Characterization of Escherichia coli in Dogs with Pyometra and the Influence of Diet on the Intestinal Colonization of Extraintestinal Pathogenic E. coli (ExPEC)
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sampling
2.2. Isolation and Identification of E. coli
2.3. Characterization of E. coli
2.4. Statistical Analysis
3. Results
3.1. E. coli Isolation
3.2. E. coli Phylogroups
3.3. Frequency of Virulence Genes Associated with the ExPEC Pathotype
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
- Hagman, R. Pyometra in Small Animals. Vet. Clin. Small Anim. Pract. 2018, 48, 639–661. [Google Scholar] [CrossRef]
- Hagman, R. Pyometra in Small Animals 2.0. Vet. Clin. N. Am. Small Anim. Pract. 2022, 52, 631–657. [Google Scholar] [CrossRef] [PubMed]
- Fieni, F.; Topie, E.; Gogny, A. Medical Treatment for Pyometra in Dogs. Reprod. Domest. Anim. 2014, 49, 28–32. [Google Scholar] [CrossRef] [Green Version]
- Jitpean, S.; Ström-Holst, B.; Emanuelson, U.; Höglund, O.V.; Pettersson, A.; Alneryd-Bull, C.; Hagman, R. Outcome of Pyometra in Female Dogs and Predictors of Peritonitis and Prolonged Postoperative Hospitalization in Surgically Treated Cases. BMC Vet. Res. 2014, 10, 6. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Müştak, H.K.; Günaydin, E.; Kaya, İ.B.; Salar, M.Ö.; Babacan, O.; Önat, K.; Ata, Z.; Diker, K.S. Phylo-Typing of Clinical Escherichia Coli Isolates Originating from Bovine Mastitis and Canine Pyometra and Urinary Tract Infection by Means of Quadruplex PCR. Vet. Q. 2015, 35, 194–199. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Chen, Y.M.M.; Wright, P.J.; Lee, C.-S.; Browning, G.F. Uropathogenic Virulence Factors in Isolates of Escherichia Coli from Clinical Cases of Canine Pyometra and Feces of Healthy Bitches. Vet. Microbiol. 2003, 94, 57–69. [Google Scholar] [CrossRef]
- Lopes, C.E.; De Carli, S.; Riboldi, C.I.; De Lorenzo, C.; Panziera, W.; Driemeier, D.; Siqueira, F.M. Pet Pyometra: Correlating Bacteria Pathogenicity to Endometrial Histological Changes. Pathogens 2021, 10, 833. [Google Scholar] [CrossRef]
- Tenaillon, O.; Skurnik, D.; Picard, B.; Denamur, E. The Population Genetics of Commensal Escherichia Coli. Nat. Rev. Microbiol. 2010, 8, 207–217. [Google Scholar] [CrossRef]
- Coura, F.M.; Diniz, A.N.; Oliveira Junior, C.A.; Lage, A.P.; Lobato, F.C.F.; Heinemann, M.B.; Silva, R.O.S.; Coura, F.M.; Diniz, A.N.; Oliveira Junior, C.A.; et al. Detection of Virulence Genes and the Phylogenetic Groups of Escherichia Coli Isolated from Dogs in Brazil. Ciência Rural 2018, 48, 2. [Google Scholar] [CrossRef] [Green Version]
- Abdallah, K.S.; Cao, Y.; Wei, D.-J. Epidemiologic Investigation of Extra-Intestinal Pathogenic E. Coli (ExPEC) Based on PCR Phylogenetic Group and FimH Single Nucleotide Polymorphisms (SNPs) in China. Int. J. Mol. Epidemiol. Genet. 2011, 2, 339–353. [Google Scholar]
- Mateus, L.; Henriques, S.; Merino, C.; Pomba, C.; Lopes da Costa, L.; Silva, E. Virulence Genotypes of Escherichia Coli Canine Isolates from Pyometra, Cystitis and Fecal Origin. Vet. Microbiol. 2013, 166, 590–594. [Google Scholar] [CrossRef] [PubMed]
- Liu, X.; Liu, H.; Li, Y.; Hao, C. Association between Virulence Profile and Fluoroquinolone Resistance in Escherichia Coli Isolated from Dogs and Cats in China. J. Infect. Dev. Ctries. 2017, 11, 306–313. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Lopes, C.E.; De Carli, S.; Weber, M.N.; Fonseca, A.C.V.; Tagliari, N.J.; Foresti, L.; Cibulski, S.P.; Mayer, F.Q.; Canal, C.W.; Siqueira, F.M. Insights on the Genetic Features of Endometrial Pathogenic Escherichia Coli Strains from Pyometra in Companion Animals: Improving the Knowledge about Pathogenesis. Infect. Genet. Evol. 2020, 85, 104453. [Google Scholar] [CrossRef]
