Ediacaran Thermal Disturbance in the NW Amazonian Craton: Insights from Zircon and Apatite U–Pb Geochronology of the Guaviare Complex, Colombia
Abstract
1. Introduction
2. Geological Framework

2.1. The Guaviare Complex
2.2. San José Del Guaviare Nepheline Syenite
3. Materials and Methods
| U-Pb Apatite and Zircon Analyses | |
|---|---|
| Laboratory & Sample Preparation | |
| Laboratory name | Plateforme GeOHeLiS, Géosciences Rennes/OSUR, Univ. Rennes |
| Sample type/mineral | Apatite/Zircon |
| Sample preparation | Conventional mineral separation, 1 inch epoxy mount, 1 mm polish to finish |
| Laser ablation system | |
| Make, Model & type | ESI NWR193UC, Excimer |
| Ablation cell | ESI NWR TwoVol2 |
| Laser wavelength | 193 nm |
| Pulse width | <5 ns |
| Fluence | 5 (apatite) or 6 (zircon) J/cm−2 |
| Repetition rate | 5 (apatite) or 4 (zircon) Hz |
| Spot size | 50 (apatite) or 25 (zircon) μm (round spot) |
| Sampling mode/pattern | Single spot |
| Carrier gas | 100% He, Ar make-up gas and N2 (3 mL/min) combined using in-house smoothing device |
| Background collection | 15 s |
| Ablation duration | 40 s |
| Wash-out delay | 10 s |
| Cell carrier gas flow (He) | 0.70 L/min |
| ICP-MS Instrument | |
| Make, Model & type | Agilent 7700x, Q-ICP-MS |
| Sample introduction | Via conventional tubing |
| RF power | 1350 W |
| Sampler, skimmer cones | Ni |
| Extraction lenses | X type |
| Make-up gas flow (Ar) | 0.70 L/min |
| Detection system | Single collector secondary electron multiplier |
| Data acquisition protocol | Time-resolved analysis |
| Scanning mode | Peak hopping, one point per peak |
| Detector mode | Pulse counting, dead time correction applied, and analog mode when signal intensity > ~106 cps |
| Masses measured | 204(Hg + Pb), 206Pb, 207Pb, 208Pb, 232Th, 238U. |
| Integration time per peak | 10–30 ms |
| Sensitivity/Efficiency | 21,000 cps/ppm Pb (50 µm, 10 Hz) |
| Dwell time per isotope | 10–30 ms depending on the masses |
| Data Processing | |
| Calibration strategy | Apatite: Madagascar used as primary reference material, Durango and McClure used as secondary reference material (quality control) Zircon: GJ-1 zircon used as primary reference material, 91500 and Plesovice zircon used as secondary reference material (quality control) |
| Reference Material info | Madagascar [31] Durango [34] McClure [33] GJ-1 [28] 91500 [29] Plesovice [30] |
| Data processing package used | Iolite v.4.7, VizualAge_UComPbine DRS [35] for apatite, U-Pb Geochronology DRS [36] for zircon. |
| Mass discrimination | Standard-sample bracketing with 207Pb/206Pb, 206Pb/238U and 207Pb/235U normalized to reference material |
| Common Pb correction | No common Pb correction for zircon. Madagascar apatite primary standard is corrected for common Pb. |
| Uncertainty level and propagation | Ages are quoted at 2 sigma, propagation is by quadratic addition according to Horstwood et al. [38]. |
| Quality control/Validation | All control materials are in the reference age range, see data table |
4. Results
4.1. Zircon Geochronology
4.2. Apatite Geochronology
5. Discussion
5.1. Guaviare Complex Protolith Formation
5.2. Evidence for Mesoproterozoic Metamorphism
5.3. Ediacaran Thermal Disturbance Recorded by Apatite
