Determination of Gentamicin: Development and Validation of a Sensitive UPLC-MS/MS Assay According to the European Medicines Agency Guideline
Abstract
1. Introduction
2. Results and Discussion
2.1. Selectivity
2.2. Specificity
2.3. Matrix Effect
2.4. Calibration Curve and Range
2.5. Accuracy and Precision
2.6. Carry-Over
2.7. Stability
2.8. Robustness
2.9. Method Application
3. Materials and Methods
3.1. Chemicals and Reagents
3.2. Animals and Experimental Procedures
3.3. Preparation of Stock, Calibration, and Quality Control Working Solution
- 1.
- GEN stock solution containing a mixture of the isoforms C1 (23.1%) and C2C2a (39.5%) (2 mg/mL) was prepared in HPLC-grade water. An independent solution for IS (2 mg/mL) was also prepared.
- 2.
- Calibration working solutions containing GEN solution (0.5, 1, 1.5, 2, 2.5, and 3 µg/mL) and IS (1 µg/mL) were then prepared by diluting an appropriate volume of the stock solution in 10 mL of HPLC-grade water.
- 3.
- Quality control working solutions (QC) were prepared at 4 concentration levels, according to the European validation guideline [30]:
- QC1 (LLOQ, lower limit of quantitation): 0.5 µg/mL, which contained 0.1155 µg/mL of GEN C1 isoform and 0.1975 µg/mL of GEN C2C2a isoform.
- QC2 (LOW, three times the LLOQ): 1.5 µg/mL, which contained 0.3465 µg/mL of GEN C1 isoform and 0.5925 µg/mL of GEN C2C2a isoform.
- QC3 (MED, between 30 and 50% of the calibration curve range): 1.75 µg/mL, which contained 0.4023 µg/mL of GEN C1 isoform and 0.6913 µg/mL of GEN C2C2a isoform.
- QC4 (HIGH, at least 75% of the upper calibration curve range): 2.25 µg/mL, which contained 0.5197 µg/mL of GEN C1 isoform and 0.8888 µg/mL of GEN C2C2a isoform.
3.4. Preparation of Analysis Samples
- 1.
- Blank samples: biological matrix (plasma or feces) without GEN and IS (1 mL).
- 2.
- Zero samples: blank sample (0.9 mL plasma or 1 g feces) with 0.1 mL IS.
- 3.
- Calibration standards: 0.9 mL plasma or 1 g feces spiked with 100 µL of each calibration working solution. Thus, the concentrations of the calibration samples were 0.05, 0.1, 0.15, 0.2, 0.25, and 0.3 µg/mL for GEN solution and 0.1 µg/mL for IS.
- 4.
- Quality control samples were also prepared in plasma (0.9 mL) and feces (1 g) with 0.1 µg/mL for IS (0.1 mL) at 4 concentration levels:
- 0.05 µg/mL (QC1): 0.01155 µg/mL of GEN C1 isoform and 0.01975 µg/mL of GEN C2C2a isoform.
- 0.15 µg/mL (QC2): 0.03465 µg/mL of GEN C1 isoform and 0.05925 µg/mL of GEN C2C2a isoform.
- 0.175 µg/mL (QC3): 0.04023 µg/mL of GEN C1 isoform and 0.06913 µg/mL of GEN C2C2a isoform.
- 0.225 µg/mL (QC4): 0.05197 µg/mL of GEN C1 isoform and 0.08888 µg/mL of GEN C2C2a isoform.
3.5. Extraction Method
3.6. UPLC-MS/MS Conditions
3.7. Method Validation
3.7.1. Selectivity
3.7.2. Specificity
3.7.3. Matrix Effect
3.7.4. Calibration Curve and Range
3.7.5. Accuracy and Precision
3.7.6. Carry-Over
3.7.7. Stability
3.7.8. Robustness
3.8. Method Application
3.9. Data Analysis
4. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| AEMPS | Spanish Agency of Medicines and Medical Devices |
| CV | Coefficient of variation |
| EMA | European Medicines Agency |
| GEN | Gentamicin |
| HFBA | Heptafluorobutyric |
| IS | Internal standard |
| LLOQ | Lower limit of quantitation |
| LOD | Limit of detection |
| QC | Quality control |
| SPE | Solid-phase extraction |
| STR | Streptomycin |
| TCA | Trichloroacetic acid |