- Henriques, S.; Silva, E.; Silva, M.F.; Carvalho, S.; Diniz, P.; Lopes-da-Costa, L.; Mateus, L. Immunomodulation in the Canine Endometrium by Uteropathogenic Escherichia Coli. Vet. Res. 2016, 47, 114. [Google Scholar] [CrossRef] [PubMed]
- Maluta, R.P.; Borges, C.A.; Beraldo, L.G.; Cardozo, M.V.; Voorwald, F.A.; Santana, A.M.; Rigobelo, E.C.; Toniollo, G.H.; Ávila, F.A. Frequencies of Virulence Genes and Pulse Field Gel Electrophoresis Fingerprints in Escherichia Coli Isolates from Canine Pyometra. Vet. J. 2014, 202, 393–395. [Google Scholar] [CrossRef] [PubMed]
- Salipante, S.J.; Roach, D.J.; Kitzman, J.O.; Snyder, M.W.; Stackhouse, B.; Butler-Wu, S.M.; Lee, C.; Cookson, B.T.; Shendure, J. Large-Scale Genomic Sequencing of Extraintestinal Pathogenic Escherichia Coli Strains. Genome Res. 2015, 25, 119–128. [Google Scholar] [CrossRef] [Green Version]
- Russo, T.A.; Johnson, J.R. Proposal for a New Inclusive Designation for Extraintestinal Pathogenic Isolates of Escherichia Coli: ExPEC. J. Infect. Dis. 2000, 181, 1753–1754. [Google Scholar] [CrossRef] [Green Version]
- Siqueira, A.K.; Ribeiro, M.G.; da S Leite, D.; Tiba, M.R.; de Moura, C.; Lopes, M.D.; Prestes, N.C.; Salerno, T.; da Silva, A.V. Virulence Factors in Escherichia Coli Strains Isolated from Urinary Tract Infection and Pyometra Cases and from Feces of Healthy Dogs. Res. Vet. Sci. 2009, 86, 206–210. [Google Scholar] [CrossRef]
- Viegas, F.M.; Ramos, C.P.; Xavier, R.G.C.; Lopes, E.O.; Júnior, C.A.O.; Bagno, R.M.; Diniz, A.N.; Lobato, F.C.F.; Silva, R.O.S. Fecal Shedding of Salmonella Spp., Clostridium Perfringens, and Clostridioides Difficile in Dogs Fed Raw Meat-Based Diets in Brazil and Their Owners’ Motivation. PLoS ONE 2020, 15, e0231275. [Google Scholar] [CrossRef] [Green Version]
- Kim, J.; An, J.-U.; Kim, W.; Lee, S.; Cho, S. Differences in the Gut Microbiota of Dogs (Canis Lupus Familiaris) Fed a Natural Diet or a Commercial Feed Revealed by the Illumina MiSeq Platform. Gut Pathog. 2017, 9, 68. [Google Scholar] [CrossRef] [Green Version]
- Davies, R.H.; Lawes, J.R.; Wales, A.D. Raw Diets for Dogs and Cats: A Review, with Particular Reference to Microbiological Hazards. J. Small Anim. Pract. 2019, 60, 329–339. [Google Scholar] [CrossRef] [PubMed]
- McDaniels, A.E.; Rice, E.W.; Reyes, A.L.; Johnson, C.H.; Haugland, R.A.; Stelma, G.N. Confirmational Identification of Escherichia Coli, a Comparison of Genotypic and Phenotypic Assays for Glutamate Decarboxylase and Beta-D-Glucuronidase. Appl. Environ. Microbiol. 1996, 62, 3350–3354. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Clermont, O.; Christenson, J.K.; Denamur, E.; Gordon, D.M. The Clermont Escherichia Coli Phylo-Typing Method Revisited: Improvement of Specificity and Detection of New Phylo-Groups. Environ. Microbiol. Rep. 2013, 5, 58–65. [Google Scholar] [CrossRef] [PubMed]
- Johnson, J.R.; Stell, A.L. Extended Virulence Genotypes of Escherichia Coli Strains from Patients with Urosepsis in Relation to Phylogeny and Host Compromise. J. Infect. Dis. 2000, 181, 261–272. [Google Scholar] [CrossRef] [Green Version]
- MoreSteam Multiple Proportions Test. Available online: https://moresteam.com/help/engineroom/multiple-proportions-test (accessed on 10 April 2022).