5.4. Tectonometamorphic Implications for the Breakup of Rodinia and Gondwana Assembly

6. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| AMC | Amazonian Craton |
| RNJP | Rio Negro-Juruena Province |
References
- López, C.A.; Álvarez, J.J.R.; Scharff, M.W.; Jiménez, F.A.C.; Botelho, N.F.; Mejía, M.I.; Sánchez, M.M.; Parra, O.M.P.; Cárdenas, C.R. The Guaviare Complex: New evidence of Mesoproterozoic (ca. 1.3 Ga) crust in the Colombian Amazonian Craton. Boletín Geol. 2020, 34, 5–34. [Google Scholar] [CrossRef]
- Franco, J.A.; Cramer, T.; Bonilla, A.; Santos, M.; López, R.; Trujillo, J. Edad U-Pb LA-ICP-MS en circones de las areniscas de la Formación San José en Ciudad de Piedra y de neises Mesoproterozoicos en Guaviare, Colombia. Boletín Geol. 2022, 44, 15–37. [Google Scholar]
- Maya, M.; Amaya, C.; Restrepo, J.; Duque, J.; Palacio, A.; Gutiérrez, P.; Pérez, O.; Ríos, C.; Arias, E.; Bedoya, J. Memoria Explicativa de la Plancha 372—El Retorno; Servicio Geológico Colombiano: Bogotá, Colombia, 2018; 330p. [Google Scholar]
- Moyano Nieto, I.; Prieto, G.; Ibañez-Mejia, M. Tectonic domains in the NW Amazonian Craton from geophysical and geological data. Precambrian Res. 2022, 377, 106735. [Google Scholar] [CrossRef]
- Etayo, F.; Buenaventura, J.; Vargas, R.; Espinosa, A.; Nuñez, A.; Gonzalez, H.; Orrego, A. Mapa Geológico de Colombia, Scale 1:1’000,000; Instituto Nacional de Investigaciones Geológico-Mineras (INGEOMINAS): Bogotá, Colombia, 1986. [Google Scholar]
- Galvis Vergara, J.; Huguett, A.; Ruge, P. Geología de la Amazonía Colombiana. Boletín Geol. 1979, 22, 3–86. [Google Scholar]
- Kroonenberg, S.B. The proterozoic basement of the Western Guiana Shield and the Northern Andes. Front. Earth Sci. 2019, 115–192. [Google Scholar] [CrossRef]
- Rocha, J.A.M.; Piraquive, A.; Victoria, J.A.F.; Pérez, A.B.; Urueña, L.M.P.; Cramer, T.H.; Rocha, L.d.P.R.; Escalante, N.V. Megacircones ediacáricos de la sienita nefelínica de San José del Guaviare y su potencial como material de referencia para datación U/Pb mediante LA-ICP-MS. Boletín Geol. 2019, 45, 5–22. [Google Scholar] [CrossRef]
- Meert, J.G.; Powell, C.M. Assembly and breakup of Rodinia: An introduction to the special volume. Precambrian Res. 2001, 110, 1–8. [Google Scholar] [CrossRef]
- Lee, J.K.W.; Williams, I.S.; Ellis, D.J. Pb, U and Th diffusion in natural zircon. Nature 1997, 390, 159–162. [Google Scholar] [CrossRef]
- Chew, D.M.; Spikings, R.A. Geochronology and Thermochronology Using Apatite: Time and Temperature, Lower Crust to Surface. Elements 2015, 3, 189–194. [Google Scholar] [CrossRef]
- Bonilla, A.; Franco Victoria, J.A.; Cramer, T.; De Grave, J.; Nachtergaele, S.; Cogné, N.; Piraquive, A. The NW Amazonian Craton in Guainía and Vaupés departments, Colombia: Evidence of a Mesoproterozoic thermal event from apatite LA-ICP-MS U-Pb geochronology and its relation to continental rifting. Precambrian Res. 2023, 395, 107148. [Google Scholar] [CrossRef]
- Kirkland, C.L.; Yakymchuk, C.; Szilas, K.; Evans, N.; Hollis, J.; McDonald, B.; Gardiner, N.J. Apatite: A U-Pb thermochronometer or geochronometer. Lithos 2018, 318–319, 143–157. [Google Scholar] [CrossRef]
- Geraldes, M.; Tavares, A.; Santos, A. An Overview of the Amazonian Craton Evolution: Insights for Paleocontinental Reconstruction. Int. J. Geosci. 2015, 06, 1060–1076. [Google Scholar] [CrossRef]