| TOC | Total organic carbon |
| ULOQ | Upper limit of quantitation |
| UPLC | Ultra-Performance Liquid Chromatography |
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| Plasma | ||
|---|---|---|
| GEN C1 isoform | GEN C2C2a isoform | |
| Calibration curve 1 (R2) | y = 1.6336 x + 0.0899 (0.9858) | y = 1.0892 x − 0.1066 (0.9773) |
| Calibration curve 2 (R2) | y = 1.2438 x + 0.1761 (0.9857) | y = 1.2836 x − 0.0897 (0.9893) |
| Calibration curve 3 (R2) | y = 1.5593 x + 0.0161 (0.9889) | y = 1.6617 x − 0.2323 (0.9903) |
| Feces | ||
| GEN C1 isoform | GEN C2C2a isoform | |
| Calibration curve 1 (R2) | y = 1.9623 x + 0.0391 (0.9809) | y = 1.3492 x − 0.0786 (0.9846) |
| Calibration curve 2 (R2) | y = 1.5576 x − 0.0490 (0.9877) | y = 0.9564 x − 0.1029 (0.9906) |
| Calibration curve 3 (R2) | y = 1.5587 x − 0.0913 (0.9787) | y = 1.8146 x − 0.0848 (0.9886) |
| Plasma | |||
|---|---|---|---|
| LLOQ (µg/mL) | LOD (µg/mL) | Recovery (%) ( ± SD) | |
| GEN C1 isoform | 0.1155 | 0.0831 | 94.3 ± 5.50 |
| GEN C2C2a isoform | 0.1975 | 0.0950 | 94.9 ± 5.10 |
| Feces | |||
| LLOQ (µg/mL) | LOD (µg/mL) | Recovery (%) ( ± SD) | |
| GEN C1 isoform | 0.1155 | 0.0783 | 94.5 ± 2.98 |
| GEN C2C2a isoform | 0.1975 | 0.1030 | 95.4 ± 2.13 |
| Intra-Day (Within-Run) | Inter-Day | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Batch 1 | Batch 2 | Batch 3 | (Between-Run) | ||||||
| CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | ||
| GEN C1 isoform | QC1 | 13.4 | 92.2 | 10.6 | 102.0 | 12.9 | 88.5 | 12.5 | 95.5 |
| QC2 | 8.9 | 104.1 | 7.3 | 105.7 | 8.6 | 100.0 | 7.8 | 104.7 | |
| QC3 | 5.1 | 106.1 | 5.9 | 96.0 | 4.9 | 101.9 | 6.9 | 102.7 | |
| QC4 | 6.6 | 102.5 | 7.0 | 107.6 | 6.4 | 98.4 | 6.7 | 104.2 | |
| GEN C2C2a isoform | QC1 | 1.5 | 116.5 | 5.3 | 115.4 | 11.5 | 111.8 | 3.1 | 116.1 |
| QC2 | 7.9 | 98.3 | 6.5 | 103.3 | 7.5 | 94.4 | 7.3 | 100.0 | |
| QC3 | 8.0 | 98.7 | 9.7 | 96.4 | 7.6 | 94.7 | 8.0 | 97.9 | |
| QC4 | 8.8 | 101.4 | 4.9 | 89.3 | 8.4 | 97.3 | 9.5 | 97.3 | |
| Intra-Day (Within-Run) | Inter-Day | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Batch 1 | Batch 2 | Batch 3 | (Between-Run) | ||||||
| CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | ||
| GEN C1 isoform | QC1 | 3.9 | 83.3 | 6.5 | 85.7 | 2.9 | 90.0 | 5.1 | 85.2 |
| QC2 | 12.6 | 98.5 | 7.6 | 93.1 | 3.2 | 90.7 | 10.2 | 97.1 | |
| QC3 | 3.4 | 94.4 | 5.1 | 101.9 | 6.5 | 96.7 | 6.3 | 98.5 | |
| QC4 | 0.2 | 95.0 | 8.2 | 98.4 | 7.4 | 99.2 | 7.0 | 97.6 | |
| GEN C2C2a isoform | QC1 | 12.3 | 96.5 | 4.0 | 100.3 | 6.1 | 101.7 | 9.2 | 98.8 |
| QC2 | 11.0 | 94.1 | 6.0 | 89.9 | 1.6 | 87.6 | 8.9 | 93.0 | |
| QC3 | 3.0 | 96.3 | 3.3 | 100.9 | 2.5 | 97.7 | 4.3 | 98.4 | |
| QC4 | 10.3 | 105.1 | 6.1 | 93.9 | 8.7 | 102.4 | 10.6 | 98.6 | |
| GEN C1 isoform | GEN C2C2a isoform | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Temperature (°C) | Time | QC2 | QC 4 | QC2 | QC 4 | ||||
| CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | ||
| −20 | 3 days | 6.1 | 110.8 | 6.5 | 112.4 | 6.8 | 87.5 | 6.4 | 107.7 |
| 7 days | 2.3 | 111.4 | 2.8 | 114.3 | 3.0 | 86.9 | 2.4 | 104.6 | |
| 15 days | 3.4 | 113.0 | 7.2 | 113.2 | 7.6 | 88.8 | 3.6 | 97.6 | |
| 1 month | 2.3 | 111.7 | 2.8 | 112 | 2.9 | 90.9 | 2.4 | 92.3 | |
| 2 months | 4.3 | 100.7 | 2.6 | 111.3 | 2.7 | 88.2 | 4.5 | 85.4 | |
| 4 months | 3.7 | 109.5 | 3.3 | 108.3 | 3.5 | 86 | 3.9 | 91.9 | |
| 4 | 24 h before extraction | 1.0 | 102.9 | 0.7 | 109.8 | 0.6 | 91.2 | 1.0 | 94.7 |
