Comparison of Antimicrobial Treatment Incidence Quantification Based on Detailed Field Data on Animal Level with the Standardized Methodology of the European Medicines Agency in Veal Calves, Switzerland, 2016–2018
Abstract
:1. Introduction
2. Material and Methods
2.1. Data Collection and Treatment Recording
2.2. Treatment Incidence Quantification
2.3. TI Quantification Based on Data from the Swiss Veterinary Medicines Compendium (TIswiss)
2.4. Treatment Incidence Quantification with the EMA Method (TIDDD)
2.5. Statistical Analyses
3. Results
4. Discussion
5. Conclusions
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Agreement between TIswiss and TIDDD Methods | Antimicrobial Class | n 3 | Sum of TIswiss (Days) | % of Total TIswiss 4 | Sum of TIDDD (Days) | % of Total TIDDD 5 | Median of Q | IQR of Q |
---|---|---|---|---|---|---|---|---|
Discrepancy > 25% (TIDDD < TIswiss) | Macrolides | 372 | 3157 | 25.5 | 1548.91 | 12.4 | 1.94 | 1.56–7.42 |
Sulfonamides | 343 | 2499 | 20.2 | 1351.75 | 10.8 | 1.87 | 1.42–2.33 | |
TIswiss in good agreement with TIDDD (maximal discrepancy ≤ 25%) | Phenicols | 10 | 43.26 | 0.4 | 36.71 | 0.3 | 1.16 | 1.16–1.16 |
Amino- glycosides | 32 | 150 | 1.2 | 140.87 | 1.1 | 1.14 | 0.80–2.07 | |
Florfenicols | 101 | 330.93 | 2.7 | 439.64 | 3.5 | 1.07 | 0.57–1.16 | |
Tetracyclines | 593 | 4017 | 32.5 | 5682.93 | 45.6 | 0.80 | 0.63–0.92 | |
Penicillins | 292 | 1638 | 13.3 | 2383.37 | 19.1 | 0.76 | 0.49–0.95 | |
Discrepancy > 25% (TIDDD > TIswiss) | Fluoro- quinolones | 51 | 143 | 1.2 | 238.53 | 1.9 | 0.72 | 0.48–1.74 |
Diamino- pyrimidins | 60 | 379 | 3.1 | 636.43 | 5.1 | 0.60 | 0.58–0.60 | |
Sum 6 | 1854 | 12,357.19 | 100.1 | 12,459.14 | 99.8 | |||
Sum | 1079 | 6322.19 | 51.3 | 8922.05 | 71.5 |
Agreement between TIswiss and TIDDD Methods | Drug | Antimicrobial Class | n 3 | Sum of TIswiss (Days) | % of Total TIswiss 4 | Sum of TIDDD (Days) | % of Total TIDDD 5 | Median of Q | IQR of Q |
---|---|---|---|---|---|---|---|---|---|
Discrepancy > 25% (TIDDD < TIswiss) | Tylosin | Macrolides | 222 | 1735 | 14.1 | 368.64 | 3.0 | 7.39 | 5.47–8.04 |
Spiramycine | Macrolides | 91 | 917 | 7.4 | 516.16 | 4.2 | 1.94 | 1.94–1.94 | |
Sulfadimidine | Sulfonamides | 278 | 2109 | 17.1 | 1037.98 | 8.4 | 1.89 | 1.50–2.69 | |
TIswiss in good agreement with TIDDD (maximal discrepancy ≤ 25%) | Phthalylsulfathiazole | Sulfonamides | 56 | 370 | 3.0 | 301.49 | 2.4 | 1.25 | 1.20–1.25 |
Tilmicosin | Macrolides | 13 | 39 | 0.3 | 37.14 | 0.3 | 1.20 | 0.96–1.20 | |
Tulathromycin | Macrolides | 46 | 466 | 3.8 | 626.97 | 5.0 | 1.20 | 0.78–1.20 | |
Florfenicol | Phenicols | 10 | 43.26 | 0.4 | 36.71 | 0.3 | 1.16 | 1.16–1.16 | |
