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Electronics
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  • Open Access

13 January 2023

IoMT with Deep CNN: AI-Based Intelligent Support System for Pandemic Diseases

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1
Department of Computer Science & Engineering, Manipal Institute of Technology, Manipal 576104, India
2
School of Computer Science and Engineering, VIT-AP University, Amaravati 522237, India
3
School of Creative Technologies, University of Bolton, A676 Dean Rd., Bolton BL3 5AB, UK
4
Department of Computer Science & Engineering, Vel Tech Rangarajan Dr. Sagunthala R&D Institute of Science and Technology, Chennai 600062, India
This article belongs to the Special Issue Explainable Artificial Intelligence (XAI) for Healthcare Analytics

Abstract

The Internet of Medical Things (IoMT) is an extended version of the Internet of Things (IoT). It mainly concentrates on the integration of medical things for servicing needy people who cannot get medical services easily, especially rural area people and aged peoples living alone. The main objective of this work is to design a real time interactive system for providing medical services to the needy who do not have a sufficient medical infrastructure. With the help of this system, people will get medical services at their end with minimal medical infrastructure and less treatment cost. However, the designed system could be upgraded to address the family of SARs viruses, and for experimentation, we have taken COVID-19 as a test case. The proposed system comprises of many modules, such as the user interface, analytics, cloud, etc. The proposed user interface is designed for interactive data collection. At the initial stage, it collects preliminary medical information, such as the pulse oxygen rate and RT-PCR results. With the help of a pulse oximeter, they could get the pulse oxygen level. With the help of swap test kit, they could find COVID-19 positivity. That information is uploaded as preliminary information to the designed proposed system via the designed UI. If the system identifies the COVID positivity, it requests that the person upload X-ray/CT images for ranking the severity of the disease. The system is designed for multi-model data. Hence, it can deal with X-ray, CT images, and textual data (RT-PCR results). Once X-ray/CT images are collected via the designed UI, those images are forwarded to the designed AI module for analytics. The proposed AI system is designed for multi-disease classification. It classifies the patients affected with COVID-19 or pneumonia or any other viral infection. It also measures the intensity level of lung infection for providing suitable treatment to the patients. Numerous deep convolution neural network (DCNN) architectures are available for medical image classification. We used ResNet-50, ResNet-100, ResNet-101, VGG 16, and VGG 19 for better classification. From the experimentation, it observed that ResNet101 and VGG 19 outperform, with an accuracy of 97% for CT images. ResNet101 outperforms with an accuracy of 98% for X-ray images. For obtaining enhanced accuracy, we used a major voting classifier. It combines all the classifiers result and presents the majority voted one. It results in reduced classifier bias. Finally, the proposed system presents an automatic test summary report textually. It can be accessed via user-friendly graphical user interface (GUI). It results in a reduced report generation time and individual bias.