- Marascuilo, L.A. Large-Sample Multiple Comparisons. Psychol. Bull. 1966, 65, 280–290. [Google Scholar] [CrossRef]
- Castillo, J.M.; Dockweiler, J.C.; Cheong, S.H.; de Amorim, M.D. Pyometra and Unilateral Uterine Horn Torsion in a Sheep. Reprod. Domest. Anim. 2018, 53, 274–277. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Rainey, B.; Singh, A.; Valverde, A.; Hoddinott, K.; Beaufrère, H.; Tindal, L.; Smith, D. Laparoscopic-Assisted Ovariohysterectomy for the Treatment of Pyometra in a Bengal Tiger (Panthera Tigris Tigris). Can. Vet. J. 2018, 59, 895–898. [Google Scholar]
- Clermont, O.; Gordon, D.; Denamur, E. Guide to the Various Phylogenetic Classification Schemes for Escherichia Coli and the Correspondence among Schemes. Microbiology 2015, 161, 980–988. [Google Scholar] [CrossRef]
- Schmidt, V.M.; Pinchbeck, G.L.; Nuttall, T.; McEwan, N.; Dawson, S.; Williams, N.J. Antimicrobial Resistance Risk Factors and Characterisation of Faecal E. Coli Isolated from Healthy Labrador Retrievers in the United Kingdom. Prev. Vet. Med. 2015, 119, 31–40. [Google Scholar] [CrossRef] [Green Version]
- Henriques, S.; Silva, E.; Lemsaddek, A.; Lopes-da-Costa, L.; Mateus, L. Genotypic and Phenotypic Comparison of Escherichia Coli from Uterine Infections with Different Outcomes: Clinical Metritis in the Cow and Pyometra in the Bitch. Vet. Microbiol. 2014, 170, 109–116. [Google Scholar] [CrossRef]
- Krekeler, N.; Marenda, M.S.; Browning, G.F.; Holden, K.M.; Charles, J.A.; Wright, P.J. Uropathogenic Virulence Factor FimH Facilitates Binding of Uteropathogenic Escherichia Coli to Canine Endometrium. Comp. Immunol. Microbiol. Infect. Dis. 2012, 35, 461–467. [Google Scholar] [CrossRef] [PubMed]
- Agostinho, J.M.A.; de Souza, A.; Schocken-Iturrino, R.P.; Beraldo, L.G.; Borges, C.A.; Ávila, F.A.; Marin, J.M. Escherichia Coli Strains Isolated from the Uteri Horn, Mouth, and Rectum of Bitches Suffering from Pyometra: Virulence Factors, Antimicrobial Susceptibilities, and Clonal Relationships among Strains. Int. J. Microbiol. 2014, 2014, 979584. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Krekeler, N.; Marenda, M.S.; Browning, G.F.; Holden, K.M.; Charles, J.A.; Wright, P.J. The Role of Type 1, P and S Fimbriae in Binding of Escherichia Coli to the Canine Endometrium. Vet. Microbiol. 2013, 164, 399–404. [Google Scholar] [CrossRef] [PubMed]
- Wotzka, S.Y.; Kreuzer, M.; Maier, L.; Arnoldini, M.; Nguyen, B.; Brachmann, A.O.; Berthold, D.L.; Zünd, M.; Hausmann, A.; Bakkeren, E.; et al. Escherichia Coli Limits Salmonella Typhimurium Infections after Diet-Shifts and Fat-Mediated Microbiota Perturbation in Mice. Nat. Microbiol. 2019, 4, 2164–2174. [Google Scholar] [CrossRef]