Dehydro- streptomycin | Aminoglycosides | 30 | 145 | 1.2 | 138.82 | 1.1 | 1.07 | 0.80–1.90 | |
Florfenicol | Florfenicols | 101 | 330.93 | 2.7 | 439.64 | 3.5 | 1.07 | 0.57–1.16 | |
Marbofloxacin | Fluoroquinolones | 31 | 80 | 0.6 | 97.33 | 0.8 | 0.90 | 0.72–1.80 | |
Oxy- tetracycline | Tetracyclines | 207 | 813 | 6.6 | 1086.86 | 8.7 | 0.87 | 0.52–1.14 | |
Amoxicillin | Penicillins | 223 | 1389.5 | 11.3 | 1910.6 | 15.4 | 0.82 | 0.64–0.95 | |
Doxycycline | Tetracyclines | 77 | 558 | 4.5 | 1069.52 | 8.6 | 0.80 | 0.80–0.80 | |
Chlor- tetracycline | Tetracyclines | 309 | 2646 | 21.5 | 3526.55 | 28.4 | 0.78 | 0.63–0.92 | |
Discrepancy > 25% (TIDDD > TIswiss) | Trimethoprim | Diamino-pyrimidins | 60 | 379 | 3.1 | 636.43 | 5.1 | 0.60 | 0.58–0.60 |
Procaine benzylpenicillin | Penicillins | 64 | 232 | 1.9 | 456.08 | 3.7 | 0.49 | 0.35–0.75 | |
Danofloxacin | Fluoroquinolones | 19 | 61 | 0.5 | 138.22 | 1.1 | 0.47 | 0.34–0.63 | |
Sum 6 | 1837 | 12313.69 | 100 | 12425.14 | 100 | ||||
Sum | 1103 | 6880.69 | 55.9 | 9271.63 | 74.5 |
Agreement between TIswiss and TIDDD Methods | Drug | Antimircrobial Class | n 3 | Sum of TIswiss (Days) | % of Total TIswiss 4 | Sum of TIDDD (Days) | % of Total TIDDD 5 | Median of Q | IQR of Q |
---|---|---|---|---|---|---|---|---|---|
Discrepancy > 25% (TIDDD < TIswiss) | Tylosin | Macrolides | 218 | 1729 | 17.4 | 361.72 | 3.9 | 7.39 | 5.47–8.04 |
Spiramycine | Macrolides | 91 | 917 | 9.2 | 516.16 | 5.6 | 1.94 | 1.94–1.94 | |
Sulfadimidine | Sulfonamides | 276 | 2105 | 21.1 | 1035.8 | 11.3 | 1.89 | 1.50–2.69 | |
TIswiss in good agreement with TIDDD (maximal discrepancy ≤ 25%) | Phthalyl- sulfathiazole | Sulfonamides | 56 | 370 | 3.7 | 301.49 | 3.3 | 1.25 | 1.20–1.25 |
Amoxicillin | Penicillins | 197 | 1267.5 | 12.7 | 1749.05 | 19 | 0.82 | 0.64–0.95 | |
Doxycycline | Tetracyclines | 77 | 558 | 5.6 | 1069.52 | 11.6 | 0.80 | 0.80–0.80 | |
Chlor- tetracycline | Tetracyclines | 309 | 2646 | 26.6 | 3526.55 | 38.4 | 0.78 | 0.63–0.92 | |
Discrepancy > 25% (TIDDD > TIswiss) | Trimethoprim | Diaminopyrimidins | 55 | 368 | 3.7 | 622.67 | 6.8 | 0.60 | 0.58–0.60 |
Sum 6 | 1279 | 9960.5 | 100 | 9182.96 | 99.9 | ||||
Sum | 639 | 4841.5 | 48.6 | 6646.61 | 72.3 |
Agreement between TIswiss and TIDDD Methods | Drug | Antimircrobial Class | n 3 | Sum of TIswiss (Days) | % of Total TIswiss 4 | Sum of TIDDD (Days) | % of Total TIDDD 5 | Median of Q | IQR of Q |
---|---|---|---|---|---|---|---|---|---|
TIswiss in good agreement with TIDDD (maximal discrepancy ≤ 25%) | Tilmicosin | Macrolides | 13 | 39 | 1.7 | 37.14 | 1.2 | 1.20 | 0.96–1.20 |
Tulathro- mycin | Macrolides | 46 | 466 | 20 | 626.97 | 19.5 | 1.20 | 0.78–1.20 | |
Florfenicol | Phenicols | 10 | 43.26 | 1.9 | 36.71 | 1.1 | 1.16 | 1.16–1.16 | |
