ZmPRN1 Negatively Regulates Salt Stress Tolerance by Modulating ROS Homeostasis in Maize (Zea mays L.)
Abstract
1. Introduction
2. Results
2.1. Expression Patterns and Subcellular Localization of ZmPRN1
2.2. Loss-of-Function of ZmPRN1 Enhanced Plants’ Tolerance to Salt Stress
2.3. ZmPRN1 Regulates Reactive Oxygen Species Homeostasis Under Salt Stress
2.4. Screening and Validation of ZmPRN1-Interacting Proteins
3. Discussion
4. Materials and Methods
4.1. Plant Materials and Growth Conditions
4.2. Salt Treatment
4.3. H2O2 Treatment
4.4. Quantitative Real-Time PCR (RT-qPCR) Analysis
4.5. Histochemical Staining of O2•− and H2O2
4.6. RNA-Seq
4.7. Subcellular Localization
4.8. Analysis of Chlorophyll Content
4.9. SPAD Value Measurement
4.10. Yeast Two-Hybrid Library Screening
4.11. Yeast Two-Hybrid (Y2H) Assay
4.12. Split-Luciferase Complementation Assay
4.13. Statistical Analysis
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
- Yang, Z.; Cao, Y.; Shi, Y.; Qin, F.; Jiang, C.; Yang, S. Genetic and molecular exploration of maize environmental stress resilience: Toward sustainable agriculture. Mol. Plant 2023, 16, 1496–1517. [Google Scholar] [CrossRef]
- Schnable, J.C. Genome evolution in maize: From genomes back to genes. Annu. Rev. Plant Biol. 2015, 66, 329–343. [Google Scholar] [CrossRef]
- Munns, R. Genes and salt tolerance: Bringing them together. New Phytol. 2005, 167, 645–663. [Google Scholar] [CrossRef]
- Munns, R.; Gilliham, M. Salinity tolerance of crops—What is the cost? New Phytol. 2015, 208, 668–673. [Google Scholar] [CrossRef] [PubMed]
- Zhu, J.K. Abiotic stress signaling and responses in plants. Cell 2016, 167, 313–324. [Google Scholar] [CrossRef] [PubMed]
- Egamberdieva, D.; Wirth, S.; Bellingrath-Kimura, S.D.; Mishra, J.; Arora, N.K. Salt-tolerant plant growth promoting rhizobacteria for enhancing crop productivity of saline soils. Front. Microbiol. 2019, 10, 2791. [Google Scholar] [CrossRef] [PubMed]
- Yang, Y.; Guo, Y. Elucidating the molecular mechanisms mediating plant salt-stress responses. New Phytol. 2018, 217, 523–539. [Google Scholar] [CrossRef]
- Yang, Y.; Guo, Y. Unraveling salt stress signaling in plants. J. Integr. Plant Biol. 2018, 60, 796–804. [Google Scholar] [CrossRef]
- van Zelm, E.; Zhang, Y.; Testerink, C. Salt tolerance mechanisms of plants. Annu. Rev. Plant Biol. 2020, 71, 403–433. [Google Scholar] [CrossRef]
- Munns, R.; Tester, M. Mechanisms of salinity tolerance. Annu. Rev. Plant Biol. 2008, 59, 651–681. [Google Scholar] [CrossRef]
- Ismail, A.M.; Horie, T. Genomics, physiology, and molecular breeding approaches for improving salt tolerance. Annu. Rev. Plant Biol. 2017, 68, 405–434. [Google Scholar] [CrossRef] [PubMed]
- Farooq, M.; Hussain, M.; Wakeel, A.; Siddique, K.H.M. Salt stress in maize: Effects, resistance mechanisms, and management. A review. Agron. Sustain. Dev. 2015, 35, 461–481. [Google Scholar] [CrossRef]