- Kreuzer, M.; Hardt, W.-D. How Food Affects Colonization Resistance Against Enteropathogenic Bacteria. Annu. Rev. Microbiol. 2020, 74, 787–813. [Google Scholar] [CrossRef]
- Ghanbarpour, R.; Akhtardanesh, B. Genotype and Antibiotic Resistance Profile of Escherichia Coli Strains Involved in Canine Pyometra. Comp. Clin. Pathol. 2012, 21, 737–744. [Google Scholar] [CrossRef]
- Coggan, J.A.; Melville, P.A.; de Oliveira, C.M.; Faustino, M.; Moreno, A.M.; Benites, N.R. Microbiological and Histopathological Aspects of Canine Pyometra. Braz. J. Microbiol. 2008, 39, 477–483. [Google Scholar] [CrossRef] [Green Version]
- Dale, A.P.; Woodford, N. Extra-Intestinal Pathogenic Escherichia Coli (ExPEC): Disease, Carriage and Clones. J. Infect. 2015, 71, 615–626. [Google Scholar] [CrossRef] [Green Version]
- Etefia, E.U.; Ben, S.A. Virulence Markers, Phylogenetic Evolution, and Molecular Techniques of Uropathogenic Escherichia Coli. J. Nat. Sci. Med. 2020, 3, 13. [Google Scholar] [CrossRef]
- Hagman, R. Canine Pyometra: What Is New? Reprod. Domest. Anim. 2017, 52, 288–292. [Google Scholar] [CrossRef] [Green Version]
- Freeman, L.M.; Chandler, M.L.; Hamper, B.A.; Weeth, L.P. Current Knowledge about the Risks and Benefits of Raw Meat–Based Diets for Dogs and Cats. J. Am. Vet. Med. Assoc. 2013, 243, 1549–1558. [Google Scholar] [CrossRef] [PubMed] [Green Version]
Organism | Total Cases (%) |
---|---|
Escherichia coli | 40 (56) |
Staphylococcus sp. | 6 (8) |
Streptococcus sp. | 6 (8) |
Enterobacter sp. | 2 (3) |
Enterococcus sp. | 2 (3) |
Klebsiella pneumoniae | 2 (3) |
Proteus mirabilis | 2 (3) |
Pseudomonas aeruginosa | 1 (1) |
No growth | 11 (15) |
Total | 72 (100) |
Bitches with Pyometra | Healthy Dogs | ||||
---|---|---|---|---|---|
Uterine Content | Rectal Swab | ||||
Phylogroup | E. coli Pyometra | E. coli Pyometra | Non-E. coli Pyometra | Consume Commercial Dry Feed | Consume RMBD |
A | 0 | 2 (1.9%) | 5 (6.6%) | 4 (3%) | 6 (7%) |
B1 | 3 (2.5%) | 22 (21.5%) | 31 (41.3%) | 35 (26.9%) | 29 (34.1%) |
B2 | 102 (85%) | 60 (58.8%) a | 18 (24%) | 45 (34.6%) b | 8 (9.4%) |
C | 0 | 4 (3.9%) | 0 | 16 (12.3%) | 11 (12.9%) |
D | 0 | 0 | 2 (2.6%) | 1 (0.7%) | 0 |
E | 6 (5%) | 7 (6.8%) | 6 (8%) | 10 (7.6%) | 20 (23.5%) |
F | 3 (2.5%) | 3 (2.9%) | 10 (13.3%) | 11 (8.4%) | 10 (11.7%) |
E. clades—clade I | 0 | 0 | 0 | 3 (2.3%) | 0 |
Not classified | 6 (5%) | 4 (3.9%) | 3 (4%) | 5 (3.8%) | 1 (1.1%) |
Total | 120 | 102 | 75 | 130 | 85 |
Bitches with Pyometra | Healthy Dogs | ||||
---|---|---|---|---|---|
