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Article

A Protoplast-Based Transient Expression System for Rapid Gene Functional Analysis in Gardenia jasminoides

1
Key Laboratory of Cultivation and Protection for Non-Wood Forest Trees, State Key Laboratory of Woody Oil Resources Utilization, Central South University of Forestry and Technology, Changsha 410004, China
2
Key Laboratory of Forest Bio-Resources and Integrated Pest Management for Higher Education in Hunan Province, Central South University of Forestry and Technology, Changsha 410004, China
3
Higher Polytechnic School, University of Almeria, 04120 Almeria, Spain
*
Authors to whom correspondence should be addressed.
These authors contributed equally to this work.
Horticulturae 2026, 12(4), 436; https://doi.org/10.3390/horticulturae12040436
Submission received: 7 March 2026 / Revised: 30 March 2026 / Accepted: 31 March 2026 / Published: 2 April 2026

Abstract

Gardenia jasminoides Ellis is a commercially important medicinal and ornamental plant; however, its functional genomics remain poorly understood because of the lack of efficient cell-based research tools. To address this limitation, we established an optimized method for isolating viable protoplasts from petal and mesophyll tissues of G. jasminoides and developed a polyethylene glycol (PEG)-mediated transient expression system. For petal protoplast isolation, the optimal enzyme combination consisted of 3.0% cellulase R-10 and 1.0% macerozyme R-10 supplemented with 0.5 M D-mannitol, yielding 5.26 × 106 protoplasts per gram fresh weight (FW) with 80.63% viability. For mesophyll protoplast isolation, 1.5% cellulase R-10 and 0.5% macerozyme R-10 supplemented with 0.5 M D-mannitol produced 8.75 × 106 protoplasts g−1 FW with 84.55% viability. PEG-mediated transient transformation was optimized at 20% PEG4000 for petal protoplasts and 40% PEG4000 for mesophyll protoplasts, resulting in efficient GFP expression. This system was successfully applied to subcellular localization analyses of floral regulatory proteins (GjAP3, GjPI, and GjSEP) and defense-related proteins (GjNPR1 and GjTGA2), as well as to the validation of protein–protein interactions between GjSEP and GjPI and between GjNPR1 and GjTGA2 using bimolecular fluorescence complementation and yeast two-hybrid assays. Collectively, these results establish a reliable and species-specific protoplast-based platform for rapid functional characterization of genes in G. jasminoides, providing an effective tool for future studies on gene regulation, metabolic engineering, and molecular breeding in this horticultural plant species.

1. Introduction

Gardenia jasminoides Ellis (Rubiaceae), commonly known as gardenia or cape jasmine, is a perennial evergreen shrub of considerable historical and contemporary importance in Southeast Asia and the temperate regions of East Asia. In recent years, research on G. jasminoides has mainly focused on the extraction and identification of its chemical constituents and the evaluation of its pharmacological properties [1]. However, functional genomic studies at the cellular level, particularly the molecular mechanisms underlying key trait regulation, remain largely unexplored. As a medicinal and ornamental plant, G. jasminoides is widely cultivated from subtropical to temperate regions, with its major production concentrated in subtropical areas. With the rapid development of the pharmaceutical, cosmetic and horticultural industries, the global demand for G. jasminoides has continued to increase, and its economic value and cultural significance have become increasingly prominent. Compared with coffee, a plant in the same family (Rubiaceae) [2], basic research and studies on the molecular mechanisms of G. jasminoides are still markedly limited. Although the biosynthetic mechanisms of medicinal compounds such as geniposide and crocin, as well as its physiological responses to stress, have attracted increasing attention [3], major technical challenges remain in functional gene mining, metabolic pathway analysis, and the establishment of genetic transformation systems.
In recent years, advances in plant protoplast isolation and transformation technologies have provided powerful tools for gene function studies. As wall-less cells, protoplasts are highly suitable materials for transient gene expression, enabling efficient functional analysis and rapid verification of homologous gene functions [4]. In addition, plants regenerated from fused protoplasts generally exhibit low chimerism and high homozygosity, thus offering new opportunities for crop improvement and breeding [5]. These characteristics make protoplasts particularly suitable for transient expression assays. Protoplast-based analyses of subcellular localization, protein–protein interactions, and gene regulatory mechanisms have become important approaches in plant molecular biology research [6]. However, to date, no protoplast isolation or transient expression system has been reported for G. jasminoides, which has greatly hindered in-depth functional studies and the effective utilization of its genetic resources.
Plant protoplasts are mainly isolated by either mechanical separation or enzymatic digestion. Although the mechanical method is relatively simple, it generally suffers from low yield, strict material requirements, and limited applicability. In contrast, enzymatic digestion degrades the cell wall using a complex enzyme mixture, such as cellulase and macerozyme, thereby efficiently and gently releasing intact and viable protoplasts [7]. Consequently, it has become the most widely used method for protoplast isolation. The efficiency of enzymatic digestion is influenced by multiple factors, including explant type, physiological status, pretreatment conditions, enzyme composition, the type and concentration of osmotic stabilizers, and digestion time [8]. Therefore, systematic optimization is required for different plant species and tissues [9,10]. In addition, purification procedures and centrifugation conditions directly affect the final yield and viability of protoplasts and are critical for establishing a stable isolation system.
Following successful protoplast isolation, the establishment of an efficient transient transformation system is essential for gene function analysis. Among the available methods, polyethylene glycol (PEG)-mediated transformation has become the most widely used approach for transient gene delivery into plant protoplasts because of its simplicity, low cost, and broad applicability. PEG facilitates the uptake of exogenous DNA by altering the physicochemical properties of the plasma membrane [11]. Transformation efficiency is affected by several factors, including protoplast density, plasmid amount, PEG type and concentration, and incubation time. Optimization of these parameters is crucial for achieving efficient exogenous gene expression. To date, PEG-mediated transformation has been successfully applied in several plant species, including Arabidopsis thaliana, banana, and Malus domestica [3,12,13], providing reliable platforms for gene function characterization.
With the aid of protoplast transient expression systems, researchers can rapidly perform a wide range of functional assays. For example, protoplasts from Arabidopsis thaliana have been widely used for subcellular localization analyses [14,15]. Protoplast-based systems also support protein–protein interaction assays, such as bimolecular fluorescence complementation (BiFC) [16], as well as the validation of gene-editing efficiency [17], thereby greatly improving the efficiency and accuracy of functional studies. In particular, the use of green fluorescent protein (GFP) as a reporter has made it more convenient to visualize gene expression and protein localization in living cells [18]. However, due to the lack of a species-specific protoplast system in G. jasminoides, most functional analyses still rely on heterologous expression in model plants, which may not fully reflect the biological processes of G. jasminoides.
Therefore, this study aimed to establish an efficient protoplast isolation system using petals and mesophyll tissues of G. jasminoides, optimize PEG-mediated transient transformation conditions, and ultimately develop a stable and reliable protoplast transient expression system for this species. The establishment of this system provides a useful platform for the preliminary functional characterization of genes in G. jasminoides, particularly the molecular mechanisms underlying flower development, biosynthesis of medicinal compounds, and stress responses. In addition, it will provide important technical support and a theoretical basis for subsequent studies on genetic transformation, gene editing, and cultivar improvement, thereby promoting the molecular breeding and industrial application of G. jasminoides.

