Assessing the Potential of Multispectral UAV-Derived Vegetation Indices for Estimating Water Use of Taro (Colocasia esculenta) Under Different Weed Management Practices
Abstract
1. Introduction
2. Results
2.1. Identifying the Optimal VI-Based ETa Models Based on Statistical Metrics
2.2. The Validation of VI-Based Empirical Models with Eddy Covariance Data
2.3. Adopting the Optimal Model to Observe the Water Use of Taro Under Different Management Practices
2.4. Assessing the Cost and Benefit of Adopting These Weed Management Practices
3. Discussion
3.1. UAV Potential in Smallholder Farms
3.2. Evaluation of VI-Based ETa Models
3.3. Contribution of Findings in Understanding Taro
4. Materials and Methods
4.1. Study Site Description
4.2. Field Design
4.2.1. Site A (Commercial Farm)
4.2.2. Site B (Fountainhill Estate)
4.2.3. Site C (Swayimane)
4.3. Data Acquisition
4.3.1. In Situ ETa Data Acquisition and Preprocessing
- Data Filtering: Only the 30 min data recorded between 07:00 and 17:00 SAST were stored for ETa estimation because it represented a period when evapotranspiration normally occurs. Low turbulence normally occurs at night.
- An internet modem was installed on the eddy covariance flux tower to ensure that regular updates were uploaded to an online server. This allowed the early detection of malfunctioning sensors or low battery voltage, which significantly minimized data loss (less than 7%). If the Kc value could not be obtained using residual ETa (indirect method), the average Kc value from the growth phases estimates would be obtained.
- Negative λET values were omitted, since they indicated potential malfunction of sensors that are often caused by interference, exposure to condensation or power shortage. These values were interpolated by calculating the product of daily ETo and the average monthly Kc value.
- Data had to be excluded when Rn was negative or G was greater Rn. In such instances, a correction factor for G had to be applied.
- The energy balance closure was determined in both sites (A and B). The method that was adopted was a ratio between (H + λET) and (Rn–G). A value closer to 1 indicates near-perfect energy balance closure [62]. The two sites had an energy balance closure above 75%.
4.3.2. Remotely Sensed Data Acquisition and Preprocessing
4.4. Methodology for Generating VI-Based ETa Empirical Model
4.5. Assessing the Performance of the VI-Based ET Empirical Model Estimates
4.6. Assessing the Cost and Benefit of Implementing Different Weed Management Practices
5. Conclusions
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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| Site | Statistic | ETa-NDVI | ETa-NDVI Scaled | ETa-NDVI (Kc) | ETa-EVI2 | ETa-EVI2 Scaled | ETa-EVI2 (Kc) | ETa-MEVI2 |
|---|---|---|---|---|---|---|---|---|
| Site A | R2 | 0.83 | 0.83 | 0.84 | 0.83 | 0.83 | 0.86 | 0.87 |
| MAE | 0.38 | 0.47 | 1.49 | 1.03 | 0.70 | 0.56 | 0.63 | |
| RMSE | 0.44 | 0.56 | 1.66 | 1.14 | 0.78 | 0.60 | 0.68 | |
| Score | 0.800 | 0.728 | 0.050 | 0.336 | 0.573 | 0.833 | 0.831 | |
| Rank | 3 | 4 | 7 | 6 | 5 | 1 | 2 | |
| Site B | R2 | 0.49 | 0.49 | 0.49 | 0.49 | 0.51 | 0.57 | 0.57 |
