1. Introduction
The potato (
Solanum tuberosum L.) is an herbaceous plant belonging to the
Solanaceae family and is considered one of the world’s most important food crops. It serves as a major staple food that plays a substantial role in feeding the world’s growing population [
1]. It is currently cultivated in more than 100 countries on an estimated 16.8 million hectares of farmland, and 383 million tonnes of potatoes were produced globally in 2023 (The Food and Agriculture Organization’s database, updated in late December 2024). Argentina produces approximately 2.8 million tonnes, allocating approximately 75–80 thousand hectares to potato cultivation. Potatoes are the most widely consumed vegetable in the country, and their consumption has shown a positive trend over the years [
2]. The main variety of potato grown and marketed in Argentina for fresh consumption is Spunta, while the Kennebec variety is important in terms of industrial production, as it contains between 18 and 19% dry matter and is suitable for making sticks and puree [
2]. Spunta and Kennebec potato varieties differ in their yield, with Kennebec generally showing higher overall yield and better performance under stress conditions, whereas Spunta is more responsive to external factors like biostimulants, which can increase tuber numbers [
3].
Virus infections are a major threat to potato production since they can significantly decrease not only yield but also tuber quality. To date, approximately fifty viruses and one viroid have been reported to naturally infect
S. tuberosum [
4]. Among them,
Potato virus Y (PVY, genus
Potyvirus, family
Potyviridae) and
Potato leafroll virus (PLRV, genus
Polerovirus, family
Solemoviridae) are the most important and damaging potato viruses in the world [
4]. Both are transmitted by aphids (in a non-persistent or persistent manner, respectively) and are prevalent in most potato-growing areas in the world [
5,
6,
7]. PVY can reduce total yield and marketable yield by 49% and 65%, respectively [
8]. Similarly, PLRV-infected seed tubers were reported to result in losses in total yield of 60% and in marketable tuber yield of 88% [
8]. Of note, studies from China, the world’s largest potato-producing country, showed that co-infection of PVY and PLRV causes much greater yield loss than single PVY or PLRV infections [
7]. Moreover, there are reports of mixed PVY and PLRV infections in potatoes worldwide [
9]. Both viruses coexist stably in nature, causing additive or synergistic effects on crop growth and productivity, thereby highlighting the importance of using virus-free seed potatoes or resistant varieties to reduce the impact of such infections [
10].
Natural complete resistance to PVY and PLRV has not been incorporated, to date, in actual commercial potato cultivars [
6,
11,
12,
13,
14]. Despite the paucity of sources of complete resistance [
15], potato breeders have introduced different types and sources of resistance to PVY and PLRV, originally identified in wild
Solanum germplasm, into some potato cultivars [
16,
17,
18,
19,
20]. Nevertheless, introgression is a laborious process, and, to date, many commercial cultivars remain susceptible. Consequently, at present, potato producers mostly manage diseases caused by PVY and PLRV using certified seeds whose main constraint is the high cost, and/or by insecticide applications with the entailing economic and environmental concerns [
21,
22,
23]. Genetic engineering of potatoes to confer virus resistance offers a more sustainable approach with reduced environmental impact. It also overcomes key challenges in conventional breeding, such as the complexity of tetraploid potato genetics and the need for large populations, whilst shortening times and maintaining the elite cultivar genetic background except for the introduced trait [
19,
24].