| 24 h after extraction | 3.0 | 114.8 | 2.5 | 112.6 | 2.4 | 92.4 | 3.1 | 97.7 | |
| 48 h before extraction | 1.7 | 112.2 | 3.9 | 107.0 | 3.8 | 89.9 | 1.8 | 91.2 | |
| 48 h after extraction | 8.2 | 102.9 | 6.7 | 113.5 | 6.5 | 89.2 | 8.6 | 101.1 | |
| 25 | 24 h before extraction | 3.6 | 107.4 | 3.5 | 113.3 | 3.4 | 85.1 | 3.8 | 104.8 |
| 24 h after extraction | 5.2 | 114.3 | 11.0 | 106.5 | 4.6 | 99.6 | 5.5 | 86.3 | |
| GEN C1 Isoform | GEN C2C2a Isoform | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Temperature (°C) | Time | QC2 | QC 4 | QC2 | QC 4 | ||||
| CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | CV (%) | Accuracy (%) | ||
| −20 | 3 days | 5.8 | 111.4 | 3.3 | 105.3 | 4.1 | 98.0 | 7.6 | 114.7 |
| 7 days | 2.2 | 100.5 | 4.2 | 105.8 | 12.8 | 97.0 | 3.4 | 114.3 | |
| 15 days | 3.2 | 109.2 | 4.1 | 107.3 | 0.8 | 99.4 | 8.5 | 109.4 | |
| 1 month | 2.2 | 110.6 | 5.5 | 106.1 | 2.9 | 101.9 | 3.3 | 103.3 | |
| 2 months | 4.1 | 111.1 | 0.8 | 95.7 | 4.6 | 98.8 | 3.1 | 95.6 | |
| 4 months | 3.5 | 112.7 | 2.9 | 104.0 | 7.8 | 96.3 | 3.9 | 102.9 | |
| 4 | 24 h before extraction | 2.9 | 97.7 | 8.2 | 97.7 | 9.2 | 102.2 | 0.7 | 106.1 |
| 24 h after extraction | 2.8 | 109.1 | 3.6 | 109.1 | 3.5 | 103.5 | 2.7 | 109.4 | |
| 48 h before extraction | 1.6 | 106.6 | 9.2 | 106.6 | 3.3 | 100.7 | 4.2 | 102.1 | |
| 48 h after extraction | 7.8 | 97.8 | 3.5 | 97.8 | 4.2 | 99.9 | 7.2 | 113.2 | |
| 25 | 24 h before extraction | 3.5 | 102.1 | 4.6 | 107.6 | 8.2 | 95.3 | 3.8 | 106.9 |
| 24 h after extraction | 5.0 | 108.5 | 7.8 | 108.5 | 3.6 | 111.6 | 5.1 | 96.7 | |
| Mobile phase | Mobile phase A = ultrapure water with 0.26% HFBA Mobile phase B = acetonitrile with 0.26% HFBA | ||
| Flow rate | 0.5 mL/min | Sampler temperature (°C) | 8 °C |
| Column temperature (°C) | 40 °C | Injection volume | 30 µL |
| Gradient program | Time (min) | Mobile phase A | Mobile phase B |
| 0 | 80 | 20 | |
| 5.2 | 0 | 100 | |
| 9 | 0 | 100 | |
| 14 | 80 | 20 | |
| 17 | 80 | 20 | |
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Diez, R.; Vazquez, E.M.; Romero, B.; de la Puente, R.; Fernandez, N.; Sahagun, A.M.; Diez, M.J.; Lopez, C. Determination of Gentamicin: Development and Validation of a Sensitive UPLC-MS/MS Assay According to the European Medicines Agency Guideline. Antibiotics 2026, 15, 130. https://doi.org/10.3390/antibiotics15020130
Diez R, Vazquez EM, Romero B, de la Puente R, Fernandez N, Sahagun AM, Diez MJ, Lopez C. Determination of Gentamicin: Development and Validation of a Sensitive UPLC-MS/MS Assay According to the European Medicines Agency Guideline. Antibiotics. 2026; 15(2):130. https://doi.org/10.3390/antibiotics15020130
Chicago/Turabian StyleDiez, Raquel, Eva M. Vazquez, Beatriz Romero, Raul de la Puente, Nelida Fernandez, Ana M. Sahagun, M. Jose Diez, and Cristina Lopez. 2026. "Determination of Gentamicin: Development and Validation of a Sensitive UPLC-MS/MS Assay According to the European Medicines Agency Guideline" Antibiotics 15, no. 2: 130. https://doi.org/10.3390/antibiotics15020130
APA StyleDiez, R., Vazquez, E. M., Romero, B., de la Puente, R., Fernandez, N., Sahagun, A. M., Diez, M. J., & Lopez, C. (2026). Determination of Gentamicin: Development and Validation of a Sensitive UPLC-MS/MS Assay According to the European Medicines Agency Guideline. Antibiotics, 15(2), 130. https://doi.org/10.3390/antibiotics15020130