Dehydro- streptomcin | Aminoglycosides | 30 | 145 | 6.2 | 138.82 | 4.3 | 1.07 | 0.80–1.90 | |
Florfenicol | Florfenicols | 101 | 330.93 | 14.2 | 439.64 | 13.7 | 1.07 | 0.57–1.16 | |
Marbo- floxacin | Fluoroquinolones | 31 | 80 | 3.4 | 97.33 | 3 | 0.90 | 0.72–1.80 | |
Discrepancy > 25% (TIDDD > TIswiss) | Amoxicillin | Penicillins | 26 | 122 | 5.2 | 161.55 | 5 | 0.89 | 0.68–0.89 |
Oxy- tetracycline | Tetracyclines | 207 | 813 | 34.9 | 1086.86 | 33.8 | 0.87 | 0.52–1.14 | |
Procaine benzylpenicillin | Penicillins | 64 | 232 | 9.9 | 456.08 | 14.2 | 0.49 | 0.35–0.76 | |
Danofloxacin | Fluoroquinolones | 19 | 61 | 2.6 | 138.22 | 4.3 | 0.47 | 0.34–0.63 | |
Sum 6 | 547 | 2332.19 | 100 | 3219.32 | 100.1 | ||||
Sum | 464 | 2039.19 | 87.5 | 2625.02 | 81.6 |
Agreement between TIswiss and TIDDD Methods | Farm ID | n 3 | Sum of TIswiss (Days) | % of Total TIswiss 4 | Sum of TIDDD (Days) | % of Total TIDDD 5 | Median of Q | IQR of Q |
---|---|---|---|---|---|---|---|---|
Discrepancy > 25% (TIDDD < TIswiss) | 23 | 44 | 292.75 | 2.4 | 103.09 | 0.8 | 7.00 | 2.35–27.33 |
24 | 19 | 93 | 0.8 | 49.55 | 0.4 | 2.00 | 1.73–2.67 | |
34 | 22 | 102.15 | 0.8 | 77.9 | 0.6 | 1.78 | 0.80–2.17 | |
3 | 46 | 256.41 | 2.1 | 272.98 | 2.2 | 1.30 | 0.92–1.80 | |
35 | 101 | 756 | 6.2 | 716.56 | 5.8 | 1.30 | 0.63–4.98 | |
TIswiss in good agreement with TIDDD (maximal discrepancy ≤ 25%) | 21 | 221 | 1575 | 12.9 | 1630.22 | 13.3 | 1.20 | 0.80–1.25 |
18 | 17 | 41 | 0.3 | 33.28 | 0.3 | 1.17 | 0.65–3.50 | |
27 | 152 | 1400 | 11.4 | 1180.39 | 9.6 | 1.16 | 0.92–1.94 | |
25 | 230 | 1835.21 | 15.0 | 1397.21 | 11.4 | 1.14 | 0.89–2.69 | |
32 | 41 | 259 | 2.1 | 253.25 | 2.1 | 1.14 | 0.95–1.14 | |
33 | 19 | 44.5 | 0.4 | 46.62 | 0.4 | 1.08 | 0.87–1.08 | |
36 | 130 | 858 | 7.0 | 709.91 | 5.8 | 1.05 | 0.80–2.06 | |
37 | 64 | 431 | 3.5 | 352.17 | 2.9 | 0.96 | 0.85–2.06 | |
9 | 19 | 113.5 | 0.9 | 93.76 | 0.8 | 0.93 | 0.78–2.33 | |
38 | 165 | 711.56 | 5.8 | 825.21 | 6.7 | 0.90 | 0.63–1.89 | |
6 | 22 | 73.76 | 0.6 | 91.95 | 0.8 | 0.87 | 0.57–1.11 | |
17 | 11 | 34 | 0.3 | 33.31 | 0.3 | 0.87 | 0.56–16.21 | |
28 | 19 | 108.5 | 0.9 | 145.31 | 1.2 | 0.87 | 0.64–0.87 | |
31 | 70 | 494 | 4.0 | 558.5 | 4.6 | 0.87 | 0.61–1.30 | |
22 | 23 | 220 | 1.8 | 293.51 | 2.4 | 0.82 | 0.71–0.82 | |
26 | 44 | 161.5 | 1.3 | 226.45 | 1.8 | 0.81 | 0.54–1.30 | |
29 | 176 | 1380.63 | 11.3 | 1508.42 | 12.3 | 0.80 | 0.64–1.90 | |
16 | 16 | 68 | 0.6 | 94.89 | 0.8 | 0.77 | 0.63–0.98 | |
Overestimation of TI by >25% | 20 | 14 | 59.89 | 0.5 | 99.02 | 0.8 | 0.66 | 0.46–0.94 |
39 | 67 | 521.82 | 4.3 | 602.72 | 4.9 | 0.63 | 0.47–1.40 | |
5 | 24 | 143.63 | 1.2 | 378.22 | 3.1 | 0.52 | 0.32–0.80 | |
