interest has been devoted to heteronuclear {s-/3d-4f}-coordination complexes, as their combination can afford different properties, and hence, new polyfunctional molecules could arise [2,3,4,5]. For instance, the combination of zinc ions, and changes in the ancillary ligands could influence not only the anisotropy barrier [6], but it can additionally afford luminescent properties [6,7,8,9,10]. In this sense, we are particularly interested in obtaining lightluminescent molecular magnets. Thus, we have been recently involved in a research programme aiming to prepare, characterise and study not only discrete pure lanthanoid (Dy, Er, Tb) complexes, but also hybrid Zn-Ln polynuclear complexes containing one of the two polytopic ligands shown in Scheme 1 [11,12].
As a result of this previous work, we have found that complexes such as {[ZnDy(HL)(NO3)(OAc)(CH3OH)](NO3)}·1.25CH3OH·0.25H2O; [Zn2Dy(L)(NO3)2(OAc)2(H2O)] and [Zn2Er(L)(NO3)2(OAc)2(H2O)]·1.5H2O behave as induced SIMs [11], while [Zn2Dy(L’)(NO3)3(OH)] behaves as a fluorescent SIM [12].
As an extension of this work, in this occasion we have tried to combine zinc(II) and holmium(III) ions with H3L (Scheme 1), with the aim of getting further insight into the features of new Zn–Ho systems, as they could provide interesting results at a magnetic level [1,5,13,14].

2. Experimental

2.1. Materials and Methods

All chemical reagents were purchased from commercial sources and used as received without further purification.

2.2. Synthesis of [ZnII2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH

The ligand used in this work, 2-(5-bromo-2-hydroxy-3-methoxyphenyl)-1,3-bis[4-(5-bromo-2-hydroxy-3-methoxyphenyl)-3-azabut-3-enyl]-1,3-imidazolidine) (H3L, Scheme 1), was obtained as described in literature [11]. This three-armed ligand was subsequently employed to prepare the homodinuclear zinc(II) complex [Zn2(L)(OAc)], by using a method that has been also previously described by us [11]. With the aim of obtaining a heterotrinuclear complex, a methanol solution (8 mL) of Ho(NO3)3·5H2O (0.104 g, 0.24 mmol) was added to a suspension of [Zn2(L)(OAc)] (0.23 g, 0.24 mmol) in CH3CN (16 mL). This mixture was stirred at room temperature for ca. 15 h, giving rise to a yellow solution. The volume of this solution was firstly reduced to 10 mL in a rotary evaporator, and then, the solution was slowly evaporated at room temperature, but without yielding crystals. Hence, the recrstallisation of the yellow powdery precipitate was attempted in different conditions. The best results were obtained from a 2:1 acetonitrile:ethanol mixture, after a very slow evaporation. This latter solution allowed the formation of small yellow single crystals, which were suitable for X-ray diffraction studies. Data collected correspond to [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH (Hald = 5-bromo-2-hydroxy-3-methoxybenzaldehyde). As the amount isolated was very scarce, and given that it resulted to be a by-product, no further characterisation was performed.

2.3. Crystal Structure Determination

Single crystals of [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH were obtained as detailed above. Data were collected at 100 K on a Bruker Kappa APEXII CCD diffractometer employing graphite monochromated Mo-Kα (λ = 0.71073 Å) radiation. Multi-scan absorption corrections were applied using SADABS [15].
The structure was solved by standard direct methods, employing SHELXT [16], and then it was refined by full-matrix leastsquares techniques on F2, using SHELXL [17]. All non-hydrogen atoms, including counterions and solvates, were anisotropically refined. Hydrogen atoms were included in the structure factor calculations in geometrically idealised positions in most of cases. Hydrogen atoms potentially involved in classic H bonds were located in Fourier maps, and then they were refined with thermal factors depending on the parent atoms.
Crystal data and experimental parameters relevant to the structure determinations are listed in Table 1. Supplementary crystallographic data for this paper have been deposited at Cambridge Crystallographic Data Centre (CCDC-1843238) and can be obtained free of charge via www.ccdc.cam.ac.uk/conts/retrieving.html.