1. Introduction

In late 2019, many people were affected by unexplained pneumonia cases that spread quickly across the country and globally. This unknown novel virus created a lot of problems in the human body, such as acute breathing distress, multi-organ failure, cough, smell loss, etc. [1,2]. After long research, the WHO announced that pneumonia was caused by a novel coronavirus infection. It was identified as an international public health emergency in January 2020 by the WHO. Due to the rapid spreading rate of novel coronavirus, more than 618 million of peoples were affected, and 4.9 million of peoples died globally. If we had enough medical infrastructure for early screening, we could limit the mortality rate drastically. The early detection of patients suspected of being infected plays a vital role in the prevention and fight against new cases of corona pneumonia. The arrival of the new COVID-19 delta strain makes the situation worsen, as rates of transmission are notably high. Furthermore, all the countries became stuck in choosing the vaccine. The only opportunity that we have to minimize the spread (and stop it early) is to correctly diagnose the infected individuals. Numerous medical and technical research was conducted for precise diagnosis. Finally, the medical community announced RT-PCR test for finding COVID positivity. Reverse transcription polymerase chain reaction (RT-PCR) is used to determine COVID positivity. Even though RT-PCR is considered a standard diagnosis tool by World Health Organization (WHO), it has an accuracy of only about 80%. The difficulty with RT-PCR is that it yields a negative result if it is performed after the life span of the COVID-19 virus. In such cases, to determine the severity of the infection (stage), CT (computed tomography) and X-ray imaging are commonly utilized in conjunction with RT-PCR to ascertain the intensity level (stage) of the disease and the treatment plan. Some of the challenges in getting timely and accurate treatments are (i) infection interpretation by the radiologist is a very introspective endeavor, invariably prone to individual bias and therapeutic practices. (ii) A lack of medical infrastructure, particularly in rural areas, prevents patients from receiving timely care. In this regard, numerous technical research is performed in deep learning approaches for pneumonia, viral, and COVID-19 prediction and classification. They have taken CT images and X-ray images for training and testing their system. Researchers experimented with lots of AI techniques for better image classification. Though AI techniques, especially neural network architectures, yield better image classification and prediction, for obtaining better results, it needs massive volume of images. In the proposed system, we used deep convolution neural network architectures for image classification. The challenge which we have faced is data collection. As the collected data is not sufficient for getting better accuracy, we used Keras image data generator for generating synthetic data. With the help of data augmentation, we generated sufficient data. It helps to get better classification results. Some researchers are working on evolution and impacts of the diseases. In [3], the authors proposed a logical framework for studying the evolution of neurological diseases using answer set programming (ASP). They have performed exploratory research on ANN and ASP for the evolution of neurological diseases. From the experimentation, it is observed that the combination of ANN and ASP helped to explore the connectome and test the impact of its variations of the neurological diseases. Though, deep convolution neural network architectures provide better accuracy for image classification. Some of the researchers working on quantum convolution neural networks for better classification. To improvise the accuracy of the convolution neural network architectures further, recently many researchers [4,5,6,7] have worked on integration of quantum computing with neural network architectures, which give increased accuracy, especially for image classification. From the study, it was observed that all the systems that were developed were treatment support systems. It would be useful for the medical community in treating the patients and simplifying their tasks. It is not able to address the problems of society directly. We presented an automated system for assisting the people who are affected with COVID-19. As it can generate rapid results, we can stop the spreading rate drastically. It results in reducing the mortality rate with minimal medical infrastructure. The Internet of Things (IoT) is a field of automation. As automation gives precise results, all the fields from retail business to satellite communication are moving towards automation. It becomes an integral part of in every walk of life, and the medical field could no longer be exempted from automation [8]. Though, health care systems are more sensitive, and it completely depends on medical experts’ advice in giving treatments and taking clinical decisions, emerging technologies such as artificial intelligence (AI) break the barrier, due to its accuracy [9]. Furthermore, because of its self-learning characteristics, an AI-based system can also predict the epidemiological pattern. Future forecasting is one of the important features of an AI-based system. It majorly depends on the previous history of clinical data. However, our conventional medical system uses hospital management systems to manage the health records of the patients [10]. These systems create huge amounts of data in varied forms. However, this data is seldom visited and remains untapped. Hence, in this scenario, efforts are necessary to make intelligent decisions. The diagnosis of the diseases using different features or symptoms is complex. One of the effective solutions is to use artificial intelligence techniques to reduce data ambiguity and provide good decision making [11]. In general, the Internet of Things connects different objects (different attributes) together for detailed analysis. It results in the automation of decision making. The Internet of Medical Things (IoMT) is an extended version of IoT. It mainly concentrates on the integration of medical things for servicing the needy people who cannot get medical services easily, especially rural area people and aged peoples living alone. The IoMT creates a platform for collecting medical attributes directly from people (patients) with the help of some sensors or a user interface that will be analyzed by using AI-based techniques [12]. It will give the proper guidelines to the patients and assistance to the medical experts for giving timely treatment to save their lives. In our country, the medical infrastructure is not ample. Especially during the peak period of COVID spread, most of the people lost their lives because of a shortage of medical infrastructure, such as medical equipment’s, doctors, healthcare takers, etc. If we had an option to provide the health care support to the remote/needy people with the help of IoMT, we could have saved most of the lives. Hence, we designed an automated system for pandemic disease prediction for early alarming. The rest of the paper is organized as follows. The related work on IoMT and AI approaches for image classification is discussed in Section 2. The proposed IoMT system design for pandemic diseases is discussed in Section 3. A detailed experimentation for image classification is performed in Section 4. Section 5 discusses conclusion of the work.