- He, X.; Zhu, J.; Gong, X.; Zhang, D.; Li, Y.; Zhang, X.; Zhao, X.; Zhou, C. Advances in deciphering the mechanisms of salt tolerance in maize. Plant Signal. Behav. 2025, 20, 2479513. [Google Scholar] [CrossRef]
- Munns, R.; Passioura, J.B.; Colmer, T.D.; Byrt, C.S. Osmotic adjustment and energy limitations to plant growth in saline soil. New Phytol. 2020, 225, 1091–1096. [Google Scholar] [CrossRef] [PubMed]
- Liang, X.; Li, J.; Yang, Y.; Jiang, C.; Guo, Y. Designing salt stress-resilient crops: Current progress and future challenges. J. Integr. Plant Biol. 2024, 66, 303–329. [Google Scholar] [CrossRef] [PubMed]
- Jiang, Z.; Zhou, X.; Tao, M.; Yuan, F.; Liu, L.; Wu, F.; Wu, X.; Xiang, Y.; Niu, Y.; Liu, F.; et al. Plant cell-surface GIPC sphingolipids sense salt to trigger Ca2+ influx. Nature 2019, 572, 341–346. [Google Scholar] [CrossRef]
- Gong, Z.; Xiong, L.; Shi, H.; Yang, S.; Herrera-Estrella, L.R.; Xu, G.; Chao, D.-Y.; Li, J.; Wang, P.-Y.; Qin, F.; et al. Plant abiotic stress response and nutrient use efficiency. Sci. China Life Sci. 2020, 63, 635–674. [Google Scholar] [CrossRef]
- Qu, Y.; Zhang, J.; Zhang, Y.; Xie, Y.; Cao, X.; Li, J.; Yin, Z.; Luo, J.; Long, Y.; Zaidi, P.H.; et al. Molecular mechanisms and genic resources responsive to salinity stress and their applications in maize and other crop breeding. Sci. Bull. 2026, 71, 2094–2114. [Google Scholar] [CrossRef]
- Demidchik, V.; Cuin, T.A.; Svistunenko, D.; Smith, S.J.; Miller, A.J.; Shabala, S.; Sokolik, A.; Yurin, V. Arabidopsis root K+-efflux conductance activated by hydroxyl radicals: Single-channel properties, genetic basis and involvement in stress-induced cell death. J. Cell Sci. 2010, 123, 1468–1479. [Google Scholar] [CrossRef]
- Zhang, M.; Smith, J.A.C.; Harberd, N.P.; Jiang, C. The regulatory roles of ethylene and reactive oxygen species (ROS) in plant salt stress responses. Plant Mol. Biol. 2016, 91, 651–659. [Google Scholar] [CrossRef]
- Mignolet-Spruyt, L.; Xu, E.; Idanheimo, N.; Hoeberichts, F.A.; Muhlenbock, P.; Brosche, M.; Van Breusegem, F.; Kangasjarvi, J. Spreading the news: Subcellular and organellar reactive oxygen species production and signalling. J. Exp. Bot. 2016, 67, 3831–3844. [Google Scholar] [CrossRef]
- Wrzaczek, M.; Brosche, M.; Kangasjarvi, J. ROS signaling loops—Production, perception, regulation. Curr. Opin. Plant Biol. 2013, 16, 575–582. [Google Scholar] [CrossRef]
- Choudhury, F.K.; Rivero, R.M.; Blumwald, E.; Mittler, R. Reactive oxygen species, abiotic stress and stress combination. Plant J. 2017, 90, 856–867. [Google Scholar] [CrossRef] [PubMed]
- Mittler, R. ROS are good. Trends Plant Sci. 2017, 22, 11–19. [Google Scholar] [CrossRef]
- Mittler, R.; Vanderauwera, S.; Gollery, M.; Van Breusegem, F. Reactive oxygen gene network of plants. Trends Plant Sci. 2004, 9, 490–498. [Google Scholar] [CrossRef] [PubMed]
- Gill, S.S.; Tuteja, N. Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants. Plant Physiol. Biochem. 2010, 48, 909–930. [Google Scholar] [CrossRef]
- Das, K.; Roychoudhury, A. Reactive oxygen species (ROS) and response of antioxidants as ROS-scavengers during environmental stress in plants. Front. Environ. Sci. 2014, 2, 53. [Google Scholar] [CrossRef]