| MAE | 0.58 | 1.20 | 0.79 | 0.66 | 0.59 | 0.76 | 0.58 | |
| RMSE | 0.76 | 1.36 | 0.95 | 0.83 | 0.79 | 0.95 | 0.80 | |
| Score | 0.800 | 0.000 | 0.538 | 0.702 | 0.824 | 0.757 | 0.973 | |
| Rank | 3 | 7 | 6 | 5 | 2 | 4 | 1 |
| Model | S1 | S2 | S3 | Full Season | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| % Within ±20% | Cum. Bias (%) | ETa (mm) | ETo (mm) | % Within ±20% | Cum. Bias (%) | ETa (mm) | ETo (mm) | % Within ±20% | Cum. Bias (%) | ETa (mm) | ETo (mm) | % Within ±20% | Cum. Bias (%) | ETa (mm) | |
| ETa-EC direct (measured) | - | - | 101.3 | 134.5 | - | - | 127.8 | 167.2 | - | - | 107.0 | 162.5 | - | - | 336.2 |
| ETa-NDVI | 38.7 | −30.5 | 70.5 | 134.5 | 33.3 | −24.8 | 96.2 | 167.2 | 47.8 | −12.8 | 93.3 | 162.5 | 40.3 | −22.7 | 259.9 |
| ETa-NDVI scaled | 67.7 | −16.6 | 84.6 | 134.5 | 78.6 | −9.8 | 115.4 | 167.2 | 60.9 | +4.7 | 112.0 | 162.5 | 68.9 | −7.2 | 311.9 |
| ETa-NDVI (Kc) | 19.4 | +13.5 | 115.0 | 134.5 | 40.5 | +20.2 | 153.6 | 167.2 | 28.3 | +39.4 | 149.2 | 162.5 | 30.3 | +24.3 | 417.8 |
| ETa-EVI2 | 0.0 | −58.2 | 42.4 | 134.5 | 0.0 | −46.7 | 68.1 | 167.2 | 37.0 | −31.4 | 73.4 | 162.5 | 14.3 | −45.3 | 183.8 |
| ETa-EVI2 scaled | 0.0 | −49.8 | 50.8 | 134.5 | 0.0 | −36.1 | 81.7 | 167.2 | 47.8 | −17.7 | 88.0 | 162.5 | 18.5 | −34.4 | 220.6 |
| ETa-EVI2(Kc) | 67.7 | −21.2 | 79.9 | 134.5 | 81.0 | −7.3 | 118.6 | 167.2 | 47.8 | +16.1 | 124.2 | 162.5 | 64.7 | −4.0 | 322.6 |
| ETa-MEVI2 | 67.7 | −20.5 | 80.6 | 134.5 | 88.1 | −3.4 | 123.5 | 167.2 | 41.3 | +20.6 | 129.1 | 162.5 | 64.7 | −0.9 | 333.1 |
| Model | Phase II | Phase III | Full Season | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| % within ±20% | Cum. Bias (%) | ETa (mm) | ETo (mm) | % within ±20% | Cum. Bias (%) | ETa (mm) | ETo (mm) | % within ±20% | Cum. Bias (%) | ETa (mm) | |
| ETa-EC direct (measured) | - | - | 151.2 | 347.1 | - | - | 17.5 | 59.8 | - | - | 168.8 |
| ETa-NDVI | 50.4 | +14.9 | 173.7 | 347.1 | 16.0 | −10.7 | 15.7 | 59.8 | 44.4 | +12.2 | 189.4 |
| ETa-NDVI scaled | 14.3 | +37.8 | 208.5 | 347.1 | 28.0 | +7.1 | 18.8 | 59.8 | 16.7 | +34.7 | 227.3 |
| ETa-NDVI (Kc) | 5.0 | +89.5 | 286.6 | 347.1 | 16.0 | +79.8 | 31.5 | 59.8 | 6.9 | +88.5 | 318.1 |
| ETa-EVI2 | 7.6 | −23.7 | 115.4 | 347.1 | 8.0 | −49.8 | 8.8 | 59. | 7.6 | −26.4 | 124.2 |
| ETa-EVI2 scaled | 22.7 | −9.5 | 136.9 | 347.1 | 8.0 | −40.7 | 10.4 | 59.8 | 20.1 | −12.7 | 147.3 |
| ETa-EVI2 (Kc) | 12.6 | +41.3 | 213.7 | 347.1 | 48.0 | +31.0 | 23.0 | 59.8 | 18.8 | +40.2 | 236.6 |
| ETa-MEVI2 | 16.8 | +13.8 | 172.1 | 347.1 | 28.0 | −14.4 | 15.0 | 59.8 | 18.8 | +10.9 | 187.1 |
| ROI | Growth Phase | DAP Range | Kc | MEVI2 | NDVI | NDVI (Scaled) | EVI2 (Kc) | EVI2 (Scaled) |
|---|---|---|---|---|---|---|---|---|
| Site A | S1 | 42–72 | 0.75 | 0.60 | - | 0.63 | 0.59 | - |
| S2 | 73–114 | 0.76 | 0.74 | - | 0.69 | 0.71 | - | |
| S3 | 115–160 | 0.66 | 0.79 | - | 0.69 | 0.76 | - | |
| Site B | Phase II | 78–196 | 0.44 | 0.50 | 0.50 | - | - | 0.39 |
| Phase III | 197–221 | 0.29 | 0.25 | 0.26 | - | - | 0.17 |
| ETa-MEVI2 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Image | Day of Year | DAP | ETo (mm) | UNWEEDED | WEEDED | INTERMEDIATE | |||
| MEVI2 | ETa (mm) | MEVI2 | ETa (mm) | MEVI2 | ETa (mm) | ||||