2. Materials and Methods

2.1. Plant Materials

The plant materials used in this study included 4-year-old G. jasminoides plants naturally grown in the rooftop experimental plot of the Forestry Building, Central South University of Forestry and Technology. Freshly opened petals of G. jasminoides and leaves from aseptic seedlings regenerated through tissue culture of newly emerged shoots were collected for the experiments. Nicotiana benthamiana seedlings were grown under a 16 h light/8 h dark photoperiod at 23 °C.
The flowering period of G. jasminoides generally extends from May to August, lasting approximately 3–4 months. The full-flowering period of a single plant typically lasts 20–30 days, whereas the lifespan of an individual flower is only 3–5 days (Figure 1A). To establish an efficient method for protoplast isolation from petals and mesophyll tissues, fully expanded petals and fresh leaves from tissue-cultured seedlings were selected as materials for protoplast preparation (Figure 1A,B). To improve the isolation efficiency and quality of petal protoplasts, three pretreatment methods, namely cutting (The sharp blade rapidly cuts into strips approximately 0.1 mm in width), scratching (Cause epidermal abrasion by slicing petals with a blade), and peeling (Use tape to adhere both sides of the petals and remove the adhesive tape from the lower epidermis), were applied to G. jasminoides petals (Figure 1C). In contrast, for mesophyll protoplast isolation, the cutting method was applied to fresh leaves from tissue-cultured seedlings (Figure 1D), followed by enzymatic digestion.

2.2. Protoplast Isolation

2.2.1. Isolation of Petal Protoplasts from G. jasminoides

Freshly opened petals of G. jasminoides were collected and immediately used for protoplast isolation. The petals were rinsed with sterile water, and surface moisture was removed using filter paper. The abaxial epidermis was then carefully peeled off with adhesive tape to fully expose the inner cells. The treated petals were subsequently incubated in freshly prepared enzyme solution containing 10 mM CaCl2, 20 mM KCl, 20 mM MES (pH 5.7), cellulase R-10 (Yakult, Tokyo, Japan), macerozyme R-10 (Yakult, Tokyo, Japan), and mannitol (Sigma, St. Louis, MO, USA).
Protoplast yield was determined using a hemocytometer under an OLYMPUS BX53 light microscope (Olympus Corporation, Tokyo, Japan). Protoplast viability was assessed by fluorescein diacetate (FDA) (10 μg/mL dissolved in DMSO) staining. Protoplasts exhibiting green fluorescence were regarded as viable. The formulas used to calculate protoplast yield and viability are shown in Equations (1) and (2), respectively.
Protoplast   yield   ( number / g   FW ) = Number   of   protoplasts   released   in   the   enzymatic   solution Fresh   weight   of   the   petals   used
Protoplast   viability   ( % ) = Number   of   protoplasts   emitting   fluorescence Total   number   of   protoplasts × 100 %
To determine the optimal enzyme combination for petal protoplast isolation, three concentrations of cellulase R-10 (1.0%, 2.0%, and 3.0%, w/v) and two concentrations of macerozyme R-10 (1.0% and 2.0%, w/v) were tested, generating six enzyme treatment combinations in total. In all treatments, 0.4 M D-mannitol was used as the osmotic stabilizer, the enzyme solution pH was adjusted to 5.8, and samples were incubated in the dark at 25 °C with shaking at 40 rpm for 6 h. To further optimize petal protoplast isolation, the effects of digestion time, D-mannitol concentration, and centrifugation speed after enzymatic digestion were evaluated. Seven digestion time points (2, 3, 4, 5, 6, 7, and 8 h), and six D-mannitol concentrations (0.2, 0.3, 0.4, 0.5, 0.6, and 0.7 M) were tested. Centrifugation speeds of 300, 400, 500, 600, 700, 800, and 900 rpm were evaluated for petal protoplasts.