- Tassinari, C.C.G.; Macambira, M.J.B. Geochronological provinces of the Amazonian Craton. Episodes 1999, 22, 174–182. [Google Scholar] [CrossRef] [PubMed]
- Bonilla, A.; Cramer, T.; Hernandez, L.A. The NW-Amazonian Craton in Colombia: A Paleo-Mesoproterozoic review. J. S. Am. Earth Sci. 2025, 168, 15. [Google Scholar] [CrossRef]
- Ibañez Mejia, M.; Ruiz, J.; Valencia, V.; Cardona, A.; Gehrels, G.; Mora, A. The Putumayo Orogen of Amazonia and its implications for Rodinia reconstructions: New U–Pb geochronological insights into the Proterozoic tectonic evolution of northwestern South America. Precambrian Res. 2011, 191, 58–77. [Google Scholar] [CrossRef]
- Ramos, V. The Grenville-age basement of the Andes. J. S. Am. Earth Sci. 2011, 29, 77–91. [Google Scholar] [CrossRef]
- Cordani, U.G.; Cardona, A.; Jiménez, D.; Liu, D.; Nutman, A.P. Geochronology of Proterozoic basement inliers from the Colombian Andes: Tectonic history of remnants from a fragmented Grenville belt. In Terrane Processes at the Margins of Gondwana; Vaughan, A.P.M., Leat, P.T., Pankhurst, R.J., Eds.; Special Publication; Geological Society of London: London, UK, 2005; Volume 246, pp. 329–346. [Google Scholar]
- Gómez, J.; Montes, N.E.; Marín, E. Compiladores. In Mapa Geológico de Colombia 2023. Escala 1:1 500 000; Servicio Geológico Colombiano: Bogotá, Columbia, 2023. [Google Scholar]
- Cordani, U.G.; Sato, K.; Sproessner, W.; Fernandes, F.S. U-Pb zircon ages of rocks from the Amazonas Territory of Colombia and their bearing on the tectonic history of the NW sector of the Amazonian Craton. Braz. J. Geol. 2016, 46, 5–35. [Google Scholar] [CrossRef]
- Bonilla, A.; Cramer, T.; Poujol, M.; Cano, H.; Franco, J.A.; Amaya, Z. Petrografía, geoquímica y geocronología U/Pb en circones de rocas ígneas y metamórficas a lo largo del Río Cuiarí en Guainía, Colombia. Boletín Geol. 2019, 41, 55–84. [Google Scholar] [CrossRef]
- Bonilla, A.; Cramer, T.; De Grave, J.; Alessio, B.; Glorie, S.; Kroonenberg, S. The NW Amazonian Craton in Guainía and Vaupes departments, Colombia: Transition between orogenic to anorogenic environments during the Paleo-Mesoproterozoic. Precambrian Res. 2021, 360, 106223. [Google Scholar] [CrossRef]
- Ibañez Mejia, M. The Putumayo Orogen of Amazonia: A Synthesis. In The Geology of Colombia, Volume 1 Proterozoic—Paleozoic; Servicio Geológico Colombiano: Bogotá, Columbia, 2020; pp. 101–131. [Google Scholar] [CrossRef]
- Arango Mejía, M.I.; García, G.Z.; Martens, U. Caracterización Petrográfica, Geoquímica y Edad de la Sienita Nefelínica de San José Del Guaviare. Boletín Geol. 2012, 34, 15–26. [Google Scholar]
- Pinson, W.H.; Hurley, P.M.; Mencher, E.; Fairbairn, H.W. K-Ar and Rb-Sr Ages of Biotites from Colombia, South America. Geol. Soc. Am. Bull. 1962, 73, 907–910. [Google Scholar] [CrossRef]
- Franco, J.A.; Muñoz, J.A.; Piraquive, A.; Bonilla, A.; Amaya, Z.; Cramer, T.; Campos, H. Geochronology of the Nepheline Syenite of el Jordán, Guaviare Colombia, evidences of Neoproterozoic-Cambrian intraplate magmatism and itsimplications during Pan-African tectonics in western Gondwana. In EGU General Assembly Conference Abstracts; EGU: Vienna, Austria, 2018; Volume 20. [Google Scholar]
