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Article

Predicting Major Depressive Disorder Using Neural Networks from Spectral Measures of EEG Data

1
Faculty of Information Technologies and Mechanical-Mathematical Faculty, Novosibirsk State University, 630090 Novosibirsk, Russia
2
Institute of Computational Mathematics and Mathematical Geophysics SB RAS, 630090 Novosibirsk, Russia
3
Scientific Research Institute of Neurosciences and Medicine, 630117 Novosibirsk, Russia
*
Author to whom correspondence should be addressed.
Bioengineering 2025, 12(11), 1251; https://doi.org/10.3390/bioengineering12111251
Submission received: 29 September 2025 / Revised: 4 November 2025 / Accepted: 11 November 2025 / Published: 16 November 2025

Abstract

Processing electroencephalogram (EEG) data using neural networks is becoming increasingly important in modern medicine. This study introduces the development of a neural network method using a combination of psychological questionnaire data and spectral characteristics of resting-state EEG. The data were collected from 71 individuals: 42 healthy and 29 with major depressive disorder (MDD). We evaluated four classes of algorithms—traditional machine learning, deep learning (LSTM), ablation analysis, and feature importance analysis—for two primary tasks: binary classification (healthy vs. MDD) and regression for predicting Beck Depression Inventory scores (BDI). Our results demonstrate that the superiority of a given method is task-dependent. For regression, an LSTM network applied to delta-rhythm EEG data achieved a breakthrough performance of R2 = 0.742 (MAE = 6.114), representing an 86% improvement over traditional Ridge regression. Ablation studies identified delta and alpha rhythms as the most informative neurophysiological biomarkers. Furthermore, feature importance analysis revealed a triad of dominant psychometric predictors: ruminative thinking (31.2%), age (27.9%), and hostility (18.5%), which collectively accounted for 75.2% of the feature importance in predicting severity. LSTM on spectral EEG data provides a superior quantitative assessment of depression severity, while Logistic Regression on psychometric or EEG data offers a highly reliable tool for screening and confirmatory diagnosis. This methodology provides a robust, objective framework for MDD diagnosis that is independent of a patient’s subjective self-assessment, thus facilitating enhanced clinical decision-making and personalized treatment monitoring.
Keywords: EEG; machine learning; artificial neural networks; major depressive disorder EEG; machine learning; artificial neural networks; major depressive disorder
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MDPI and ACS Style

Kozulin, I.; Merkulova, E.; Savostyanov, V.; Shi, H.; Wang, X.; Bocharov, A.; Savostyanov, A. Predicting Major Depressive Disorder Using Neural Networks from Spectral Measures of EEG Data. Bioengineering 2025, 12, 1251. https://doi.org/10.3390/bioengineering12111251

AMA Style

Kozulin I, Merkulova E, Savostyanov V, Shi H, Wang X, Bocharov A, Savostyanov A. Predicting Major Depressive Disorder Using Neural Networks from Spectral Measures of EEG Data. Bioengineering. 2025; 12(11):1251. https://doi.org/10.3390/bioengineering12111251

Chicago/Turabian Style

Kozulin, Igor, Ekaterina Merkulova, Vasiliy Savostyanov, Haonan Shi, Xinyi Wang, Andrey Bocharov, and Alexander Savostyanov. 2025. "Predicting Major Depressive Disorder Using Neural Networks from Spectral Measures of EEG Data" Bioengineering 12, no. 11: 1251. https://doi.org/10.3390/bioengineering12111251

APA Style

Kozulin, I., Merkulova, E., Savostyanov, V., Shi, H., Wang, X., Bocharov, A., & Savostyanov, A. (2025). Predicting Major Depressive Disorder Using Neural Networks from Spectral Measures of EEG Data. Bioengineering, 12(11), 1251. https://doi.org/10.3390/bioengineering12111251

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