3. Proposed System

We have designed an AI-based IoMT treatment support system for COVID-19, as shown in Figure 2. It is not only designed to fix the people who are affected with COVID-19 or not. It can find the SARS family of diseases. It also ranks the severity level of the infection.
Figure 2. Architecture of Proposed IoMT Treatment Support System for COVID-19.
The main objectives of the proposed system are listed as follows:
(1)
Leverage the culmination of cutting-edge technologies to address the vital problems in the health care sector for the common public.
(2)
Design of intelligent data acquisition system.
(3)
Acquire heterogeneous raw data (CT images, RT-PCR results, pulse oxygen rate, X-ray imaging) from various sources, either directly and indirectly, and integrate them contextually to achieve a unified formatted data.
(4)
Design and develop a cloud platform for unified formatted data.
(5)
Design a system for multi-diseases classification (COVID-19/pneumonia/viral infections).
(6)
Develop a model to measure severity level of the lungs to provide suitable treatment to save their lives.
(7)
Present test summary report textually. It can be accessed by a user-friendly GUI.
Figure 3 shows the workflow of the proposed system in a detailed manner. By considering the above objectives, we have designed an AI-based intelligent support system for pandemic diseases. It includes the following phases, as listed below:
Figure 3. Workflow of the proposed IoMT Treatment Support System for COVID–19.
(a)
Intelligent data acquisition system;
(b)
Cloud platform for storing the data;
(c)
Data pre-processing;
(d)
Synthetic data generation;
(e)
Proposed AI-based system for disease classification.

3.1. Intelligent Data Acquisition System

The proposed data acquisition system provides a platform for obtaining medical details directly from the needy/remote people who do not have enough medical infrastructure. We have designed a graphical user interface (GUI), as in Figure 4. It is a common platform in which they can upload their medical details and they can obtain the guidelines and medical assistance.
Figure 4. Graphical User Interface design for data acquisition and report generation.
The proposed system is mainly designed for COVID-19. We have incorporated some basic intelligence into the proposed data acquisition system. At the outset, the user needs to register in the portal with basic details, such as the name of the patient, location, contact number, Aadhaar card details, etc. Once they have registered in the portal, they will be given login credentials. They can upload their details, such as RT-PCR test results and pulse oxygen rate. Then, the intelligent data acquisition system analyzes the data uploaded in the portal. In general, it deals with three cases, as follows.
(1)
Case 1: RT-PCR test results are negative and pulse oxygen rate is not less than the threshold value (90%), then it generated the test report as “Non-COVID-Viral Infection”.
(2)
Case 2: If RT-PCR is negative and pulse oxygen rate is less than the threshold value (90%), it gives a suggestion to upload the CT images/X-ray images based on the available medical infrastructure.
(3)
Case 3: If RT-PCR is positive, it gives a suggestion to take CT scan or X-ray for analyzing intensity level of the diseases. The designed user interface is connected with Google Cloud for detailed medical analysis.

3.2. Cloud Platform

The medical details, which were collected from the intelligent data acquisition system, are stored in cloud storage for detailed medical analysis. Nowadays, we are working with different cloud storage, such as Amazon S3 storage, Google cloud, etc., and Amazon S3 storage provides free storage up to 5 GB. If we need more storage, then we need to pay. In Google cloud, we can store up to 15 GB free of cost. As the Google cloud gives more storage, compared to AWS, free of cost, we have chosen the Google cloud for our implementation. Cloud storage deals with heterogeneous data, such as RT-PCR test results, pulse oxygen rate, X-ray images, and CT images, as shown in Figure 5. RT-PCR and pulse oxygen rate are text data. X-ray images and CT images are image data. As it includes different type of data, it needs data segregation. We are not able to apply the same technique for text data and image data. Hence, data isolation plays a vital role in this research work.
Figure 5. Google Cloud storage for the proposed IoMT system.

3.3. Data Preprocessing

The proposed IoMT system uses AI techniques for detailed medical analysis. Deep convolution neural network architectures are used for training the proposed AI system. It uses a heterogeneous clinical dataset. For training the proposed AI system, clinical data, such as pulse oxygen rate, RT-PCR, X-ray images, and CT images, are collected from historical data sources (ICMR, DBT, Medical Colleges, Scan Centre etc.) and indirect data sources (Kaggle, UCI, GitHub, etc.) as shown in Figure 6 and Figure 7. The raw data from the above data sources is fed to data pre-processing system, which performs the mapping of data in different formats to the prescribed format for analytics. The formatted data is again processed to remove noise and outliers and handle missing data.
Figure 6. Sample CT image Dataset.
Figure 7. Sample X-ray Image Dataset.

3.4. Synthetic Data Generation

We collected the clinical dataset from direct and indirect sources. It consists of 1700 patient records. For training deep convolution neural network architectures, the dataset we collected was not sufficient. Hence, we used Keras Image Data Generator for synthetic data generation. With the help of an image data generator, we generated 7455 synthetic records. Under an image data generator, we used simple techniques such as rotation, flipping, zooming, horizontal shift, and vertical shift, to generate new images. For testing, anonymous real time data were used, which were collected from hospitals and scan centres.