- Jackson, S.E.; Pearson, N.J.; Griffin, W.L.; Belousova, E.A. The application of laser ablation-inductively coupled plasma-mass spectrometry to in situ U–Pb zircon geochronology. Chem. Geol. 2004, 211, 47–69. [Google Scholar] [CrossRef]
- Wiedenbeck, M.A.; Alle, P.; Corfu, F.; Griffin, W.L.; Meier, M.; Oberli, F.V.; von Quadt, A.; Roddick, J.C.; Spiegel, W. Three Natural Zircon Standards for U-Th-Pb, Lu-Hf, Trace Element and Ree Analyses. Geostand. Newsl. 1995, 19, 1–23. [Google Scholar] [CrossRef]
- Sláma, J.; Košler, J.; Condon, D.J.; Crowley, J.L.; Gerdes, A.; Hanchar, J.M.; Horstwood, M.S.; Morris, G.A.; Nasdala, L.; Norberg, N.; et al. Plešovice zircon—A new natural reference material for U–Pb and Hf isotopic microanalysis. Chem. Geol. 2008, 249, 1–35. [Google Scholar] [CrossRef]
- Thomson, S.N.; Gehrels, G.E.; Ruiz, J.; Buchwaldt, R. Routine low-damage apatite U-Pb dating using laser ablation–multicollector–ICPMS. Geochem. Geophys. Geosystems 2012, 13. [Google Scholar] [CrossRef]
- Krestianinov, E.; Amelin, Y.; Neymark, L.A.; Aleinikoff, J.N. U-Pb systematics of uranium-rich apatite from Adirondacks: Inferences about regional geological and geochemical evolution, and evaluation of apatite reference materials for in situ dating. Chem. Geol. 2021, 581, 120417. [Google Scholar] [CrossRef]
- Schoene, B.; Bowring, S. U–Pb systematics of the McClure Mountain syenite: Thermochronological constraints on the age of the 40 Ar/39 Ar standard MMhb. Contrib. Mineral. Petrol. 2006, 151, 613–630. [Google Scholar] [CrossRef]
- McDowell, F.W.; McIntosh, W.C.; Farley, K.A. A precise 40Ar-39Ar reference age for the Durango apatite (U-Th)/He and fission-track dating standard. Chem. Geol. 2005, 214, 249–263. [Google Scholar] [CrossRef]
- Chew, D.M.; Petrus, J.A.; Kamber, B.S. U-Pb LA-ICPMS dating using accessory mineral standards with variable common Pb. Chem. Geol. 2014, 363, 185–199. [Google Scholar] [CrossRef]
- Paton, C.; Hellstrom, J.; Paul, B.; Woodhead, J.; Hergt, J. Iolite: Freeware for the visualisation and processing of mass spectrometric data. J. Anal. At. Spectrom. 2011, 26, 2508–2518. [Google Scholar] [CrossRef]
- Vermeesch, P. IsoplotR: A free and open toolbox for geochronology. Geosci. Front. 2018, 9, 1479–1493. [Google Scholar] [CrossRef]
- Horstwood, M.S.A.; Košler, J.; Gehrels, G.; Jackson, S.E.; McLean, N.M.; Paton, C.; Pearson, N.J.; Sircombe, K.; Sylvester, P.; Vermeesch, P.; et al. Community-Derived Standards for LA-ICP-MS U-(Th-)Pb Geochronology-Uncertainty Propagation, Age Interpretation and Data Reporting. Geostand. Geoanalytical Res. 2016, 40, 311–332. [Google Scholar] [CrossRef]
- Fonseca, A.; Nachtergaele, S.; Bonilla, A.; Dewaele, S.; De Grave, J. Extensional exhumation of cratons: Insights from the Early Cretaceous Rio Negro—Juruena belt (Amazonian Craton, Colombia). Solid Earth 2024, 15, 329–352. [Google Scholar] [CrossRef]
- ANH-SGC. Unificación de la Información Geológica en un Sistema Integral Basado en la Cartografía, Petro-Termocronología y Geología de Subsuelo en la Cuenca Caguán-Putumayo Fase I y II. 2022. Available online: https://geovisor.anh.gov.co/EstudiosANH/CV_216_2021%20ANH%20-%20003_2021%20SGC.zip (accessed on 24 April 2025).