- Xing, L.; Zhu, M.; Luan, M.; Zhang, M.; Jin, L.; Liu, Y.; Zou, J.; Wang, L.; Xu, M. miR169q and NUCLEAR FACTOR YA8 enhance salt tolerance by activating PEROXIDASE1 expression in response to ROS. Plant Physiol. 2022, 188, 608–623. [Google Scholar] [CrossRef]
- Qin, R.; Hu, Y.; Chen, H.; Du, Q.; Yang, J.; Li, W.X. MicroRNA408 negatively regulates salt tolerance by affecting secondary cell wall development in maize. Plant Physiol. 2023, 192, 1569–1583. [Google Scholar] [CrossRef]
- Li, A.; Yang, Y.; Guo, Y.; Li, Q.; Zhou, A.; Wang, J.; Lu, R.; Shelden, M.C.; Wu, C.; Wu, J. ZmASR6 positively regulates salt stress tolerance in maize. New Crops 2025, 2, 100067. [Google Scholar] [CrossRef]
- Deng, P.; Cao, C.; Shi, X.; Jiang, Q.; Ge, J.; Shen, L.; Guo, C.; Jiang, L.; Jing, W.; Zhang, W. OsCYBDOMG1, a cytochrome b561 domain-containing protein, regulates salt tolerance and grain yield in rice. Theor. Appl. Genet. 2023, 136, 76. [Google Scholar] [CrossRef]
- Zhou, Y.B.; Liu, C.; Tang, D.Y.; Yan, L.; Wang, D.; Yang, Y.Z.; Gui, J.S.; Zhao, X.Y.; Li, L.G.; Tang, X.D.; et al. The receptor-like cytoplasmic kinase STRK1 phosphorylates and activates CatC, thereby regulating H2O2 homeostasis and improving salt tolerance in rice. Plant Cell 2018, 30, 1100–1118. [Google Scholar] [CrossRef]
- Bian, X.H.; Li, W.; Niu, C.F.; Wei, W.; Hu, Y.; Han, J.Q.; Lu, X.; Tao, J.J.; Jin, M.; Qin, H.; et al. A class B heat shock factor selected for during soybean domestication contributes to salt tolerance by promoting flavonoid biosynthesis. New Phytol. 2020, 225, 268–283. [Google Scholar] [CrossRef]
- Xiao, T.; Zhang, S.; Gu, Y.; Hu, H.; Sun, L.; Lu, C.; Warburton, M.L.; Li, H.; Zhu, J. Systematic analysis of the F3H family in maize reveals a role for ZmF3H6 in salt stress tolerance. New Crops 2026, 3, 100082. [Google Scholar] [CrossRef]
- Wang, C.; Wei, X.; Wang, Y.; Wu, C.; Jiao, P.; Jiang, Z.; Liu, S.; Ma, Y.; Guan, S.J.P.B.J. Metabolomics and transcriptomic analysis revealed the response mechanism of maize to saline-alkali stress. Plant Biotechnol. J. 2025, 23, 5397–5416. [Google Scholar] [CrossRef]
- Zhang, H.; Yu, F.; Xie, P.; Sun, S.; Qiao, X.; Tang, S.; Chen, C.; Yang, S.; Mei, C.; Yang, D.; et al. A Ggamma protein regulates alkaline sensitivity in crops. Science 2023, 379, eade8416. [Google Scholar] [CrossRef] [PubMed]
- Dunwell, J.M.; Culham, A.; Carter, C.E.; Sosa-Aguirre, C.R.; Goodenough, P.W. Evolution of functional diversity in the cupin superfamily. Trends Biochem. Sci. 2001, 26, 740–746. [Google Scholar] [CrossRef]
- Guo, B.; Zhang, Y.; Hicks, G.; Huang, X.; Li, R.; Roy, N.; Jia, Z. Structure-dependent modulation of substrate binding and biodegradation activity of pirin proteins toward plant flavonols. ACS Chem. Biol. 2019, 14, 2629–2640. [Google Scholar] [CrossRef]
- Orzaez, D.; de Jong, A.J.; Woltering, E.J. A tomato homologue of the human protein PIRIN is induced during programmed cell death. Plant Mol. Biol. 2001, 46, 459–468. [Google Scholar] [CrossRef]