Capsid protein (CP)-mediated resistance was one of the first transgenic approaches shown to confer virus resistance (or tolerance) in plants [
25]. High levels of resistance have been reported in transgenic plants expressing the CP of several RNA viruses, including tobacco mosaic virus (TMV), potato virus X (PVX), cucumber mosaic virus (CMV), and tobacco rattle virus (TRV), suggesting that CP-mediated resistance may interfere with viral disassembly during infection [
26]. Heterologous protection against several strains of PVY, as well as other potyviruses, can be reached through the expression of the CP of the lettuce mosaic virus (LMV) (CPLMV) in transgenic tobacco plants [
27]. Although this protection was associated with detectable levels of CPLMV accumulation, there was no clear correlation between the level of the protein expression and the degree of protection [
28]. Furthermore, Hassairi et al. [
29] reported similar results in greenhouse evaluations of two potato cultivars transformed with the CPLMV coding sequence. Another strategy for achieving viral resistance involves the RNA silencing mechanism. We have previously developed transgenic lines of the potato cultivar Kennebec expressing ORF2 from an Argentinian PLRV isolate (hereafter referred to as RepPLRV). These lines exhibited resistance to different PLRV isolates, as confirmed by both grafting assays and field trials. Furthermore, the protection mechanism was suggested to be mediated by RNA silencing [
30]. In addition to the detrimental additive effects on crop growth and productivity of mixed infections, the simultaneous presence of multiple viruses poses a significant challenge to the efficacy of RNA silencing as a strategy for viral resistance [
31]. This is because certain viruses encode potent viral suppressors of RNA silencing that compromise the efficiency of this mechanism. Indeed, PVY encodes the Hc-Pro protein, a well-known and strong viral suppressor of RNA. Thus, under natural field conditions, in cases of a mixed infection, PVY could potentially overcome or interfere with engineered resistance against PLRV [
30,
32].
In this context, and with the aim of obtaining transgenic plants stably resistant to PVY and PLRV, our group developed transgenic cv. Kennebec plants expressing the coding sequence for the CPLMV protein as well as the RepPLRV. These transgenic cv. Kennebec potato lines were molecularly and phenotypically characterized, and their resistance to infections caused by both viruses was evaluated. This study represents a significant achievement, demonstrating the successful development of commercially valuable potato lines resistant to both PVY and PLRV, while preserving the agronomic performance of the original cultivar under both greenhouse and field conditions.
3. Discussion
Potato production is significantly affected by viral diseases. More than 50 plant viruses have been reported to infect potatoes [
4], with potato virus Y (PVY) and potato leafroll virus (PLRV) being among the most economically damaging, causing substantial yield and quality losses worldwide [
4,
35,
36]. Plant pathologists and breeders have attempted to control viral diseases using various methods to ensure the production of virus-free seed potatoes. These methods include thermotherapy and tissue culture, specific breeding strategies for seed production and storage, seed potato certification programs, and control of viral vectors using insecticides, biopesticides, and mineral oils. However, as these methods are often ineffective and expensive, the development and use of resistant crop cultivars is the most efficient strategy to mitigate the impact of viral diseases in agricultural settings, particularly in developing countries [
4,
37].
In previous work, we developed transgenic lines of the potato cultivar Kennebec that exhibited resistance to PLRV through the expression of the viral replicase gene (RepPLRV). These lines, including the 2CA2 line, were evaluated through graft inoculation and field trials [
30]. However, because multiple viruses frequently co-infect crops in field conditions, it is essential to engineer resistance to more than one virus simultaneously [
32,
38]. In the present work, to develop stably transgenic potato plants resistant to both PVY and PLRV, transgenic Kennebec plants expressing both the RepPLRV and the capsid protein gene of lettuce mosaic virus (CPLMV), referred to as RY lines, were generated.
First, molecular components potentially involved in the resistance mechanism of the transgenic lines were evaluated. Mapping of sRNAs showed a heterogeneous distribution across the RepPLRV sequence in the RY lines. The high abundance of 21 and 22 nt siRNAs is consistent with PTGS-mediated targeting of this region. On the other hand, given that CP-mediated resistance relies on a direct protein-mediated effect, we analyzed total protein extracts from the RY lines and confirmed high levels of LMV capsid protein expression, with no significant variation among the different transgenic lines. Dinant et al. [
27] and Hassairi et al. [
29] reported that the presence of CPLMV protein is essential for achieving PVY resistance in transgenic tobacco and potato plants, respectively. In line with these findings, the detection of CPLMV protein in our potato lines supports the hypothesis that the strong resistance to PVY observed in lines RY21 and RY25 is mediated by this protein. Moreover, small RNA sequencing analysis revealed a very low number of sRNAs derived from the CPLMV coding sequence (fewer than 30 reads). This suggests that the observed resistance is unlikely to involve RNA silencing mechanisms directed against the viral coat protein RNA. Mechanical inoculation of potato plants with PVY can lead to systemic infection; however, PLRV requires transmission by aphids or grafting to establish systemic infection. Therefore, under controlled greenhouse conditions, we could only evaluate resistance through direct inoculation with PVY. The transgenic lines RY21 and RY25 showed resistance under high infection pressure from mechanical inoculation, whereas control plants consistently exhibited high levels of PVY infection.