2.2.2. Isolation of Mesophyll Protoplasts from G. jasminoides

Mesophyll protoplasts were isolated from young leaves of in vitro-cultured G. jasminoides seedlings. The leaves were rinsed with sterile water, blotted dry, and then quickly cut into 0.5–1 mm-wide strips before being transferred into freshly prepared enzyme solution. The enzyme solution consisted of 10 mM CaCl2, 20 mM KCl, 20 mM MES (pH 5.7), cellulase R-10, macerozyme R-10, and mannitol. Protoplast yield and viability were assessed using the same methods as those described for petal protoplasts.
To optimize mesophyll protoplast isolation from G. jasminoides leaves, tissue-cultured seedlings bearing young leaves were used as the source material. Cellulase R-10 was tested at 1.0%, 1.5%, and 2.0% (w/v), whereas macerozyme R-10 was tested at 0.5% and 1.0% (w/v), resulting in six enzyme combinations. In all treatments, 0.5 M mannitol was used as the osmotic stabilizer, the enzyme solution pH was adjusted to 5.8, and samples were incubated in the dark at 25 °C with shaking at 50 rpm for 6 h. To further optimize mesophyll protoplast isolation, the same seven digestion time points (2, 3, 4, 5, 6, 7, and 8 h), and six D-mannitol concentrations (0.2, 0.3, 0.4, 0.5, 0.6, and 0.7 M) were tested. Centrifugation speeds of 200, 300, 400, 500, 600, 700, and 800 rpm were tested for mesophyll protoplasts.
Each sample was counted at least three times, and the experiment was independently repeated three times.

2.3. Protoplast Transformation

2.3.1. PEG-Mediated Transient Transformation of Petal Protoplasts

PEG-mediated transient gene expression in G. jasminoides petal protoplasts was performed based on a previously reported method with modifications [19]. After enzymatic digestion, the protoplast suspension was filtered into a 50 mL centrifuge tube and centrifuged at 500 rpm for 2 min at room temperature to collect the protoplasts. The supernatant was discarded, and the protoplast pellet was gently resuspended in 5 mL of pre-cooled W5 solution, followed by incubation on ice for 30 min. Although a range of 1 × 105–1 × 106 cells/mL was tested during optimization, a final protoplast density of 1 × 106 cells/mL was used in all subsequent experiments unless otherwise stated.
For transformation, 200 μL of protoplast suspension was gently mixed with plasmid DNA in a 2 mL centrifuge tube. To determine the optimal plasmid amount, 2, 4, 6, 8, and 10 μg DNA were tested (Figure S2B). Immediately afterward, 220 μL of PEG-CaCl2 solution containing 20% PEG4000, 100 mM CaCl2, and 0.2 M mannitol (pH 5.7) was added and gently mixed. To optimize the PEG concentration, 10%, 20%, 30%, 40%, and 50% (w/v) PEG4000 were evaluated (Figure S2A). The mixture was incubated at room temperature in the dark for 20 min, and transformation was terminated by adding 800 μL of W5 solution.
The mixture was then centrifuged at 500 rpm for 2 min, the supernatant was removed, and the pellet was gently resuspended in 200 μL of WI solution containing 4 mM MES, 20 mM KCl, and 0.5 M mannitol (pH 5.7). All solutions were sterilized by filtration through a 0.22 μm membrane filter before use. The transformed protoplasts were incubated in the dark at 25 °C for 12–16 h, and GFP fluorescence was observed using a laser confocal microscope with an excitation wavelength of 488 nm and an emission wavelength of 510–530 nm. Transformation efficiency was calculated according to Equation (3).
Transformation   efficiency   ( % ) = Number   of   GFP positive   protoplasts   in   the   field Number   of   protoplasts   in   the   field × 100 %
At least three independent biological replicates were performed, and more than 200 cells were counted per replicate.