| a | 22 November 2023 | 62 | 6.90 | 0.67 | 4.65 | 0.12 | 0.80 | 0.12 | 0.79 |
| b | 8 December 2023 | 78 | 6.98 | 0.98 | 6.87 | 0.37 | 2.61 | 0.33 | 2.31 |
| c | 19 December 2023 | 89 | 1.59 | 1.03 | 1.64 | 0.58 | 0.93 | 0.49 | 0.78 |
| d | 10 January 2024 | 111 | 3.74 | 0.55 | 2.05 | 0.28 | 1.04 | 0.28 | 1.04 |
| e | 25 January 2024 | 126 | 2.08 | 1.01 | 2.10 | 0.75 | 1.55 | 0.87 | 1.81 |
| f | 6 February 2024 | 138 | 6.57 | 0.92 | 6.07 | 0.81 | 5.36 | 0.94 | 6.18 |
| g | 21 February 2024 | 153 | 5.63 | 0.92 | 5.18 | 0.62 | 3.50 | 1.01 | 5.68 |
| h | 15 March 2024 | 175 | 5.50 | 0.77 | 4.23 | 0.42 | 2.32 | 0.96 | 5.26 |
| i | 26 March 2024 | 186 | 5.44 | 1.01 | 5.51 | 0.67 | 3.65 | 0.34 | 1.83 |
| Model | Growth Phase | DAP Range | Unweeded (mm) | Weeded (mm) | Intermediate (mm) |
|---|---|---|---|---|---|
| ETa-MEVI2 | Phase I | 50–59 | 27.49 | 4.70 | 4.69 |
| Phase II | 60–179 | 382.26 | 221.06 | 289.81 | |
| Phase III | 180–191 | 29.91 | 16.40 | 37.24 |
| Kc proxy | Growth Phase | DAP Range | ETo (mm) | Unweeded Field | Weeded Field | Intermediate |
|---|---|---|---|---|---|---|
| MEVI2 | Phase I | 50–59 | 40.79 | 0.67 | 0.12 | 0.12 |
| Phase II | 60–179 | 440.62 | 0.87 | 0.51 | 0.66 | |
| Phase III | 180–191 | 38.91 | 0.77 | 0.42 | 0.96 |
| Weed Management Practice | Input | Cost (ZAR) | Cost (USD) |
|---|---|---|---|
| Unweeded | Cultivator | R 300 | $16.67 |
| no extra input | R 0 | $0 | |
| Total | R 300 | $16.67 | |
| Weeded | Cultivator | R 300 | $16.67 |
| weeding (9 times) | R 5400 | $300 | |
| Total | R 5700 | $316.67 | |
| Intermediate | Cultivator | R 300 | $16.67 |
| Herbicide and application (R1782 + R 300) | R 2082 | $115.67 | |
| Cattle cultivation | R 480 | $26.67 | |
| Manual labor | R 600 | $33.33 | |
| Total | R 3462 | $192.33 |
| Management Practice | Sample 1 (g) | Sample 2 (g) | Sample 3 (g) | Sample 4 (g) | Sample 5 (g) | Mean ± SD (g) |
|---|---|---|---|---|---|---|
| Unweeded | 143.7 | 168.4 | 151.6 | 174.3 | 143.0 | 156.2 ± 14.4 |
| Weeded | 982.4 | 1054.7 | 1011.3 | 1038.6 | 1001.0 | 1017.6 ± 29.0 |
| Intermediate | 756.6 | 821.3 | 783.7 | 806.4 | 780.0 | 789.6 ± 25.0 |
| Management Practice | Corm Mass Per Plant (g) | Number of Plants in a Field | Mass of Corms Per Field (kg) | Revenue Per Field | Management Expenses | Net Profit (ZAR) | Net Profit (USD) | WUE (kg/mm) |
|---|---|---|---|---|---|---|---|---|
| Unweeded | 156.2 | 3332 | 520.46 | R 3383 | R 300 | R 3083 | $171 | 1.16 |
| Weeded | 1017.6 | 3332 | 3390.64 | R 22039 | R 5700 | R 16339 | $908 | 14.00 |
| Intermediate | 789.6 | 3332 | 2630.95 | R 17101 | R 3462 | R 13639 | $758 | 7.93 |
| ROI | Measurement Period (Days) | TMAX Avg (°C) | TMIN Avg (°C) | Rainfall (mm) | RH Avg (%) |
|---|---|---|---|---|---|
| Site A | 120 | 25.55 | 15.86 | 294.60 | 73.68 |
| Site B | 101 | 26.57 | 16.31 | 292.60 | 67.41 |
| Site C | 131 | 24.93 | 16.60 | 250.50 | 82.35 |
| Growth Phase | Development | Duration (Weeks After Planting) |
|---|---|---|
| S0 | Germination and emergence | 1–4 weeks |
| S1 | Vegetative stage | 5–9 weeks |
| S2 | Full canopy flowering/bud formation, peak water demand | 10–14weeks |
| S3 | Flower maturation, leaf senescence | 15–20 weeks |