Assessment of tuber yield in the RY transgenic candidate lines under greenhouse conditions, performed over multiple years, demonstrates that expression of the RepPLRV and CPLMV transgenes does not affect plant productivity. Subsequent field trials confirmed that this conclusion could be extended to virus-free field conditions in Malargüe, Mendoza Province. Under field evaluations, the transgenic lines RY21 and RY25 also exhibited agronomic performance comparable to that of the non-transgenic Kennebec cultivar from which they were derived. No significant differences between the transgenic plants and the NT control plants in terms of growth, yield, and tuber shape were observed, indicating that RY lines retain the high levels of productivity and the characteristics of the original commercial cultivar. Moreover, these results were confirmed across three additional consecutive planting campaigns conducted in a field in Buenos Aires Province between 2022 and 2024.
The viral resistance of the transgenic potato lines was further evaluated under natural field exposure in a virus-endemic area. RY21 and RY25 lines, together with their non-transgenic Kennebec control, were cultivated in field trials to assess their resistance to PVY and PLRV, and to compare phenotypic and agronomic performance. These evaluations were conducted over two consecutive growing seasons in Tupungato. During the growing season of 2016, RY transgenic plants exhibited complete resistance to both PLRV and PVY under natural field conditions. In contrast, all susceptible (non-transgenic) plants that tested positive for one virus were also co-infected with the other, resulting in an overall infection rate of 23.81%. Interestingly, in all 2CA2-infected plants, the presence of PLRV and PVY was detected. Although the 2CA2 line was previously reported to be resistant to PLRV [
30], the occurrence of infection in this trial may indicate a breakdown of resistance, potentially triggered by co-infection with PVY—a phenomenon previously suggested by Vazquez Rovere et al. [
32]. These findings support the central hypothesis of this study: the coexistence of multiple viruses under natural conditions can compromise RNA silencing-based resistance strategies. Even though PLRV resistance was only validated under natural infection in the field during a single growing season, no tubers from the RY21 or RY25 transgenic lines tested positive for PLRV or PVY. Notably, mixed infection with PVY and PLRV can result in yield losses of up to 95%, severely impacting farmer income. Adoption of dual-resistant potato cultivars could restore most of the potential yield, even if the resistance is not complete; assuming 90% effectiveness, income could increase approximately 17-fold compared with severely infected crops.
During the second field trial in Tupungato (2017 growing season), weather conditions were considerably more favorable than in the previous year. PVY infection was detected in 31.5% of the susceptible control plants, whereas all RY transgenic lines remained completely free of PVY, demonstrating a highly significant level of resistance. Unfortunately, PLRV infection was entirely absent from the field. The field trials in Tupungato were conducted near commercial potato fields where insecticides are routinely applied, possibly at higher intensities during the 2017 season. Such treatments may have disrupted PLRV transmission by killing aphids before they could acquire or transmit the virus during the latent period. However, these insecticides are generally ineffective against PVY transmission, as they do not act quickly enough to prevent the rapid virus transfer by transient aphids [
39]. This situation could therefore explain why PVY, but not PLRV, was detected in susceptible lines during the 2017 field evaluation. In the future, it would be very interesting to determine how the yield of non-transgenic (NT) varieties is affected in comparison to transgenic varieties in a mixed secondary infection, where the more relevant yield losses are expected to occur. In both growing seasons in Tupungato, we were unable to record significant differences in yields, most likely due to the climatic conditions of 2016, the stage of plant growth at the time of infection, and the absence of PLRV in the second season. It is well known that planting infected tubers is historically the cause of “the greatest yield loss in food crops” before the widespread adoption of seed certification.