3. Results and Discussion

3.1. Synthetic Method

Keeping in mind the magnetic results previously obtained with H3L and H3L’, our goal was obtaining heterotrinuclear holmium(III) and zinc(II) complexes with H3L. The synthetic method was designed on the basis of our previous experience with H3L [11], and H3L’ [12] (Scheme 1). A template method using appropriate molar ratios of the corresponding aldehyde, tetraamine and metal salts had resulted as being useful to obtain mononuclear and even heteronuclear complexes with H3L’ (Scheme 1) [12], but this method was not suitable for H3L, as the previous isolation of the tricondensed ligand was necessary to prepare its complexes.
By direct reaction of H3L with dysprosium(III), erbium(III) and terbium(III) nitrates and zinc acetate [ZnIILnIII(HL)(NO3)(OAc)(CH3OH)](NO3) could be obtained, even using 1:1 or 1:2 molar ratios of the metal salts [11]. We had to employ the homodinuclear metalloligand [Zn2(L)(OAc)] as starting material to prepare complexes of the [Zn2Ln(L)(NO3)2(OAc)2(H2O)] type (Ln = DyIII, ErIII). By contrast, this method also failed when using TbIII, as it also produces a heterodinuclear complex [11].
Unfortunately, and despite multiple attempts made with different methods, no pure samples of di- or hetetrironuclear analogous with holmium(III) ions could be isolated. In fact, the only pure and crystalline compound that has been accurately identified was a by-product identified as [ZnII2HoIII(L3)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH by its crystal structure (Figure 1). It is clear that both the deprotonated aldehyde ligand (ald), and the hydroxide ion appear resulting from some hydrolysis that occurred during either the reaction, or the recrystallisation processes.
Despite the high stability shown by this type of three-armed ligands when we had worked with them ([11,12] and own references therein), the reason for these fruitless results could be related to reaction and/or crystallisation periods longer than usual, with a partial decomposition of H3L. This fact had been previously detected for another related ligand [18]. Unfortunately, the lack of a sufficient amount of sample, with a guaranteed purity, prevented us from performing further studies of this complex.

3.2. Spatial Arrangement of [ZnII2HoIII(L3)(ald)(HO)(H2O)(MeCN)]2+

Despite the symmetry of the three-armed H3L ligand (Scheme 1), and even of both Zn···Ho distances, [ZnII2HoIII(L)(ald)(HO)(H2O)(MeCN)]2+ is chiral. In Figure 1, we can see the enantiomer where the chiral C12, N2 and N3 atoms are displaying S configurations. The main geometric parameters are listed in Table 2.
Chirality is related not only to the irregular coordination environment of the holmium atom, but also to the two different solvent molecules (MeCN and water) coordinated to each internal zinc atom. These zinc ions show distorted octahedral environments, which are sharing one of their faces with the pseudo-polyhedron around Ho1 (Figure 2), in contrast with the pentacoordinate [Zn2(L)(OAc)] precursor. This change is favoured by the substitution of the µ211 bridging acetate by a tiny µ3-OH anion. This also leads to a significative folding of both N,O,O,N donor sites to ca. 73.4° (only ca. 26.3° in [Zn2(L)(OAc)]), and the subsequent coordination of these two solvates on those apexes opposite to the phenoxy group (O3) attached to the central bridging arm of L3−.
With regard to the holmium(III) ion, it is surrounded by nine O atoms that belong to the phenoxy and methoxy groups attached to the two terminal arms of L3− (O1, O2, O5, O6) and to the deprotonated aldehyde residue (O7, O8), as well as to the hydroxide ion (O1h), and to two water molecules (O1w, O3w). The degree of distortion of this HoO9 coordination sphere with respect to an ideal nine-vertex polyhedron was calculated with the SHAPE software [19], and it indicates that nearly corresponds to a “muffin-like” geometry (Figure 2).
Curiously, this complex is noticeably reminiscent of [Zn2Dy(L’)(NO3)3(OH)] [12], more so than those ones derived from L3− and [Zn2(L)(OAc)] [11]. Thus, as occurring in [Zn2Dy(L’)(NO3)3(OH)], the tight µ3111-HO bridge leads to the three metal ions to appear as an isosceles triangle, since d(Zn1···Zn2), is ca. 3.04, while both Zn···Ho1 distances are about 3.45 Å. These intermetallic distances are similar to those found for other ZnHo complexes with polycompartmental Schiff bases [20,21], and also with the 3-EtO-salen2− ligand [22,23]. By contrast, the Zn···Ln distances are clearly asymmetric in [Zn2Ln(L)(OAc)2(NO3)2(H2O)] (Ln = DyIII and ErIII) (about 3.45 and 4.7 Å) [11].