- Lapik, Y.R.; Kaufman, L.S. The Arabidopsis cupin domain protein AtPirin1 interacts with the G protein alpha-subunit GPA1 and regulates seed germination and early seedling development. Plant Cell 2003, 15, 1578–1590. [Google Scholar] [CrossRef] [PubMed]
- Orozco-Nunnelly, D.A.; Muhammad, D.; Mezzich, R.; Lee, B.S.; Jayathilaka, L.; Kaufman, L.S.; Warpeha, K.M. Pirin1 (PRN1) is a multifunctional protein that regulates quercetin, and impacts specific light and UV responses in the seed-to-seedling transition of Arabidopsis thaliana. PLoS ONE 2014, 9, e93371. [Google Scholar] [CrossRef]
- Zhang, B.; Sztojka, B.; Escamez, S.; Vanholme, R.; Hedenström, M.; Wang, Y.; Turumtay, H.; Gorzsás, A.; Boerjan, W.; Tuominen, H. PIRIN2 suppresses S-type lignin accumulation in a noncell-autonomous manner in Arabidopsis xylem elements. New Phytol. 2020, 225, 1923–1935. [Google Scholar] [CrossRef]
- Zhang, B.; Tremousaygue, D.; Denancé, N.; van Esse, H.P.; Hörger, A.C.; Dabos, P.; Goffner, D.; Thomma, B.P.; van der Hoorn, R.A.; Tuominen, H. PIRIN2 stabilizes cysteine protease XCP2 and increases susceptibility to the vascular pathogen ralstonia solanacearum in Arabidopsis. Plant J. 2014, 79, 1009–1019. [Google Scholar] [CrossRef]
- Brunetti, S.C.; Arseneault, M.K.M.; Gulick, P.J. Characterization and expression of the Pirin gene family in Triticum aestivum. Genome 2022, 65, 349–362. [Google Scholar] [CrossRef] [PubMed]
- McCarty, D.R.; Koch, K.E. Functional genomic analysis of transposon insertion mutant maize plants from the uniformMu national public resource. Cold Spring Harb. Protoc. 2025. online ahead of print. [Google Scholar] [CrossRef]
- Yamori, W.; Makino, A.; Shikanai, T. A physiological role of cyclic electron transport around photosystem I in sustaining photosynthesis under fluctuating light in rice. Sci. Rep. 2016, 6, 20147. [Google Scholar] [CrossRef]
- Yamori, W.; Shikanai, T. Physiological functions of cyclic electron transport around photosystem I in sustaining photosynthesis and plant growth. Annu Rev. Plant Biol. 2016, 67, 81–106. [Google Scholar] [CrossRef]
- Shikanai, T. Chloroplast NDH: A different enzyme with a structure similar to that of respiratory NADH dehydrogenase. Biochim. Biophys. Acta (BBA) Bioenerg. 2016, 1857, 1015–1022. [Google Scholar] [CrossRef]
- Su, X.; Cao, D.; Pan, X.; Shi, L.; Liu, Z.; Dall’Osto, L.; Bassi, R.; Zhang, X.; Li, M. Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana. Mol. Plant 2022, 15, 454–467. [Google Scholar] [CrossRef] [PubMed]
- Joliot, P.; Johnson, G.N. Regulation of cyclic and linear electron flow in higher plants. Proc. Natl. Acad. Sci. USA 2011, 108, 13317–13322. [Google Scholar] [CrossRef]
- Han, G.; Qiao, Z.; Li, Y.; Yang, Z.; Wang, C.; Zhang, Y.; Liu, L.; Wang, B. RING zinc finger proteins in plant abiotic stress tolerance. Front. Plant Sci. 2022, 13, 877011. [Google Scholar] [CrossRef] [PubMed]