14 | 15 | 42.5 | 0.3 | 92.68 | 0.8 | 0.42 | 0.35–0.52 | |
15 | 13 | 53.5 | 0.4 | 137.16 | 1.1 | 0.38 | 0.38–0.38 | |
40 | 23 | 66.25 | 0.5 | 124.22 | 1.0 | 0.35 | 0.35–0.89 | |
19 | 11 | 46.63 | 0.4 | 128.38 | 1.0 | 0.34 | 0.34–0.37 | |
Sum 6 | 1838 | 12,243.69 | 100 | 12,256.84 | 100 | |||
Sum | 1439 | 9809.16 | 80.1 | 9474.36 | 77.5 |
Administration Route | Drug | Antimicrobial Class | n 3 | Mean Daily Dose | DDD |
---|---|---|---|---|---|
Oral Use | Tylosin | Macrolides | 218 | 6.09 | 41 |
Sulfadimidin | Sulfonamides | 221 | 34.17 | 105 | |
Spiramycine | Macrolides | 91 | 14.21 | 35 | |
Sulfadimidin * | Sulfonamides | 55 | 14.6 | 30 | |
Phthalylsulfathiazole * | Sulfonamides | 56 | 14.74 | 25 | |
Chlortetracycline | Tetracyclines | 309 | 21.35 | 22 | |
Amoxicillin | Penicillins | 197 | 20.72 | 20 | |
Trimethoprim * | Diaminopyrimidins | 55 | 5.84 | 4.8 | |
Doxycycline | Tetracyclines | 77 | 12.92 | 10 | |
Parenteral Use | Tilmicosin | Macrolides | 13 | 2.45 | 4 |
Dehydrostreptomycin | Aminoglycosides | 30 | 15.5 | 25 | |
Marbofloxacin | Fluoroquinolones | 31 | 2.66 | 3.6 | |
Tulathromycin | Macrolides | 46 | 0.25 | 0.3 | |
Amoxicillin | Penicillins | 26 | 7.17 | 8.3 | |
Oxytetracycline | Tetracyclines | 207 | 5.72 | 6.5 | |
Florfenicol | Florfenicols | 101 | 11.68 | 13 | |
Danofloxacin | Fluoroquinolones | 19 | 2.59 | 1.9 |
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Becker, J.; Meylan, M. Comparison of Antimicrobial Treatment Incidence Quantification Based on Detailed Field Data on Animal Level with the Standardized Methodology of the European Medicines Agency in Veal Calves, Switzerland, 2016–2018. Antibiotics 2021, 10, 832. https://doi.org/10.3390/antibiotics10070832
Becker J, Meylan M. Comparison of Antimicrobial Treatment Incidence Quantification Based on Detailed Field Data on Animal Level with the Standardized Methodology of the European Medicines Agency in Veal Calves, Switzerland, 2016–2018. Antibiotics. 2021; 10(7):832. https://doi.org/10.3390/antibiotics10070832
Chicago/Turabian StyleBecker, Jens, and Mireille Meylan. 2021. "Comparison of Antimicrobial Treatment Incidence Quantification Based on Detailed Field Data on Animal Level with the Standardized Methodology of the European Medicines Agency in Veal Calves, Switzerland, 2016–2018" Antibiotics 10, no. 7: 832. https://doi.org/10.3390/antibiotics10070832
APA StyleBecker, J., & Meylan, M. (2021). Comparison of Antimicrobial Treatment Incidence Quantification Based on Detailed Field Data on Animal Level with the Standardized Methodology of the European Medicines Agency in Veal Calves, Switzerland, 2016–2018. Antibiotics, 10(7), 832. https://doi.org/10.3390/antibiotics10070832