| Growth Phase | Development Stage | Months After Planting |
|---|---|---|
| Phase I (crop establishment) | Recovered plant after sowing | 1–2 months |
| Phase II (grand growth) | Maximum rooting depth, and canopy cover | 4- 5 months |
| Phase III (Maturation) | Leaf senescence, yield formation | 6–8 months |
| Instruments | Measurement | Manufacturer |
|---|---|---|
| EC150 CO2/H2O Open-Path Gas Analyser | CO2/H2O flux | Campbell Scientific, Logan, UT, USA |
| TE525 mm Tipping Bucket Rain Gauge | Rainfall | Texas Instruments, Dallas, TX, USA |
| HC2S3 Temperature and Relative Humidity Probe | Temperature; relative humidity | Campbell Scientific, Logan, UT, USA |
| HFP01 Soil Heat Flux Plate | Ground heat flux | Huxaflux, Delft, The Netherlands |
| CSAT3A Three-Dimensional Sonic Anemometer | CO2/H2O flux | Campbell Scientific, Logan, UT, USA |
| CNR4 Net Radiometer | Net solar radiation | Kipp and Zonen, Delft, The Netherlands |
| FW1 Type E fine wire thermocouples | Air temperature | Campbell Scientific, Logan, UT, USA |
| TCAV Type E thermocouples | Average soil temperature | Campbell Scientific, Logan, UT, USA |
| CS616 Water Content Reflectometers | Volumetric soil water content | Campbell Scientific, Logan, UT, USA |
| Sensor | Band | Central Wavelength (nm) | GSD (m.pixel−1) |
|---|---|---|---|
| Mica Sense Altum Sensor | B1—Blue | 475 | 0.07 |
| B2—Green | 560 | 0.07 | |
| B3—Red | 668 | 0.07 | |
| B4—Red-edge | 717 | 0.07 | |
| B5—Near-infrared (NIR) | 842 | 0.07 | |
| B6—Thermal infrared | 8000–14,000 | 1.09 | |
| Mavic 3 multispectral | B2—Green | 560 | 0.007 |
| B3—Red | 650 | 0.007 | |
| B4—Red-edge | 730 | 0.007 | |
| B5—Near-infrared (NIR) | 860 | 0.007 |
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© 2026 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license.
Share and Cite
Muchaonyerwa, K.; Mahomed, M.; Gokool, S.; Clulow, A.; Denton, G.; Reddy, K.; Kunz, R. Assessing the Potential of Multispectral UAV-Derived Vegetation Indices for Estimating Water Use of Taro (Colocasia esculenta) Under Different Weed Management Practices. Plants 2026, 15, 2857. https://doi.org/10.3390/plants15182857
Muchaonyerwa K, Mahomed M, Gokool S, Clulow A, Denton G, Reddy K, Kunz R. Assessing the Potential of Multispectral UAV-Derived Vegetation Indices for Estimating Water Use of Taro (Colocasia esculenta) Under Different Weed Management Practices. Plants. 2026; 15(18):2857. https://doi.org/10.3390/plants15182857
Chicago/Turabian StyleMuchaonyerwa, Knowledge, Maqsooda Mahomed, Shaeden Gokool, Alistair Clulow, Gary Denton, Kyle Reddy, and Richard Kunz. 2026. "Assessing the Potential of Multispectral UAV-Derived Vegetation Indices for Estimating Water Use of Taro (Colocasia esculenta) Under Different Weed Management Practices" Plants 15, no. 18: 2857. https://doi.org/10.3390/plants15182857
APA StyleMuchaonyerwa, K., Mahomed, M., Gokool, S., Clulow, A., Denton, G., Reddy, K., & Kunz, R. (2026). Assessing the Potential of Multispectral UAV-Derived Vegetation Indices for Estimating Water Use of Taro (Colocasia esculenta) Under Different Weed Management Practices. Plants, 15(18), 2857. https://doi.org/10.3390/plants15182857