2.3.2. PEG-Mediated Transient Transformation of Mesophyll Protoplasts

PEG-mediated transient transformation of G. jasminoides mesophyll protoplasts was performed in a similar manner, with conditions optimized for mesophyll-derived protoplasts [20]. After enzymatic digestion, the protoplast suspension was filtered and centrifuged at 400 rpm for 2 min at room temperature to collect the protoplasts. The protoplast pellet was gently resuspended in 5 mL of pre-cooled W5 solution (200 μL 0.5 M MES, 7.7 mL 1 M NaCl, 6.25 mL 1 M CaCl2, 500 μL 0.5 M KCl, and ddH2O were diluted to 50 mL) and incubated on ice for 30 min. The protoplast concentration was then adjusted to approximately 1 × 105–1 × 106 cells mL−1 using MMG solution (400 μL 0.5 M MES, 24.9 mL 0.8 M D-Mannitol, 1.5 mL 0.5 M MgCl2, and ddH2O were diluted to 50 mL).
For transformation, 200 μL of protoplast suspension was gently mixed with plasmid DNA, and 2, 4, 6, 8, and 10 μg DNA were tested to optimize the plasmid amount (Figure S2D). Subsequently, 220 μL of PEG-CaCl2 solution containing 40% PEG4000 (Figure S2C), 100 mM CaCl2, and 0.2 M mannitol (pH 5.7) was added and gently mixed. The mixture was incubated in the dark at room temperature for 20 min. Transformation was terminated by adding 800 μL of W5 solution, followed by centrifugation at 400 rpm for 2 min using Low-speed small centrifuge (Scilogex, Rocky Hill, CT, USA). The supernatant was discarded, and the pellet was gently resuspended in 200 μL of WI solution (37.5 mL 0.8 M D-Mannitol, 400 μL 0.5 M MES, 400 μL 0.5 M KCl, and ddH2O were diluted to 50 mL). The transformed protoplasts were incubated in the dark at 25 °C for 12–16 h, and GFP fluorescence was observed under a laser confocal microscope. Transformation efficiency was calculated as described above. Each treatment was independently repeated three times.

2.4. Plasmid Construction and Protein Subcellular Localization

Total RNA was extracted from fresh flower buds of G. jasminoides using a rapid universal plant RNA extraction kit (Beijing Huayueyang Biotechnology Co., Ltd., Beijing, China). First-strand cDNA was synthesized from 3 μg of total RNA using anchored oligo(dT) primers and TransScript® First-Strand cDNA Synthesis SuperMix (AT301, TransGen Biotech, Beijing, China) according to the manufacturer’s instructions.
Gene-specific primers containing homologous overlapping ends were designed using Primer Premier 5.0 based on the CDS of GjAP3, GjPI, GjSEP, GjNPR1, and GjTGA2 (Table S1). The target genes were amplified by PCR using Phanta Max Master Mix (Vazyme Biotech, Nanjing, China), 0.4 μL PCR Forward Primer (10 μM), 0.4 μL PCR Reverse Primer (10 μM), 1 μL 1:20 cDNA, and ddH2O to diluted to 10 μL. PCR amplification was performed using the following cycling conditions: an initial denaturation at 95 °C for 3 min, followed by 37 cycles of denaturation at 95 °C for 15 s, annealing at 56 °C for 15 s, and extension at 72 °C for 30 s per kb, with a final extension at 72 °C for 5 min. The PCR products were purified and introduced into the pDONR207 vector by BP recombination using Gateway™ BP Clonase II Mix (Invitrogen, Carlsbad, CA, USA). After sequence verification, the entry clones were transferred into the Gateway-compatible destination vector pB7WGF2 by LR recombination using Gateway™ LR Clonase II Mix (Invitrogen, Carlsbad, CA, USA) [21,22,23], generating the recombinant plasmids GFP-GjAP3, GFP-GjPI, GFP-GjSEP, GFP-GjNPR1, and GFP-GjTGA2.
For transient expression in protoplasts, plasmid DNA was prepared on a large scale using a Plasmid Maxprep Kit (Vigorous Biotechnology, Beijing, China). The recombinant plasmids and the empty GFP vector, used as a control, were separately introduced into G. jasminoides petal or mesophyll protoplasts by PEG-mediated transformation. After incubation for 12–16 h, GFP fluorescence was observed and imaged using a laser scanning confocal microscope (Olympus Corporation, Tokyo, Japan).
As a parallel control, subcellular localization was also examined in tobacco leaves by Agrobacterium tumefaciens-mediated transient expression. The plasmids were introduced into A. tumefaciens strain GV3101 (pSoup) and cultured overnight at 28 °C. The bacterial cells were collected and resuspended in infiltration buffer containing 10 mM MES (pH 5.7), 10 mM MgCl2, and 100 μM acetosyringone, adjusted to an OD600 of 1.0, and incubated at room temperature for 2 h. The suspensions were then infiltrated into N. benthamiana leaves using a sterile syringe. After 48 h of incubation in the dark, GFP fluorescence was observed under the same confocal microscope. Based on previous studies, the expected subcellular localization of the proteins observed in G. jasminoides is consistent with that in N. benthamiana [23].

2.5. Protein–Protein Interaction in Yeast Cells and G. jasminoides Protoplasts

To verify protein–protein interactions, the CDS of GjSEP and GjPI were cloned into the Gateway-compatible destination vectors pGADT7 and pGBKT7, generating pGADT7-GjSEP and pGBKT7-GjPI, respectively. Yeast cells carrying empty pGADT7 and pGBKT7 vectors were used as negative controls, whereas yeast cells carrying pGADT7-GjSEP plus empty pGBKT7 or empty pGADT7 plus pGBKT7-GjPI were used as negative controls. The transformed yeast cells were cultured on SD/-Leu/-Trp medium at 29 °C for 48–96 h. Single colonies were selected, suspended in ddH2O, and spotted onto SD/-Leu/-Trp and SD/-Leu/-Trp/-His/-Ade selective media. After incubation at 29 °C for 48–96 h, colony growth was recorded.
BiFC analysis was performed in G. jasminoides petal protoplasts. Recombinant plasmids nYFP-GjSEP and cYFP-GjPI were generated by cloning the CDS of GjSEP and GjPI into the pCL112 and pCL113 vectors, respectively. nYFP-GjSEP and cYFP-GjPI were co-transformed into petal protoplasts. The negative controls included nYFP + cYFP, nYFP + cYFP-GjPI, and cYFP + nYFP-GjSEP. As a parallel control, the same experiment was performed in tobacco leaves by agroinfiltration.
Similarly, to verify the interaction between GjNPR1 and GjTGA2, the CDS of GjNPR1 and GjTGA2 were cloned into pGADT7 and pGBKT7, generating pGADT7-GjNPR1 and pGBKT7-GjTGA2, respectively. Yeast two-hybrid assays were performed as described above. For BiFC analysis in G. jasminoides mesophyll protoplasts, recombinant plasmids nYFP-GjNPR1 and cYFP-GjTGA2 were constructed and co-transformed. The negative controls included nYFP + cYFP, nYFP + cYFP-GjTGA2, and cYFP + nYFP-GjNPR1. Tobacco leaf agroinfiltration was used as a parallel control.