Kennebec potatoes are a popular and important potato variety due to their versatile culinary uses, fungal disease resistance, and high yield. Although numerous authors obtained immunity against PVY by transgenesis [
29,
40,
41,
42], to our knowledge, this is the first report describing the development of Kennebec transgenic lines highly resistant to PVY. Moreover, in this study, the 2016 field trial demonstrated that the transgenic lines RY21 and RY25 exhibited immunity to PLRV. Remarkably, this resistance was stably maintained after several years of in vitro propagation and through at least three tuber generations. To date, PLRV immunity maintained across clonal generations of
S. tuberosum has only been reported by Orbegozo et al. [
18], who generated transgenic ‘Desiree’ plants expressing a hairpin construct derived from the PLRV coat protein gene. However, these plants were not evaluated in field conditions, where multiple viruses frequently co-infect crops, and this resistance strategy may be susceptible to breakdown, as indicated by our observations of the 2CA2 line in the present study. Compared with current CRISPR-based resistance strategies, the dual-transgene approach described in this study offers distinct and complementary advantages. Although CRISPR/Cas systems have been employed to engineer virus resistance by targeting viral genomes or host susceptibility genes, their application can be constrained by delivery challenges, off-target effects, regulatory uncertainty, and, most critically, the potential emergence of escape mutants [
43,
44]. In contrast, the dual-transgene strategy relies on the stable expression of well-characterized resistance genes, reducing the likelihood of resistance breakdown and limiting viral escape through mutation or host repair mechanisms. Its strong field validation and greater regulatory familiarity further support its continued relevance as a robust and complementary option as CRISPR technologies mature.
It is worth noting that achieving durable resistance to PLRV under field conditions has historically been challenging. In 1988, Kaniewski and Thomas [
45] reported that CP-expressing Russet Burbank plants were the first to exhibit resistance to PLRV; however, the only line that remained un-infected in growth chamber assays became completely infected when exposed to natural field conditions [
46]. This highlights the importance of field evaluations to assess the stability of virus resistance and agronomic performance under natural conditions, which can differ substantially from greenhouse outcomes and are essential for pre-commercial biosafety assessments. Transgenic crops engineered for resistance raise biosafety concerns, particularly regarding the potential transfer of transgenes to wild potato relatives through pollen. Such gene flow may lead to unintended ecological consequences, including the emergence of “superweeds” or disruptions to natural populations. However, a field study conducted in Argentina investigating cross-pollination between cultivated potatoes and wild
Solanum species found no evidence of transgene transfer under natural conditions [
42]. Beyond this experimental evidence, it is well established that, in tetraploid crops such as
S. tuberosum, hybridization with wild diploid relatives typically results in sterility. Furthermore, the potato is, in practical terms, a clonal crop, since multiplication practices of potato seeds are performed by tubers and not by true seeds. Another concern is that transgenic virus-resistant potatoes may exert strong selection pressure on viral populations, potentially accelerating the emergence of resistance-breaking variants. However, evidence suggests that strategically targeting essential viral genes can significantly slow this process [
47], supporting an optimistic outlook for the durability of our transgenic lines. Furthermore, these transgenic lines are well-suited to integration into Integrated Pest Management (IPM) programs, as they reduce dependence on chemical pesticides while complementing existing cultural and chemical control practices. In addition, they may enhance seed certification systems by enabling the production of pathogen-free planting material, although their implementation requires robust and well-defined regulatory frameworks.
Transgenic potato plants simultaneously resistant to PLRV and PVY have been previously obtained, and different levels of tolerance to these viruses have been reported only in greenhouse conditions [
38,
48]. The lack of validation in the field raises questions about the actual performance of viral resistance under natural conditions where viral pressure, environmental variability, and vector dynamics differ substantially from controlled settings. In the present work, data obtained in the experimental field of Tupungato, a virus-endemic zone, showed that total resistance against PLRV and PVY was achieved in transgenic RY lines of
S. tuberosum cv. Kennebec. These findings demonstrate the durability and robustness of this biotechnological strategy, confirming its ability to provide dual viral resistance in real agricultural environments.