3.3. Packing Scheme for [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH

With the presence of so many O and N atoms in the ligands, three coordinated water molecules, an ethanol solvate, and two nitrate counterions is not surprising that this complex can give rise to an intricate H bonding scheme. However, this packing scheme presents some interesting features at a supramolecular level. To simplify its study, only classic O-H···O bonds are listed in Table 3, but several bifurcations, and many C-H···A interactions (A = O or Br) have been also detected. The basic O-H···O network is shown in Figure 3.
It is evident that both the enveloping three-armed ligand and the ancillary aldehyde ligand can exert a considerable steric hindrance for the intermolecular propagation of classic H bonds. Nevertheless, this does not avoid the multidirectional expansion of multiple O—H···O bonds from the three water molecules and the hydroxide anion to form an extended supramolecular structure. Curiously, this growth exclusively occurs in a perfect 2D arrangement, parallel to the b axis of the unit cell (Figure 3 and Figure 4).
To form these supramolecular layers, each heterotrinuclear cation is simultaneously acting as H-donor, through the µ3-HO group and a water molecule coordinated to the holmium atom, connected to two O acceptors belonging to one of the nitrate counterions, while the water molecule is also linked to a solvated ethanol molecule. This substructure is mutually connected to an inverted one, as the third O atom of each nitrate is acting as an H-acceptor for the ethanol solvate of the other substructure. Additionally, a second water molecule coordinated to the holmium atom displays an intramolecular H-bond to the methoxy group of the central arm of L3−, and an intermolecular one involving a second nitrate counterion.
Finally, the water molecule coordinated to one of the zinc atoms participates in an intramolecular bifurcated H-bond with the deprotonated aldehyde ligand, while it is additionally connected to an O atom of a third nitrate anion, which also participate in the second type of interactions described above. Thus, each one of the enantiomers of the complex is H-bonded to three nitrate ions, and it is also connected to an identical enantiomer, and to two units of inverted chirality, but all of them extended on infinite 2D sheets. These interactions are illustrated by Figure 3 and Figure 4.
The surface of each layer thusly formed presents a hydrophobic character, as the predominant bonds are mostly C—H, corresponding to imidazolidine rings, ethylene chains and aromatic rings. Likewise, C—Br bonds and some nitrate counterions that are scarcely accessible are forming part of this surface (Figure 3). Consequently, these layers are not connected via classic bonds, but through C—H···A bonds (A = O or Br). This behaviour has been previously observed for other related ligands [24].

4. Conclusions

The heterotrinuclear complex [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH is chiral due to the asymmetry of the different coordination environments. Despite the presence of multiple and varied potential donors and acceptors for H bonding, the packing scheme is basically bidimensional, and mostly based on classic O—H···O bonds. The surface of the layers formed is rather hydrophobic, and the interaction between layers mostly depends on C—H···Br and C—H···O interactions.

Supplementary Materials

Supplementary crystallographic data for this paper have been deposited at Cambridge Crystallographic Data Centre (CCDC-1843238) and can be obtained free of charge via www.ccdc.cam.ac.uk/conts/retrieving.html.

Author Contributions

The manuscript was written through contributions of all authors. All authors have given approval to the final version of the manuscript.

Acknowledgments

Financial support from Ministerio de Economía y Competitividad (MINECO, CTQ2014-56312-P) is gratefully acknowledged. JC-V thanks the Xunta de Galicia for his Ph.D. fellowship

