A Multiplex PCR Assay for Simultaneous Detection of Giardia duodenalis, Cryptosporidium parvum, Blastocystis spp. and Enterocytozoon bieneusi in Goats
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Clinical Samples and Parasite DNA
2.2. Genomic DNA Extraction
2.3. Primer Design
2.4. Construction of the Standard Plasmids
2.5. Singleplex PCR Assays
2.6. Multiplex PCR Assay
2.7. Sensitivity and Specificity
2.8. Analysis of the Clinical Samples
3. Results
3.1. Multiplex PCR Assay Results
3.2. Sensitivity and Specificity
3.3. Field Evaluation of Multiplex PCR Assay
3.4. Statistical Analysis
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Parasite | Target (GenBank Accession) | Primer Sequence (5′-3′) | Fragment Size (bp) |
---|---|---|---|
G. duodenalis | VSP with INR (XM_001710026.2) | F: CCTGTGCTTAAGTTCCGACG | 1400 |
R: CGGTACTGCTAGCACATTCC | |||
C. parvum | SSU rRNA (XM_626998.1) | F: GCTCTTGGACCTTGGAAAACG | 755 |
R: GCTCGTCCATACCTTCAATCC | |||
Blastocystis spp. | SSU rRNA (AB071000.1) | F: GCCCTATCAGCTTTGGATGG | 573 |
R: GAATACCCCCAACTGTCCCT | |||
E. bieneusi | 18S rRNA (KJ719492.1) | F: CAAGAGTGTCTATGGTGGATGC | 314 |
R: CGAACACTAAGATTTCCCCGC |
Parasite | True Positive | False Negative | True Negative | False Positive | Sensitivity (%) | Specificity (%) | Positive Predictive Value (%) | Negative Predictive Value (%) |
---|---|---|---|---|---|---|---|---|
G. duodenalis | 30 | 0 | 120 | 0 | 100 | 100 | 100 | 100 |
E.bieneusi | 16 | 0 | 134 | 0 | 100 | 100 | 100 | 100 |
C. parvum | 32 | 0 | 118 | 0 | 100 | 100 | 100 | 100 |
Blastocystis spp. | 54 | 0 | 96 | 0 | 100 | 100 | 100 | 100 |
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Yu, X.; Xu, H.; Mu, X.; Yuan, K.; Li, Y.; Xu, N.; Li, Q.; Zeng, W.; Chen, S.; Hong, Y. A Multiplex PCR Assay for Simultaneous Detection of Giardia duodenalis, Cryptosporidium parvum, Blastocystis spp. and Enterocytozoon bieneusi in Goats. Vet. Sci. 2024, 11, 448. https://doi.org/10.3390/vetsci11090448
Yu X, Xu H, Mu X, Yuan K, Li Y, Xu N, Li Q, Zeng W, Chen S, Hong Y. A Multiplex PCR Assay for Simultaneous Detection of Giardia duodenalis, Cryptosporidium parvum, Blastocystis spp. and Enterocytozoon bieneusi in Goats. Veterinary Sciences. 2024; 11(9):448. https://doi.org/10.3390/vetsci11090448
Chicago/Turabian StyleYu, Xingang, Hui Xu, Xuanru Mu, Kaijian Yuan, Yilong Li, Nuo Xu, Qiaoyu Li, Wenjing Zeng, Shengfeng Chen, and Yang Hong. 2024. "A Multiplex PCR Assay for Simultaneous Detection of Giardia duodenalis, Cryptosporidium parvum, Blastocystis spp. and Enterocytozoon bieneusi in Goats" Veterinary Sciences 11, no. 9: 448. https://doi.org/10.3390/vetsci11090448
APA StyleYu, X., Xu, H., Mu, X., Yuan, K., Li, Y., Xu, N., Li, Q., Zeng, W., Chen, S., & Hong, Y. (2024). A Multiplex PCR Assay for Simultaneous Detection of Giardia duodenalis, Cryptosporidium parvum, Blastocystis spp. and Enterocytozoon bieneusi in Goats. Veterinary Sciences, 11(9), 448. https://doi.org/10.3390/vetsci11090448