4. Materials and Methods
For the construction of the binary vector pZP-Kana-CPLMV-RepPLRV, the plasmid pBS-LMV (provided by INRA Versailles), containing the sequence coding for LMV capsid under the control of the Cauliflower Mosaic virus 35S (CaMV35S) promoter and the nopaline synthase gene terminator (Tnos), was modified by adding the CaMV 2×35S promoter and the rubisco gene terminator (2x35S-Trbs) cassette from the plasmid pKYLX. The complete PLRV-ORF2 sequence from the Argentinian PLRV isolate (PLRV-Ar) (referred to as RepPLRV, GenBank accession AF220151.1) was inserted into the XhoI restriction site of pBS-LMV- pKYLX vector between the 2X35S and the 2x35S-Trbs. The CPLMV-RepPLRV cassette obtained was released by restriction with the enzymes SpeI and NruI and subcloned into Xbal and HindIII sites of the pZP-Kan binary vector, which carries the nptII gene that allows the selection of plants in media supplemented with kanamycin. The final construct, named pZP-Kan-CPLMV-RepPLRV, was verified by restriction enzyme digestion and was transferred into
Agrobacterium tumefaciens LBA4404 (pAL4404) strain following the protocol of electroporation [
49].
Leaf discs of
Solanum tuberosum cv. Kennebec were co-cultured with the
A. tumefaciens LBA4404 pAL4404 carrying the pZP-Kan-CPLMV-RepPLRV construct, as previously described by Vazquez Rovere et al. [
30]. Transgenic RY plants, as well as 2CA2 line [
30] were maintained in vitro by periodic micropropagation in growing chambers (CMP 3244; Conviron, Winnipeg, MB, Canada) at 18–22 °C, under 8/16 h dark/light cycle. Plants were subsequently transferred to soil, in 8-liter pots, and grown under greenhouse conditions for evaluation of growth parameters: virus testing and/or tuber production. Tubers were harvested and kept in darkness at 4 °C for up to 6 months before sown in field trials or used directly for the different analyses performed in this study.
Genomic DNA from kanamycin-resistant plants was extracted according to Dellaporta et al. [
50]. PCR was performed to confirm the presence of the RepPLRV, using primers 5′RepcATG (ATGGGATTACGGTCTGGAGA) and 3′Rep2 (TCAGTGTTCTTTTGTGGTGGCACTCGGA), and the CPLMV, using CP Up (ACTCTAGAGGATCCAAGCTTTATTTTTACAACAATTACCAACAACAAC) and CP low (TTAGTGCAACCCTCTCACGCCTAAGAGAGTATGCATATTCTGATTTACATC) primers. RNA from leaf tissue was isolated using the Trizol commercial extraction system (Invitrogen, Carlsbad, CA, USA). For cDNA synthesis, 1 μg of RNA was treated with DNase I (Thermo Fisher Scientific, Norristown, PA, USA) and cDNA was synthesized using random primers and SuperScript III reverse transcriptase (Thermo Fisher Scientific) according to the manufacturer’s instructions. cDNAs were amplified by PCR with specific primers: 5′RepcATG and 3′Rep2 for RepPLRV and CP Up and CP low for CPLMV. Amplification of RepPLRV genomic DNA or cDNA was performed under the following conditions: a denaturation step at 95 °C for 1 min, followed by 35 cycles of 1 min at 94 °C, 1 min at 55 °C, and 2 min at 72 °C with a final extension at 72 °C for 10 min. CPLMV from genomic DNA or cDNA was amplified as follows: a denaturation step at 95 °C for 1 min, followed by 35 cycles of 1 min at 94 °C, 1 min at 55 °C, and 1 min at 72 °C with a final extension at 72 °C for 10 min. RNA from the 2CA2 line [
30] was used as a positive control.
Two-week-old in vitro-grown plants were transplanted into 5 L pots with soil and acclimatized for 2–3 weeks. Potato leaf samples were ground in mortars with liquid nitrogen until a fine powder was obtained. Total plant proteins were extracted using buffer 100 mM KCl, 5 mM MgCl
2, 400 mM Sucrose, 100 mM TrisHCl pH 8, 10% glycerol, 10 mM β-Mercaptoethanol, and 2 mM PMSF) [
51], at a ratio of 300 mL per 100 mg of tissue. The mixture was incubated on ice for 10 to 30 min and centrifuged at 4 °C for 20 min at 12,000 rpm. The supernatant was transferred to a clean tube and stored at −80 °C until use. Proteins were separated on 12% SDS-PAGE before blotting on Hybond ECL nitrocellulose membrane (GE Healthcare, Beijing, China). CPLMV protein was detected using an anti-CP rabbit monoclonal primary antibody (Bioreba, Reinach, The Netherlands), followed by an alkaline phosphatase-conjugated anti-rabbit secondary antibody (Merck, Rahway, NJ, USA), and bands were visualized using NBT/BCIP reagents (Promega, Madison, WI, USA).