Uterine Content | Rectal Swab | ||||
Virulence Genes | E. coli Pyometra | E. coli Pyometra | Non-E. coli Pyometra | Consume Commercial Dry Feed | Consume RMBD |
Adhesion | |||||
fimH | 120 (100%) | 102 (100%) | 75 (100%) | 128 (98.4%) | 83 (97.6%) |
focG | 66 (55%) | 56 (54.9%) | 25 (33.3%) | 47 (36.2%) b | 15 (17.6%) |
papC | 66 (55%) | 45 (44.1%) a | 16 (21.3%) | 38 (29.2%) | 14 (16.4%) |
papG | 58 (48.3%) | 36 (35.2%) | 13 (17.3%) | 74 (56.9%) | 37 (43.5%) |
sfaS | 27 (22.5%) | 16 (15.6%) | 4 (5.3%) | 26 (20%) b | 1 (1.1%) |
Toxins | |||||
cnf1 | 50 (41.6%) | 33 (32.3%) | 14 (18.6%) | 20 (15.3%) | 9 (10.5%) |
hlyA | 61 (50.8%) | 40 (39.2%) a | 13 (17.3%) | 22 (16.9%) | 10 (11.7%) |
usp | 48 (40%) | 28 (27.4%) a | 4 (5.3%) | 16 (12.3%) | 5 (5.8%) |
Iron acquisition | |||||
iutA | 43 (35.8%) | 39 (38.2%) | 26 (34.6%) | 103 (79.2%) | 74 (87%) |
Serum resistance | |||||
traT | 76 (63.3%) | 57 (55.8%) | 48 (64%) | 91 (70%) | 84 (98.8%) b |
Total | 120 | 102 | 75 | 130 | 85 |
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations. |
© 2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Share and Cite
Xavier, R.G.C.; da Silva, P.H.S.; Trindade, H.D.; Carvalho, G.M.; Nicolino, R.R.; Freitas, P.M.C.; Silva, R.O.S. Characterization of Escherichia coli in Dogs with Pyometra and the Influence of Diet on the Intestinal Colonization of Extraintestinal Pathogenic E. coli (ExPEC). Vet. Sci. 2022, 9, 245. https://doi.org/10.3390/vetsci9050245
Xavier RGC, da Silva PHS, Trindade HD, Carvalho GM, Nicolino RR, Freitas PMC, Silva ROS. Characterization of Escherichia coli in Dogs with Pyometra and the Influence of Diet on the Intestinal Colonization of Extraintestinal Pathogenic E. coli (ExPEC). Veterinary Sciences. 2022; 9(5):245. https://doi.org/10.3390/vetsci9050245
Chicago/Turabian StyleXavier, Rafael Gariglio Clark, Paloma Helena Sanches da Silva, Hanna Dornelas Trindade, Gabriela Muniz Carvalho, Rafael Romero Nicolino, Patrícia Maria Coletto Freitas, and Rodrigo Otávio Silveira Silva. 2022. "Characterization of Escherichia coli in Dogs with Pyometra and the Influence of Diet on the Intestinal Colonization of Extraintestinal Pathogenic E. coli (ExPEC)" Veterinary Sciences 9, no. 5: 245. https://doi.org/10.3390/vetsci9050245
APA StyleXavier, R. G. C., da Silva, P. H. S., Trindade, H. D., Carvalho, G. M., Nicolino, R. R., Freitas, P. M. C., & Silva, R. O. S. (2022). Characterization of Escherichia coli in Dogs with Pyometra and the Influence of Diet on the Intestinal Colonization of Extraintestinal Pathogenic E. coli (ExPEC). Veterinary Sciences, 9(5), 245. https://doi.org/10.3390/vetsci9050245