2.6. Statistical Analysis

Statistical analyses were performed using SPSS 20.0 software (SPSS Inc., Chicago, IL, USA). Each experiment included at least three independent biological replicates, and more than 200 cells were counted per replicate. The data were organized using Excel 2010. Data are presented as the mean ± standard error (SE) of three independent experiments and were plotted using GraphPad Prism 9 (GraphPad Software, La Jolla, CA, USA). Significant differences among groups were analyzed using One-way ANOVA followed by Duncan’s multiple range test at p < 0.05.

3. Results

3.1. Isolation of Protoplast from Petals of G. jasminoides

The results showed that different pretreatment methods had significant effects on petal protoplast yield (Figure S1). Among them, the peeling treatment produced the highest protoplast yield, reaching 5.26 × 106 g−1 FW, with a viability of 80.63%. Therefore, peeling was considered the most suitable method for petal protoplast preparation.

3.2. Optimization of Protoplast Yield and Viability from G. jasminoides

When cellulase R-10 and macerozyme R-10 were used at 3.0% and 1.0%, respectively, the highest protoplast yield was obtained, reaching 3.24 × 106 g−1 FW, with a viability of 80.67% (Figure 2A). This enzyme combination produced the highest protoplast yield and viability and was therefore selected as the optimal condition for subsequent experiments.
When cellulase R-10 and macerozyme R-10 were used at 1.5% and 0.5%, respectively, the highest mesophyll protoplast yield was obtained, reaching 8.75 × 106 g−1 FW, with a viability of 84.55% (Figure 2B). This enzyme combination produced the highest protoplast yield and viability. After filtration through a 70 μm nylon mesh and purification by centrifugation, the protoplasts were resuspended in W5 solution, yielding intact, transparent, spherical protoplasts. FDA staining further confirmed that the isolated protoplasts exhibited high viability (Figure 2C).
For petal protoplast isolation, the highest yield was obtained after 6 h of enzymatic digestion, reaching 2.27 × 106 g−1 FW, with a viability of 89.70% (Figure 3A). When the D-mannitol concentration was 0.5 M, both protoplast yield and viability reached their highest values, at 6.08 × 106 g−1 FW and 88.66%, respectively (Figure 3B). Similarly, when the centrifugation speed was 500 rpm, petal protoplast yield and viability peaked at 5.64 × 106 g−1 FW and 88.96%, respectively (Figure 3C).
For mesophyll protoplast isolation, the highest yield was also obtained after 6 h of enzymatic digestion, reaching 8.25 × 106 g−1 FW, with a viability of 69.28% (Figure 3D). When the D-mannitol concentration was 0.5 M, both protoplast yield and viability reached their highest values, at 8.93 × 106 g−1 FW and 77.33%, respectively (Figure 3E). In addition, when the centrifugation speed was increased to 400 rpm, the highest mesophyll protoplast yield was obtained, reaching 9.21 × 106 g−1 FW, with a viability of 87.98% (Figure 3F).

3.3. Transient Transformation and Subcellular Localization in G. jasminoides Protoplasts

To evaluate the applicability of the established protoplast transient expression system, subcellular localization analyses of GjAP3, GjPI, and GjSEP were conducted in petal protoplasts, whereas GjNPR1 and GjTGA2 were analyzed in mesophyll protoplasts. Heterologous expression in N. benthamiana was used as a parallel control. GFP-GjAP3, GFP-GjPI, GFP-GjSEP, and the empty GFP vector were transiently introduced into petal protoplasts, whereas GFP-GjNPR1, GFP-GjTGA2, and the empty GFP vector were introduced into mesophyll protoplasts. After 16 h of incubation, fluorescence signals were observed using a laser confocal microscope. As shown in Figure 4A, GFP and GFP-GjNPR1 fluorescence was distributed throughout the protoplast, whereas GFP-GjAP3, GFP-GjPI, GFP-GjSEP, and GFP-GjTGA2 fluorescence was restricted to the nucleus. Consistent localization patterns were observed in N. benthamiana leaves following Agrobacterium-mediated transient expression (Figure 4B). The subcellular localization of the proteins observed in G. jasminoides is line with that in N. benthamiana. These results support the reliability of the established protoplast transient expression system for functional studies in G. jasminoides.