- Sun, J.; Sun, Y.; Ahmed, R.I.; Ren, A.; Xie, A.M. Research progress on plant RING-finger proteins. Genes 2019, 10, 973. [Google Scholar] [CrossRef]
- Liu, Z.; Qiu, J.; Shen, Z.; Wang, C.; Jiang, N.; Shi, H.; Kou, Y. The E3 ubiquitin ligase OsRGLG5 targeted by the Magnaporthe oryzae effector AvrPi9 confers basal resistance against rice blast. Plant Commun. 2023, 4, 100626. [Google Scholar] [CrossRef]
- Liu, D.; Zhang, X.; Li, Q.; Xiao, Y.; Zhang, G.; Yin, W.; Niu, M.; Meng, W.; Dong, N.; Liu, J.; et al. The U-box ubiquitin ligase TUD1 promotes brassinosteroid-induced GSK2 degradation in rice. Plant Commun. 2025, 6, 101255. [Google Scholar] [CrossRef] [PubMed]
- McClellan, A.J.; Laugesen, S.H.; Ellgaard, L. Cellular functions and molecular mechanisms of non-lysine ubiquitination. Open Biol. 2019, 9, 190147. [Google Scholar] [CrossRef]
- Wang, K.; Li, S.; Chen, L.; Tian, H.; Chen, C.; Fu, Y.; Du, H.; Hu, Z.; Li, R.; Du, Y.; et al. E3 ubiquitin ligase OsPIE3 destabilises the B-lectin receptor-like kinase PID2 to control blast disease resistance in rice. New Phytol. 2023, 237, 1826–1842. [Google Scholar] [CrossRef] [PubMed]
- Vain, T.; Raggi, S.; Ferro, N.; Barange, D.K.; Kieffer, M.; Ma, Q.; Doyle, S.M.; Thelander, M.; Parizkova, B.; Novak, O.; et al. Selective auxin agonists induce specific AUX/IAA protein degradation to modulate plant development. Proc. Natl. Acad. Sci. USA 2019, 116, 6463–6472. [Google Scholar] [CrossRef]
- Ori, N. Dissecting the biological functions of ARF and Aux/IAA genes. Plant Cell 2019, 31, 1210–1211. [Google Scholar] [CrossRef]
- He, Y.; Lu, C.; Jiang, Z.; Sun, Y.; Liu, H.; Yin, Z. NADH dehydrogenase-like complex L subunit improves salt tolerance by enhancing photosynthetic electron transport. Plant Physiol. Biochem. 2024, 207, 108420. [Google Scholar] [CrossRef]
- Zhang, H.; Zhou, J.F.; Kan, Y.; Shan, J.X.; Ye, W.W.; Dong, N.Q.; Guo, T.; Xiang, Y.H.; Yang, Y.B.; Li, Y.C.; et al. A genetic module at one locus in rice protects chloroplasts to enhance thermotolerance. Science 2022, 376, 1293–1300. [Google Scholar] [CrossRef]
- Chen, S.; Xu, K.; Kong, D.; Wu, L.; Chen, Q.; Ma, X.; Ma, S.; Li, T.; Xie, Q.; Liu, H.; et al. Ubiquitin ligase OsRINGzf1 regulates drought resistance by controlling the turnover of OsPIP2;1. Plant Biotechnol. J. 2022, 20, 1743–1755. [Google Scholar] [CrossRef]
- Zhao, W.; Wen, J.; Zhao, J.; Liu, L.; Wang, M.; Huang, M.; Fang, C.; Liu, Q. E3 ubiquitin ligase OsRFI2 regulates salinity tolerance by targeting ascorbate peroxidase OsAPX8 for its degradation in rice. Rice 2025, 18, 12. [Google Scholar] [CrossRef]
- Park, Y.C.; Chapagain, S.; Jang, C.S. A negative regulator in response to salinity in rice: Oryza Sativa salt-, ABA- and drought-induced RING finger protein 1 (OsSADR1). Plant Cell Physiol. 2018, 59, 575–589. [Google Scholar] [CrossRef]
- Salehin, M.; Li, B.; Tang, M.; Katz, E.; Song, L.; Ecker, J.R.; Kliebenstein, D.J.; Estelle, M. Auxin-sensitive Aux/IAA proteins mediate drought tolerance in Arabidopsis by regulating glucosinolate levels. Nat. Commun. 2019, 10, 4021. [Google Scholar] [CrossRef]
