The Ubiquitin Switch in Plant Stress Response
Abstract
1. Introduction
2. Protein Turnover by the Plant UPS
3. Crosstalk of Ub with Its Two Siblings, ATG8 and SUMO, in Protein Turnover
4. Reinforcement Intersection of the UPS with ABA in Abiotic Stress Response
5. Multiple UPS Routes Acting Upon DREB2A-Mediated Stress Tolerance
6. Influence of the UPS in Stress Regulation through ROS Homeostasis
7. Role of the UPS in Innate Immune Response
8. Genome Evolution of the Plant UPS and Future Perspective
Author Contributions
Funding
Conflicts of Interest
References
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Species | BTB | F-box * | HECT | RING ** | Sum |
---|---|---|---|---|---|
Arabidopsis halleri | 63 | 850 | 9 | 480 | 1402 |
Arabidopsis lyrate | 77 | 989 | 10 | 542 | 1618 |
Arabidopsis thaliana | 64 | 697 | 7 | 516 | 1284 |
Amborella tricopoda | 56 | 230 | 7 | 314 | 607 |
Brachypodium distachyon | 178 | 813 | 10 | 554 | 1555 |
Brassica rapa | 97 | 975 | 10 | 802 | 1884 |
Boechera stricta | 75 | 505 | 9 | 473 | 1062 |
Capsella rubella | 69 | 970 | 8 | 527 | 1574 |
Leersia perrieri | 110 | 542 | 9 | 460 | 1121 |
Oryza brachyantha | 78 | 264 | 12 | 391 | 745 |
Oryza punctata | 111 | 535 | 8 | 485 | 1139 |
Oryza sativa | 156 | 732 | 8 | 532 | 1428 |
Sorghum bicolor | 158 | 678 | 9 | 563 | 1408 |
Zea mays | 95 | 331 | 20 | 699 | 1145 |
Protein | Accession | Involved Stress Pathway (Substrates) | Protein Family | Reference |
---|---|---|---|---|
ABA Signaling | ||||
AIRP1 | AT4G23450.2 | Positive regulator in ABA-mediated drought tolerance | RING E3 ligase | [46] |
AIRP3 | AT3G09770.1 | E3 ligase for ABI1 degradation (ABI1) | RING E3 ligase | [75] |
AtAIRP4 | AT2G36270.1 | Positive regulator in ABA-mediated drought tolerance | RING E3 ligase | [76] |
AtL61 | AT3G14320.1 | Positive regulator in ABA-mediated drought tolerance | RING-H2 E3 ligase | [47] |
AtPPRt3 | AT1G18470.1 | Positive regulator in ABA-mediated drought tolerance | RING E3 ligase | [77] |
PUB12 | AT2G28830.1 | Drought and immune response (ABI1) | U-box E3 ligase | [78] |
PUB13 | AT3G46510.1 | Drought and immune response (ABI1) | U-box E3 ligase | [79] |
PUB18 | AT1G10560.1 | ABA signaling | U Box E3 ligase | [80] |
PUB19 | AT1G60190.1 | Negative regulator of ABA-mediated drought tolerance | U-box E3 ligase | [81] |
RGLG1 | AT3G01650.1 | Positive regulator of ABA-mediated drought tolerance (PP2CA) | RING E3 ligase | [82] |
UBC27 | AT5G50870.2 | E2 that conjugates with ABI1 | E2 | [75] |
DREB2A-Mediated Stress Tolerance | ||||
BPM | AT1G21780.1 | Thermotolerance (DREB2A) | CRL-BTB E3 ligase | [51] |
SAP5 | AT3G12630.1 | Thermotolerance (DRIP1/2) | A20/AN1 domain containing E3 ligase | [83] |
DRIP1/2 | AT1G06770.1 | Thermotolerance (DREB2A) | RING E3 ligase | [84] |
ROS Homeostasis | ||||
AtCHIP | AT3G07370.1 | Regulator of temperature response (PP2A) | U Box E3 ligase | [85] |
PeCHYR1 | AT5G22920.1 | Positive regulator in ABA-mediated drought tolerance | Ring E3 ligase | [86] |
SP1 | AT1G63900.2 | Chloroplast biogenesis and ROS homeostasis (TOC complex) | RING E3 ligase | [61] |
Innate Immune Response | ||||
COI1 | AT2G39940.1 | Jasmonic acid receptor (JAZ proteins) | SCF CRL E3 ligase | [87] |
CPR1 | AT4G12560.1 | Negative regulator of immunity (SNC1) | SCF CRL E3 ligase | [88,89] |
MIEL1 | AT5G18650.1 | Immune response (MYB30) | RING E3 ligase | [90] |
MUSE1 | AT3G58030.1 | Regulates SIKIC1 (SIKIC1) | RING E3 ligase | [82] |
MUSE2 | AT2G42030.1 | Regulates SIKIC1 (SIKIC1) | RING E3 ligase | [82] |
MUSE3 | AT5G15400.1 | Mediates SNC1 ubiquitylation | E4 ligase | [91] |
NPR1 | AT1G64280.1 | SA receptor | CRL-BTB E3 ligase | [92,93,94] |
NPR3/4 | AT5G45110.1 | SA co-receptor (NPR1) | CRL-BTB E3 ligase | [95] |
PIRE | RBOHD degradation (RBOHD) | RING E3 ligase | [96] | |
PUB12 | AT2G28830.1 | Drought and immune response (FLS2) | U-box E3 ligase | [78] |
PUB13 | AT3G46510.1 | Drought and immune response (LYK5) | U-box E3 ligase | [79] |
RHA2B | AT2G01150.1 | Immune response (MYB30) | RING E3 ligase | [97] |
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Doroodian, P.; Hua, Z. The Ubiquitin Switch in Plant Stress Response. Plants 2021, 10, 246. https://doi.org/10.3390/plants10020246
Doroodian P, Hua Z. The Ubiquitin Switch in Plant Stress Response. Plants. 2021; 10(2):246. https://doi.org/10.3390/plants10020246
Chicago/Turabian StyleDoroodian, Paymon, and Zhihua Hua. 2021. "The Ubiquitin Switch in Plant Stress Response" Plants 10, no. 2: 246. https://doi.org/10.3390/plants10020246
APA StyleDoroodian, P., & Hua, Z. (2021). The Ubiquitin Switch in Plant Stress Response. Plants, 10(2), 246. https://doi.org/10.3390/plants10020246