3.4. Protein Interaction Analysis in G. jasminoides Protoplasts

In this study, yeast two-hybrid assays were first performed to examine potential interactions of the selected proteins. In petal-derived G. jasminoides protoplast-related assays, yeast cells co-transformed with GADT7-GjSEP and GBKT7-GjPI formed obvious colonies on SD/-Leu/-Trp/-His/-Ade medium. In contrast, the negative control groups showed no growth on SD/-Leu/-Trp/-His/-Ade medium, although all colonies grew normally on SD/-Leu/-Trp medium. These results indicated that GjSEP interacted with GjPI. Similarly, in the mesophyll-related assays, yeast cells co-transformed with GADT7-GjNPR1 and GBKT7-GjTGA2 formed obvious colonies on SD/-Leu/-Trp/-His/-Ade medium, whereas the negative controls did not grow on this selective medium but grew normally on SD/-Leu/-Trp medium (Figure 5A). These results indicated that GjNPR1 interacted with GjTGA2.
Bimolecular fluorescence complementation (BiFC) is an important approach for validating protein–protein interactions in vivo. Recombinant vectors cYFP-GjSEP and nYFP-GjPI were co-transformed into G. jasminoides petal protoplasts, whereas nYFP-GjNPR1 and cYFP-GjTGA2 were co-transformed into mesophyll protoplasts, with corresponding negative controls included. After 16 h of incubation, fluorescence signals were observed and imaged using a laser confocal microscope. As shown in Figure 5B, YFP fluorescence was detected in the nucleus of petal protoplasts co-transformed with cYFP-GjSEP and nYFP-GjPI, whereas no YFP signal was detected in any of the three negative control groups. Similarly, in mesophyll protoplasts, YFP fluorescence was detected in the nucleus of cells co-transformed with nYFP-GjNPR1 and cYFP-GjTGA2, whereas no YFP signal was observed in the corresponding negative controls. These results further confirmed the interactions between GjSEP and GjPI, and between GjNPR1 and GjTGA2, in G. jasminoides protoplasts.
In addition, BiFC assays were also performed in N. benthamiana leaves to further verify the reliability of the results and efficiency of protoplast assays. The observed fluorescence patterns (Figure 5C) were consistent with those obtained in G. jasminoides protoplasts, further supporting the feasibility and reliability of BiFC analysis in this system.

4. Discussion

At present, enzymatic digestion is the most commonly used method for protoplast isolation [7]. In this study, based on previously reported methods, cellulase R-10 and macerozyme R-10 were selected to isolate protoplasts from G. jasminoides petals and to establish an enzymatic digestion system [23,24]. In addition, auxiliary treatments such as vacuum infiltration, hypertonic pretreatment, and gentle shaking have been reported to accelerate enzymatic digestion and improve protoplast yield [25]. Our results showed that increasing the total enzyme concentration and extending the digestion time could enhance protoplast yield to a certain extent. However, excessively high enzyme concentrations or prolonged digestion times may exert cytotoxic effects on the plasma membrane, thereby reducing protoplast viability. Previous studies have shown that D-mannitol, as an osmotic regulator, can significantly affect both protoplast yield and viability [26]. In the present study, analysis of the effect of mannitol concentration on protoplast isolation demonstrated that 0.5 M D-mannitol significantly improved the yield of G. jasminoides protoplasts. Following enzymatic digestion, purification is required to obtain high-quality protoplasts for transient expression assays. Because the flotation and interface methods are relatively difficult to operate [27,28], centrifugation-based sedimentation was adopted in this study for protoplast purification. During purification, low centrifugation speeds (300–400 rpm for petal protoplasts and 200–300 rpm for mesophyll protoplasts) resulted in substantial protoplast loss, whereas excessively high speeds (600–900 rpm for petal protoplasts and 500–800 rpm for mesophyll protoplasts) caused protoplast rupture and death. Accordingly, a high-quality protoplast isolation system with high viability was established in this study.
PEG-mediated transient transformation of protoplasts is widely used because of its rapidity, low cost, robustness, high throughput, and lack of requirement for specialized equipment [29]. Previous studies have described high-throughput protoplast systems for analyzing signaling pathways and transcription factors in Arabidopsis thaliana [30]. In the present study, we established, for the first time, a protocol for high-yield isolation of G. jasminoides protoplasts and PEG-mediated transformation of these protoplasts (Figure 6). The successful use of tissue culture-derived materials highlights the importance of a controlled sterile environment for obtaining uniform starting materials with high viability. This observation is consistent with the general view that young tissues possess easily degradable cell walls and are subject to less interference from secondary metabolites. Protoplast transient expression systems have now been widely applied in plant molecular and cellular biology. Previous studies have shown that PEG4000 concentration, as well as the amount and concentration of plasmid DNA, can markedly affect transformation efficiency in plant protoplasts [31,32]. Our results showed that transformation efficiency initially increased with increasing PEG4000 concentration. However, when the PEG concentration reached 20% for petal protoplasts and 40% for mesophyll protoplasts, the number of ruptured protoplasts increased and transformation efficiency declined. In addition, higher plasmid DNA input generally resulted in higher transformation efficiency, consistent with previous findings in protoplasts from other plant species [24,29]. Taken together, these results indicate that an effective PEG-mediated transient expression system was successfully established for both petal and mesophyll protoplasts of G. jasminoides.
Previous studies have shown that members of the SEPALLATA (SEP) subfamily of E-class floral homeotic genes play essential regulatory roles in floral organ development [33]. SEP proteins can interact with proteins encoded by other classes of floral organ identity genes to form higher-order protein complexes involved in floral organ specification and development. In addition, Nonexpressor of Pathogenesis-Related genes 1 (NPR1) and TGACG-binding transcription factor 2 (TGA2) are both closely associated with plant immune responses and play important roles in defense against pathogen invasion, regulation of growth and development, and adaptation to environmental stress [34,35]. In this study, the established transient expression system was applied to the subcellular localization of GjAP3, GjPI, and GjSEP in petal protoplasts, and GjNPR1 and GjTGA2 in mesophyll protoplasts. The observed localization patterns were highly consistent with those obtained by heterologous expression in N. benthamiana, indicating that this system provides a useful platform for assessing subcellular localization of proteins in G. jasminoides. Previous reports have demonstrated interactions between SEP and PISTILLATA (PI) proteins [36], as well as between NPR1 and TGA2 proteins [37]. In the present study, BiFC was successfully applied to G. jasminoides protoplasts for the first time, visually confirming the interactions between GjPI and GjSEP, and between GjNPR1 and GjTGA2. These results were further supported by yeast two-hybrid assays. Together, these application cases provide evidence that the established system can be used for transient functional analysis, such as subcellular localization and protein–protein interaction assays.
So far, to the best of our knowledge, this study is the first to establish a relatively efficient protoplast isolation and transient expression system for G. jasminoides. The transient expression platform established here fills a critical technical gap in the functional genomics of G. jasminoides and related woody species. Its major advantage lies in its efficiency and species-specific applicability: it bypasses the lengthy and difficult process of stable genetic transformation in woody plants and enables rapid verification of gene function directly in G. jasminoides cells, thereby reducing the potential discrepancies associated with heterologous systems. Nevertheless, the transient transformation efficiency of mesophyll protoplasts remained relatively low in this study and protoplast-based transient expression systems still have inherent limitations, including the short duration of exogenous gene expression and the inability to achieve stable genetic inheritance.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/horticulturae12040436/s1, Figure S1: Effect of different pretreatments on G.jasminoides petal protoplasts yield and viability; Figure S2: Optimization of protoplast translation conditions in G. jasminoides; Table S1: Primer sequences.