- Wang, F.; Niu, H.; Xin, D.; Long, Y.; Wang, G.; Liu, Z.; Li, G.; Zhang, F.; Qi, M.; Ye, Y.; et al. OsIAA18, an Aux/IAA transcription factor gene, is involved in salt and drought tolerance in rice. Front. Plant Sci. 2021, 12, 738660. [Google Scholar] [CrossRef]
- Iqbal, M.Z.; Liang, Y.; Anwar, M.; Fatima, A.; Hassan, M.J.; Ali, A.; Tang, Q.; Peng, Y. Overexpression of auxin/indole-3-acetic acid gene TrIAA27 enhances biomass, drought, and salt tolerance in Arabidopsis thaliana. Plants 2024, 13, 2684. [Google Scholar] [CrossRef]
- Soltabayeva, A.; Sagi, M. Determination of ROS generated by Arabidopsis xanthine dehydrogenase1 (AtXDH1) using nitroblue tetrazolium (NBT) and 3,3’-diaminobenzidine (DAP). Methods Mol. Biol. 2024, 2798, 65–77. [Google Scholar] [CrossRef]
- Cao, J.; Yao, D.; Lin, F.; Jiang, M. PEG-mediated transient gene expression and silencing system in maize mesophyll protoplasts: A valuable tool for signal transduction study in maize. Acta Physiol. Plant. 2014, 36, 1271–1281. [Google Scholar] [CrossRef]
- Sheen, J. Signal transduction in maize and Arabidopsis mesophyll protoplasts. Plant Physiol. 2001, 127, 1466–1475. [Google Scholar] [CrossRef]
- Chien, C.T.; Bartel, P.L.; Sternglanz, R.; Fields, S. The two-hybrid system: A method to identify and clone genes for proteins that interact with a protein of interest. Proc. Natl. Acad. Sci. USA 1991, 88, 9578–9582. [Google Scholar] [CrossRef]
- Fields, S.; Song, O. A novel genetic system to detect protein-protein interactions. Nature 1989, 340, 245–246. [Google Scholar] [CrossRef]
- Chen, H.; Zou, Y.; Shang, Y.; Lin, H.; Wang, Y.; Cai, R.; Tang, X.; Zhou, J.M. Firefly luciferase complementation imaging assay for protein-protein interactions in plants. Plant Physiol. 2008, 146, 368–376. [Google Scholar] [CrossRef]







Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
© 2026 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license.
Share and Cite
Ma, L.; Li, W.; Zhang, K.; Zhang, Q.; Xu, H.; Wang, B.; Wang, L.; Zou, J. ZmPRN1 Negatively Regulates Salt Stress Tolerance by Modulating ROS Homeostasis in Maize (Zea mays L.). Plants 2026, 15, 1585. https://doi.org/10.3390/plants15101585
Ma L, Li W, Zhang K, Zhang Q, Xu H, Wang B, Wang L, Zou J. ZmPRN1 Negatively Regulates Salt Stress Tolerance by Modulating ROS Homeostasis in Maize (Zea mays L.). Plants. 2026; 15(10):1585. https://doi.org/10.3390/plants15101585
Chicago/Turabian StyleMa, Lei, Wenzong Li, Ke Zhang, Qingyun Zhang, Hua Xu, Baobao Wang, Lei Wang, and Junjie Zou. 2026. "ZmPRN1 Negatively Regulates Salt Stress Tolerance by Modulating ROS Homeostasis in Maize (Zea mays L.)" Plants 15, no. 10: 1585. https://doi.org/10.3390/plants15101585
APA StyleMa, L., Li, W., Zhang, K., Zhang, Q., Xu, H., Wang, B., Wang, L., & Zou, J. (2026). ZmPRN1 Negatively Regulates Salt Stress Tolerance by Modulating ROS Homeostasis in Maize (Zea mays L.). Plants, 15(10), 1585. https://doi.org/10.3390/plants15101585