Two-week-old in vitro-grown plants were transplanted into 5 L pots with soil and acclimatized for 2–3 weeks. Total RNA was extracted from potato leaf tissue as described above. PCR assays for PLRV detection were performed with Platinum Taq DNA Polymerase (Invitrogen) and specific primers: PLpP0up (ATGATTGTATTGACCCAGTC) and PLpP0low (TCATTCTTGTAATTCCTTTTGGAG), which amplify the complete ORF 0 sequence, or PLF (ACDGAYTGYTCYGGTTTYGACTGG) and PLR (TCTGAWARASWCGGCCCGAASGTGA), which amplify the intergenic region of the virus. The reactions were carried out with a denaturation step at 94 ◦C for 4 min, followed by 40 cycles of 1 min at 94 °C, 1 min at 55 °C, and 1 min at 72 °C, with a final extension at 72 °C for 10 min. PCR assays for PVY RNA detection were performed as described above, using the primers Hc-Pro up (GCGGCAGAAACACTCGTCG) and HC-Pro low (CCTGGGCGCTTCGGCCCAAG). In all cases, amplified products were purified using a QIAEX II Gel Extraction Kit (Qiagen, Venlo, The Netherlands), cloned into pGEM®-T Easy Vector (Life Technologies, Carlsbad, CA, USA), and sequencing service was performed at the National Institute of Agricultural Technology, Biotechnology Institute, Genomics Unit.
Two-week-old in vitro-grown plants were transplanted into 5 L pots with soil and acclimatized for 6 weeks. Small RNA libraries were prepared from total RNA using the Qiagen QIAseq miRNA Library Prep Kit and sequenced on an Illumina NovaSeq 6000 (paired-end PE75 × 50) (High-Throughput Genomics Shared Resource at the Huntsman Cancer Institute, University of Utah). Sequencing service was performed at the National Institute of Agricultural Technology, Biotechnology Institute, Genomics Unit. Only Read 1 was used for downstream sRNA analyses. Adapter trimming and quality/length filtering were performed with cutadapt (3′ adapter: AACTGTAGGCACCATCAAT; -q 30 -m 18 -M 26), retaining reads in the 18–26 nt size range. Libraries yielded 51.6–56.1 million raw R1 reads per sample, and 43.8–46.2 million reads per sample after trimming/size selection. Filtered reads were mapped to the RepPLRV (ORF2b; ~1.85 kb) reference (and, when indicated, to the complete PLRV genome, GenBank X74789.1) using ShortStack (Bowtie backend) with zero mismatches (--mismatches 0) and unique placement of multi-mapping reads (--mmap u). BAM files were sorted and indexed with SAMtools, and coverage/positional patterns were visualized with sRNA_Viewer (
https://github.com/MikeAxtell/sRNA_Viewer, accessed on 13 June 2023). NCBI BioSample accessions are: SAMN54431893 (NT), SAMN54431894 (RY21), and SAMN54431895 (RY25).
PVY infection trials were conducted under biosafety greenhouse conditions. Two-week-old in vitro-grown plants were transplanted into 5 L pots with soil and acclimatized for 3 weeks. The N used was variable for non-infected (NI) plants (4 NT and 8 for transgenic lines) and for infected (I) plants (10 NT and 16 for transgenic lines). NT and 2CA2 plants were used as controls.
Plants were mechanically inoculated, scraping the epidermal leaf layer with Carborundum and applying a mixture of field PVY-infected potato foliar extract, collected in Tupungato (2007, 2008, 2016, and 2017). Inocula were confirmed as PVY-positive by ELISA and RT-PCR. Subsequently, leaves were washed with water to remove excess abrasive and inoculum. After a week, inoculation was repeated to ensure PVY infection.