Author Contributions

Conceptualization, K.C., N.L. and Y.Z.; methodology, K.C., Z.F., C.C. and L.-J.H.; software, C.C. and L.-J.H.; formal analysis, K.C., Z.F. and C.C.; investigation, K.C., Z.F. and C.C.; resources, L.-J.H., W.W., J.H. and Y.Z.; writing—original draft preparation, K.C., Z.F., C.F., Q.Z. and N.L.; writing—review and editing, L.-J.H., Q.Z., P.G.-C. and Y.Z.; visualization, K.C., Z.F., C.C., C.F. and L.-J.H. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by Hunan Provincial Postgraduate Research and Innovation Project (CX20251278).

Data Availability Statement

The original contributions presented in this study are included in the article/Supplementary Materials. Further inquiries can be directed to the corresponding authors.

Conflicts of Interest

The authors declare no conflicts of interest.

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Figure 1. Experimental materials and sample pretreatment methods used for protoplast isolation in G. jasminoides. (A) Representative stages of flower opening and senescence in G. jasminoides. (B) Tissue-cultured seedlings used for mesophyll protoplast isolation. (C) Different petal pretreatment methods, including cutting, scratching, and peeling. (D) Leaf strips prepared by cutting for mesophyll protoplast isolation.
Figure 1. Experimental materials and sample pretreatment methods used for protoplast isolation in G. jasminoides. (A) Representative stages of flower opening and senescence in G. jasminoides. (B) Tissue-cultured seedlings used for mesophyll protoplast isolation. (C) Different petal pretreatment methods, including cutting, scratching, and peeling. (D) Leaf strips prepared by cutting for mesophyll protoplast isolation.
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Figure 2. Effects of enzyme combinations on protoplast yield and viability in G. jasminoides. (A) Effects of different enzyme combinations on the yield and viability of petal protoplasts. (B) Effects of different enzyme combinations on the yield and viability of mesophyll protoplasts. (C) Morphology of petal and mesophyll protoplasts observed under bright-field microscopy and their viability as determined by FDA staining. Scale bar = 100 μm. Bars represent the mean ± SE of three independent experiments. Different letters indicate significant differences at p < 0.05.
Figure 2. Effects of enzyme combinations on protoplast yield and viability in G. jasminoides. (A) Effects of different enzyme combinations on the yield and viability of petal protoplasts. (B) Effects of different enzyme combinations on the yield and viability of mesophyll protoplasts. (C) Morphology of petal and mesophyll protoplasts observed under bright-field microscopy and their viability as determined by FDA staining. Scale bar = 100 μm. Bars represent the mean ± SE of three independent experiments. Different letters indicate significant differences at p < 0.05.
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Figure 3. Optimization of protoplast isolation conditions in G. jasminoides. (AC) Effects of enzymatic digestion time, D-mannitol concentration, and centrifugation speed on the yield and viability of petal protoplasts. (DF) Effects of enzymatic digestion time, D-mannitol concentration, and centrifugation speed on the yield and viability of mesophyll protoplasts. Bars represent the mean ± SE of three independent experiments. Different letters indicate significant differences at p < 0.05.
Figure 3. Optimization of protoplast isolation conditions in G. jasminoides. (AC) Effects of enzymatic digestion time, D-mannitol concentration, and centrifugation speed on the yield and viability of petal protoplasts. (DF) Effects of enzymatic digestion time, D-mannitol concentration, and centrifugation speed on the yield and viability of mesophyll protoplasts. Bars represent the mean ± SE of three independent experiments. Different letters indicate significant differences at p < 0.05.
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Figure 4. Subcellular localization of different proteins in G. jasminoides protoplasts. (A) Recombinant vectors GFP-GjAP3, GFP-GjPI, and GFP-GjSEP were transiently expressed in G. jasminoides petal protoplasts, whereas GFP-GjNPR1 and GFP-GjTGA2 were transiently expressed in mesophyll protoplasts. The empty GFP vector was used as a control. (B) Parallel subcellular localization analysis in N. benthamiana leaves showing results consistent with those observed in G. jasminoides protoplasts. Scale bars = 20 μm.