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Scheme 1. Ligands used in our work. In this particular case we have employed H3L.
Scheme 1. Ligands used in our work. In this particular case we have employed H3L.
Proceedings 02 01114 sch001
Figure 1. Ellipsoid view of the (S;S;S) enantiomer of [ZnII2HoIII(L)(ald)(HO)(H2O)(MeCN)]2+.
Figure 1. Ellipsoid view of the (S;S;S) enantiomer of [ZnII2HoIII(L)(ald)(HO)(H2O)(MeCN)]2+.
Proceedings 02 01114 g001
Figure 2. Pseudo-polyhedra of the coordination environments of the holmium(III) and zinc(II) ions for the (S,S,S) enantiomer of [ZnII2HoIII(L)(ald)(HO)(H2O)(MeCN)]2+.
Figure 2. Pseudo-polyhedra of the coordination environments of the holmium(III) and zinc(II) ions for the (S,S,S) enantiomer of [ZnII2HoIII(L)(ald)(HO)(H2O)(MeCN)]2+.
Proceedings 02 01114 g002
Figure 3. Sticks representation of one of the 2D layers connected through classic O—H··O bonds (blue and red dotted lines) formed by [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
Figure 3. Sticks representation of one of the 2D layers connected through classic O—H··O bonds (blue and red dotted lines) formed by [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
Proceedings 02 01114 g003
Figure 4. Sticks view perpendicular to the a face of the monoclinic unit cell showing the classic O—H···O interactions (blue and red dotted lines).
Figure 4. Sticks view perpendicular to the a face of the monoclinic unit cell showing the classic O—H···O interactions (blue and red dotted lines).
Proceedings 02 01114 g004
Table 1. X-ray crystallographic data for [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
Table 1. X-ray crystallographic data for [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
FormulaC40H46Br4HoN5O13Zn2·2(NO3)·C2H6O
M1590.21
Crystal dimensions (mm)0.18 × 0.12 × 0.04
Crystal System, Space groupMonoclinic, P21/n
a, b, c (Å)12.930 (1), 17.7500 (12), 17.7500 (12)
α, β, γ (°)90, 101.885(5), 90
θ Ranges (°)2.0–28.3
V3), μ/mm−15383.1 (7), 5.39
Z4
F(000)3120
Dx/g·cm−31.962
h, h/−k, k/−l, l−17, 17/−23, 23/−31, 31
Total, unique and [I > 2σ(I)] reflections180,748, 13,340, 10,903
No. of reflections, restraints, parameters13,340, 0, 692
Rint0.082
Final R, wR0.056, 0.119
R, wR (all data)0.074, 0.126
∆ρmax, ∆ρmin (e/Å3)2.26, −3.39
Table 2. Main geometric parameters for [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
Table 2. Main geometric parameters for [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
Zn1—O1H2.018(4)Zn2—O1H2.031(4)Ho1—O82.315(5)
Zn1—N12.055(6)Zn2—N42.048(5)Ho1—O52.328(4)
Zn1—O12.056(4)Zn2—O52.054(4)Ho1—O1H2.348(4)
Zn1—O32.122(4)Zn2—O32.124(4)Ho1—O12.371(4)
Zn1—N1S2.203(6)Zn2—O2W2.132(5)Ho1—O3W2.380(4)
Zn1—N22.250(5)Zn2—N32.201(5)Ho1—O72.387(5)
O1H—Zn1—N1169.0(2)O1H—Zn2—N4170.68(19)Ho1—O1W2.423(4)
O3—Zn1—N1S168.5(2)O3—Zn2—O2W166.70(18)Ho1—O62.660(5)
O1—Zn1—N2170.48(18)O5—Zn2—N3169.80(19)Ho1—O22.671(5)
O8—Ho1—O573.77(18)O1H—Ho1—O168.75(15)O1—Ho1—O3W74.89(15)
O8—Ho1—O1H75.42(19)O8—Ho1—O3W77.42(18)O8—Ho1—O771.27(19)
O5—Ho1—O1H69.58(15)O1H—Ho1—O3W78.31(15)O3W—Ho1—O772.50(16)
O5—Ho1—O1W72.03(15)O1—Ho1—O1W73.56(15)O8—Ho1—O679.79(18)
Table 3. Main classic H bonds found for [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
Table 3. Main classic H bonds found for [Zn2HoIII(L)(ald)(HO)(H2O)(MeCN)](NO3)2·EtOH.
D—H···Ad(D—H)d(H···A)d(D···A)<(DHA)
O(1H)—H(1H)···O(22)0.871.902.769(6)177.6
O(1W)—H(1W1)···O(3)0.802.353.069(6)149.9
O(1W)—H(1W1)···O(4)0.802.202.848(6)137.7
O(1W)—H(1W2)···O(10)0.832.092.888(8)161.3
O(2W)—H(2W1)···O(9)0.742.162.877(7)164.2
O(2W)—H(2W2)···O(10) #10.842.002.816(8)162.9
O(3W)—H(3W1)···O(1S)0.731.982.694(7)164.1
O(3W)—H(3W2)···O(21)0.782.052.807(7)164.7
O(1S)—H(1S)···O(23) #20.841.962.778(8)163.0
#1 –x + 3/2,y − 1/2,−z + 1/2; #2 –x + 2,−y,−z.
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Corredoira-Vázquez, J.; Fondo, M.; Sanmartín-Matalobos, J.; García-Deibe, A.M. 2D Supramolecular Structure for a Chiral Heterotrinuclear ZnII2HoIII Complex through Varied HBonds Connecting Solvates and Counterions. Proceedings 2018, 2, 1114. https://doi.org/10.3390/IECC_2018-05247

AMA Style

Corredoira-Vázquez J, Fondo M, Sanmartín-Matalobos J, García-Deibe AM. 2D Supramolecular Structure for a Chiral Heterotrinuclear ZnII2HoIII Complex through Varied HBonds Connecting Solvates and Counterions. Proceedings. 2018; 2(14):1114. https://doi.org/10.3390/IECC_2018-05247

Chicago/Turabian Style

Corredoira-Vázquez, Julio, Matilde Fondo, Jesús Sanmartín-Matalobos, and Ana M. García-Deibe. 2018. "2D Supramolecular Structure for a Chiral Heterotrinuclear ZnII2HoIII Complex through Varied HBonds Connecting Solvates and Counterions" Proceedings 2, no. 14: 1114. https://doi.org/10.3390/IECC_2018-05247

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