Inoculated and uninoculated (used as healthy controls) plants were maintained under a 16 h day length, and day/night temperatures of 24 ± 2 °C. Symptoms were monitored throughout the experiment, and PVY infection was assessed three weeks post-inoculation using a commercial DAS–ELISA test according to the manufacturer’s instructions (Bioreba). Negative and positive controls of the kit were employed. Assays were conducted three times and analyzed separately. Uninoculated plants were used as healthy controls. Spectrophotometric readings at 405 nm were performed with Multiskan Spectrum equipment (Thermo Fisher Scientific), with air blanking, after different times of substrate reaction, until the highest values were about A405 =1.5–2.0 (between 0.5 and 2 h. of reaction). Twice the mean of the absorbance values of the healthy control was chosen to consider positive for PVY infection.
Candidate resistant transgenic plants were subjected to field trials to analyze agronomic performance and genetic stability of resistance to PLRV and PVY. For each field trial, prior to sowing, the soil was cleared, and the furrows were prepared. Virus-free tubers were stored at low temperature for at least 60 days after harvest. A complete randomized block design with three replicates was used to evaluate the transgenic lines and NT controls. Tubers were planted in rows 4 m long, spaced every 2 m, at a depth of 2 or 3 cm below the soil surface. A total of 24 m
2 was planted for each of the transgenic lines or with non-transgenic (NT cv. Kennebec or Spunta) tubers. Average fresh tuber weight obtained (in grams (g)) calculated from the mean value (total tuber weight divided by total number of plants/tubers) of each block. The plots were fenced to avoid vandalism and to prevent access by large animals. Comparative field trials to evaluate the agronomical performance of RY lines were carried out during the growing seasons of 2005–2006 and 2015–2016 at Malargüe, Mendoza Province, which is a virus-free potato seed production region of Argentina. Three additional consecutive planting campaigns were carried out in a field in Buenos Aires Province, Argentina, between 2022 and 2024. Viral resistance evaluations under natural field exposure were performed in Tupungato, Mendoza Province (Argentina), which is a potato production region in which PVY and PLRV infection rates are normally high. These trials were carried out during two consecutive growing seasons (2015/2016 and 2016/2017). Regarding the PLRV strains circulating at the endemic site during that period, the detected isolate corresponded to the Argentinian strain of PLRV (PLRV-Ar; GenBank accession number KY856831). Furthermore, the PVY strain present in the Mendoza experimental field coincided with the one that had been previously identified by Barrios Barón as a recombinant NTN type isolate (recombinant PVYNTN) [
34]. For all trials, the number of plants grown in the field was recorded for each replicate block. Both trials were harvested manually in the autumn, collecting tubers from individual plants separately to avoid mixing. Tubers harvested from each replicate block were bulked by line, then counted and weighed. Tubers were stored at 4 °C until their evaluation. Viral diagnosis was performed by ELISA tests by the Potato Seed Analysis Laboratory of INTA Balcarce. Harvested tubers were sprout-tested. For this test individual buds were excised from tubers and planted in a greenhouse. Emerged young plants were assessed for virus infection by recording symptoms and by ELISA at 2–4 weeks after emergence. In selected cases, results were validated using RT-PCR. Agronomic performance of transgenic lines was compared to that of NT Kennebec and Spunta controls. Biological containment of field trials, assay isolation, and disposal of transgenic materials were performed as established by the guidelines of the National Commission on Agrobiotechnology (CONABIA, Argentina, S01:0053198/2005; S01:045507/07; S05:0058167/2014; Expte:2020-72180378).
Two-way ANOVA was used for ELISA test statistical analysis using Graphpad Prism 8 software (USA). Statistical significance was set at a value of
p < 0.05. The agronomic performance was analyzed using the nonparametric Kruskal–Wallis test implemented in InfoStat (
http://www.infostat.com.ar, accessed on 19 November 2025). Statistical significance was set at a value of
p < 0.05. Fisher’s exact test was used for comparing each line against NT in the viral resistance evaluation, where (*) denotes
p < 0.05.