3.5. Proposed AI-Based System for Disease Classification

We have designed AI-based disease diagnosis system for generating a detailed test summary report to the needy/remote peoples in a textual format. The main objective of this module is to generate the medical diagnosis report automatically. It obtains the input from the Google cloud, where the users upload their medical details. We carried out two kinds of data analysis, namely preliminary examination and detailed medical report generation. The preliminary examination is performed by the intelligent GUI with the help of client-side programming. At the beginning, it asks the user to enter RT-PCR test results and pulse oxygen rate. If the system found that the person is affected with a normal viral infection, it just generates the message “Normal—Viral infection only”. If the client-side programming found any abnormality in the preliminary test, it asks the user to enter X-ray/CT images based on the available infrastructure in their location. CT scan centres may not be available in the rural area. Hence, the proposed AI system deals with X-ray and CT images. The proposed AI system focuses on classification techniques to examine patterns and rank the severity of lung infection based on filtered, pre-processed infectious disease data (pure GGO, halo sign, reversed halo sign, bronchial wall thickening septal thickening and/or reticulation, crazy-paving pattern, consolidation, and reticular and/or interlobular septal thickening). The extraction of the clinical attributes of CT images needed for ranking lung infection is performed based on radiologist experience and historical data. A classification system uses more than one deep convolution neural network architecture to obtain better classification. In this paper, we experimented with numerous deep convolution network architectures, such as ResNet 50, ResNet 100, ResNet 101, VGG 16, and VGG 19. Furthermore, a major voting classifier is used for addressing individual model bias. It takes the classification result from majority classifiers, as shown in Figure 8. Finally, the majority will be taken as the classification result. We collected two kinds of datasets, such as X-ray and CT images, for training the machine. They were collected through various sources, such as Kaggle, github, UCI, DBT, hospitals, scan centres, etc. The size of the dataset 1700 and 2200 in CT and X-ray images respectively. However, the collected information is not sufficient to train the machine. Hence, we generated synthetic data using the Keras image data generator. As a result, we obtained 7455 and 8900 in CT and X-ray images. We also obtained increased accuracy, as shown in Table 3 and Table 4. It also includes the affirmation support system. It is a feedback system to improve the accuracy of historical data. This was achieved through medical expert’s suggestions provided to the test results generated by the machine, as shown in Figure 9. The secondary data collected from medical experts can be added to the existing historical data for future use.
Figure 8. Working Principle of Major Voting Classifier.
Table 3. Performance analysis of deep convolution neural network architectures on CT images.
Table 4. Performance analysis of deep convolution neural network architectures on X-ray images.
Figure 9. Working principle of Affirmation Support System.
Once the medical diagnosis performed by the proposed AI system, the test summary report will be generated in textual form. It is communicated to the end user via the designed GUI. It results in a reduced report generation time with minimal medical infrastructure.

4. Experimentation for SARs Virus Classification

Two kinds of datasets, such as CT images and X-ray images, were chosen for the proposed AI system experimentation. The dataset was divided into two parts: training data and testing data. X-ray and CT images were gathered from open sources, such as Kaggle and GitHub. CT scans of pneumonia, COVID-19, and virally infected people were included in the data collection. For training, we used public resources. For testing purposes, real images which we have collected from hospitals were used. Precision, recall, F1-score, and accuracy (see Equations from (1) to (4)) were taken as performance metrics for the proposed AI system evaluation. The performance metrics were computed by using the formula shown below.
Precision = TP TP + FP
Recall = TP TP + FN
F 1 = TP TP + ( 0.5 )   ( FP + FN )
Accuracy = TP + TN TP + TN + FP + FN
where TP—true positive; FP—false positive; FN—false negative; TN—true negative.
For obtaining better accuracy, we experimented with five deep convolution network architectures, such as ResNet 50, ResNet 100, ResNet 101, VGG-19, and VGG-16. With the help of pre-trained models, we can obtain better accuracy with minimal datasets. Pre-trained models are trained models. Hence, it does not require more information. Furthermore, we have implemented a major voting classifier. It takes ‘n’ number of classifier results as input. From that, it will take majority voting, as shown in Figure 8. It results in better accuracy. It also lessens individual classifier bias. In addition to the performance metrics, we have generated heat map for CT and X-ray images. With the help of heat map, we could understand the pulmonary amalgamation in the lungs. It helps to measure intensity level of the severity. Finally, textual reports generated are communicated to the needy/remote people via GUI.