Figure 4. Subcellular localization of different proteins in G. jasminoides protoplasts. (A) Recombinant vectors GFP-GjAP3, GFP-GjPI, and GFP-GjSEP were transiently expressed in G. jasminoides petal protoplasts, whereas GFP-GjNPR1 and GFP-GjTGA2 were transiently expressed in mesophyll protoplasts. The empty GFP vector was used as a control. (B) Parallel subcellular localization analysis in N. benthamiana leaves showing results consistent with those observed in G. jasminoides protoplasts. Scale bars = 20 μm.
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Figure 5. Verification of protein–protein interactions in G. jasminoides using yeast two-hybrid and bimolecular fluorescence complementation (BiFC) assays. (A) Yeast two-hybrid analysis of the interactions between GjSEP and GjPI, and between GjNPR1 and GjTGA2. (B) BiFC analysis in N. benthamiana leaves used as a heterologous control, showing localization patterns consistent with those observed in G. jasminoides protoplasts. (C) BiFC analysis in G. jasminoides protoplasts showing nuclear interaction signals. The top four lines is for GjSEP and GjPI in petal protoplasts and the last four lines is for GjNPR1 and GjTGA2 in mesophyll protoplasts. Scale bars = 20 μm.
Figure 5. Verification of protein–protein interactions in G. jasminoides using yeast two-hybrid and bimolecular fluorescence complementation (BiFC) assays. (A) Yeast two-hybrid analysis of the interactions between GjSEP and GjPI, and between GjNPR1 and GjTGA2. (B) BiFC analysis in N. benthamiana leaves used as a heterologous control, showing localization patterns consistent with those observed in G. jasminoides protoplasts. (C) BiFC analysis in G. jasminoides protoplasts showing nuclear interaction signals. The top four lines is for GjSEP and GjPI in petal protoplasts and the last four lines is for GjNPR1 and GjTGA2 in mesophyll protoplasts. Scale bars = 20 μm.
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Figure 6. Schematic diagram of the isolation, purification, and transient expression analysis of G. jasminoides protoplasts. Plant tissues were collected and cut into small pieces, followed by enzymatic digestion to release protoplasts. The digested suspension was then centrifuged to collect protoplasts, which were subsequently resuspended and purified. After PEG-mediated transient transformation with recombinant plasmids, the transformed protoplasts were incubated and finally observed under a fluorescence microscope for signal detection and imaging.
Figure 6. Schematic diagram of the isolation, purification, and transient expression analysis of G. jasminoides protoplasts. Plant tissues were collected and cut into small pieces, followed by enzymatic digestion to release protoplasts. The digested suspension was then centrifuged to collect protoplasts, which were subsequently resuspended and purified. After PEG-mediated transient transformation with recombinant plasmids, the transformed protoplasts were incubated and finally observed under a fluorescence microscope for signal detection and imaging.
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Chen, K.; Feng, Z.; Cui, C.; Wang, W.; Huang, L.-J.; Fu, C.; Zhao, Q.; Garcia-Caparros, P.; Huang, J.; Li, N.; et al. A Protoplast-Based Transient Expression System for Rapid Gene Functional Analysis in Gardenia jasminoides. Horticulturae 2026, 12, 436. https://doi.org/10.3390/horticulturae12040436

AMA Style

Chen K, Feng Z, Cui C, Wang W, Huang L-J, Fu C, Zhao Q, Garcia-Caparros P, Huang J, Li N, et al. A Protoplast-Based Transient Expression System for Rapid Gene Functional Analysis in Gardenia jasminoides. Horticulturae. 2026; 12(4):436. https://doi.org/10.3390/horticulturae12040436

Chicago/Turabian Style

Chen, Kebin, Zeyu Feng, Chuantong Cui, Wei Wang, Li-Jun Huang, Chenrui Fu, Qiuyuan Zhao, Pedro Garcia-Caparros, Jianhua Huang, Ning Li, and et al. 2026. "A Protoplast-Based Transient Expression System for Rapid Gene Functional Analysis in Gardenia jasminoides" Horticulturae 12, no. 4: 436. https://doi.org/10.3390/horticulturae12040436

APA Style

Chen, K., Feng, Z., Cui, C., Wang, W., Huang, L.-J., Fu, C., Zhao, Q., Garcia-Caparros, P., Huang, J., Li, N., & Zeng, Y. (2026). A Protoplast-Based Transient Expression System for Rapid Gene Functional Analysis in Gardenia jasminoides. Horticulturae, 12(4), 436. https://doi.org/10.3390/horticulturae12040436

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