4.1. Experimental Results on CT Images

We have designed an AI-based medical diagnosis system. For obtaining improved accuracy, we have trained the proposed AI system with heterogeneous dataset. The initial screening was performed by designed intelligent GUI. It collects RT-PCR test results and pulse oxygen rate from the public. Based on the initial screening, the GUI collects further details for detailed medical analysis. Initial screening is achieved by front-end programming. In this section, we discussed the AI-based medical diagnosis system on CT images. Dataset was collected from public sources, hospitals, and scan centres. It includes CT images of COVID, pneumonia, normal, and viral infections. Totally, 1700 images were collected. As we have used deep convolution neural network architectures, such as ResNet 50, ResNet 100, ResNet101, VGG 16, and VGG 19, for experimentation, the dataset which we collected was not sufficient to train the machine. Hence, we generated synthetic data with the help of Keras image data generator. As a result of synthetic data generator, we obtained 7455 synthetic images. For testing the model, 100 real time images were used. Major voting classifier takes the result of all the classifiers as input; majority was taken as final classification result. Detailed performance analysis of deep convolution network architectures is given in Table 3. In addition to that, a heat map was generated for analyzing pulmonary amalgamation, as shown in Figure 10.
Figure 10. Heap map and super imposed image for the study of pulmonary amalgamation.

4.2. Experimental Results on X-ray Images

The proposed IoMT treatment support system provides an option to upload CT/X-ray images in the designed GUI. The needy/remote location people can upload CT/X-ray images based on the available facility in their area. In the designed system, the proposed IoMT system will generate the test summary report, instead of radiologist. It results in a reduced report generation time with minimal medical infrastructure. In this section, we discussed the AI-based medical diagnosis system on X-ray images. Dataset was collected from public sources, hospitals, and scan centres. It includes X-ray images of COVID, pneumonia, and normal and viral infections. Totally, 2200 images were collected. As we have used deep convolution neural network architectures, such as ResNet 50, ResNet 100, ResNet101, VGG 16, and VGG 19, for experimentation, the dataset which we have collected was not sufficient to train the machine. Hence, we generated synthetic data with the help of Keras image data generator. As a result of synthetic data generator, we obtained 8900 synthetic images. For testing the model, 226 real time images were used. Major voting classifier takes the result of all the classifiers as input; majority was taken as final classification result. Detailed performance analysis of deep convolution network architectures is given in Table 4. In addition to that, a heat map was generated for analyzing pulmonary amalgamation, as shown in Figure 11.
Figure 11. Heap map and super imposed image for the study of pulmonary amalgamation.

5. Conclusions

In this paper, we have designed an AI-based IoMT treatment support system for COVID-19, in which we have designed a GUI for interfacing the needy/remote location people with the health care system. It provides an option to the public to upload their medical records, such as pulse oxygen rate and RT-PCR results. Based on the initial screening performed by the intelligence GUI, further details will be collected from the people. After that, the collected information is stored in the Google cloud for detailed medical analysis. For detailed medical analysis, we have experimented with numerous deep convolution neural network architectures, such as ResNet50, ResNet 100 ResNet101, VGG 16, and VGG 19. To address individual classifier bias, a major voting classifier is used. A heat map is generated for obtaining pulmonary amalgamation details. Based on that, we ranked the severity level. Finally, a textual report is generated. It is communicated to the concerned via the same GUI that was designed for data acquisition. In future, the designed system can be extended to predict similar kinds of diseases (SARs family), as well. This is achieved by incorporating the epidemiological pattern of the diseases by artificial intelligence methods.

Author Contributions

Conceptualization, S.T.; methodology, S.T. and M.I.M.; validation, M.R. and C.I.; formal analysis, M.I.M. and D.S.; writing—original draft preparation, S.T.; writing—review and editing, M.R. and S.M.; supervision, M.I.M. and A.D. All authors have read and agreed to the published version of the manuscript.

Funding

This research received no external funding.

Data Availability Statement

Data in this research paper will be shared upon request made to the corresponding author.

Acknowledgments

The authors would like to thank Manipal Institute of Technology, Manipal, India, and VIT-AP University, Andhra Pradesh, India, for providing the necessary resources to carried out this research work.

Conflicts of Interest

The authors declare no conflict of interest.

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