- Buchely, F.; Gomez, L.; Buitrago, J.; Cristancho, A.; Moreno, M.; Hincapie, G.; Aranzazu, J.; Casteblanco, E.; Ceballos, L.; Quiñonez, C.; et al. Geología de la plancha 305—San Juan de Arama. Serv. Geológico Colomb. SGC, Mem. Explic. Escala 1100.000 0–120. 2015. Available online: http://recordcenter.sgc.gov.co/B15/23008010024813/documento/pdf/2105248131101000.pdf (accessed on 15 September 2025).
- Pisarevsky, S.A.; Murphy, J.B.; Cawood, P.A.; Collins, A.S. Late Neoproterozoic and Early Cambrian palaeogeography: Models and problems. In West Gondwana: Pre-Cenozoic Correlations Across the South Atlantic Region; Special Publications; Geological Society of London: London, UK, 2008; Volume 294, pp. 9–31. [Google Scholar]
- Meert, J.G.; Torsvik, T.H. The making and unmaking of a supercontinent: Rodinia revisited. Tectonophysics 2003, 375, 261–288. [Google Scholar] [CrossRef]
- Boris, R.; Domeier, M.; Jakob, J. On the origins of the Iapetus Ocean. Earth-Sci. Rev. 2021, 221, 103791. [Google Scholar] [CrossRef]
- Cawood, P.A.; Pisarevsky, S.A. Laurentia–Baltica–Amazonia relations during Rodinia assembly. Precambrian Res. 2017, 292, 386–397. [Google Scholar] [CrossRef]
- Spencer, C.J.; Cawood, P.A.; Hawkesworth, C.J.; Dhuime, B. Proterozoic supercontinent assembly and breakup. Earth-Sci. Rev. 2013, 120, 1–24. [Google Scholar]
- Cawood, P.A.; Pisarevsky, S.A.; Leitch, E.C. The core of Rodinia formed by the juxtaposition of opposed retreating and advancing accretionary orogens. Precambrian Res. 2020, 350, 105–118. [Google Scholar]
- Li, Z.; Bogdanova, S.; Collins, A.; Davidson, A.; De Waele, B.; Ernst, R.; Fitzsimons, I.; Fuck, R.; Gladkochub, D.; Jacobs, J.; et al. Assembly, configuration, and break-up history of Rodinia: A synthesis. Precambrian Res. 2008, 160, 179–210. [Google Scholar] [CrossRef]






| Sample | Lat. | Long. | Lithology | Mineralogy |
|---|---|---|---|---|
| GV-372-018 | 2.179 | −72.855 | felspathic gneiss | alkali feldspar, brown biotite, and amphibole |
| GV-372-019 | 2.186 | −72.872 | quartz-felspathic gneiss | alkali feldspar, quartz, hornblende, and biotite |
| GV-372-011 | 2.253 | −72.890 | quartz–feldspathic orthogneiss | orthoclase and quartz, with minor microcline, plagioclase, and chlorite |
| GV-372-012 | 2.253 | −72.890 | quartz–feldspathic orthogneiss | orthoclase and quartz, with minor microcline, plagioclase, and chlorite |
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Bonilla Pérez, A.; Cogné, N.; Zafra Mejía, C.A. Ediacaran Thermal Disturbance in the NW Amazonian Craton: Insights from Zircon and Apatite U–Pb Geochronology of the Guaviare Complex, Colombia. Geosciences 2026, 16, 154. https://doi.org/10.3390/geosciences16040154
Bonilla Pérez A, Cogné N, Zafra Mejía CA. Ediacaran Thermal Disturbance in the NW Amazonian Craton: Insights from Zircon and Apatite U–Pb Geochronology of the Guaviare Complex, Colombia. Geosciences. 2026; 16(4):154. https://doi.org/10.3390/geosciences16040154
Chicago/Turabian StyleBonilla Pérez, Amed, Nathan Cogné, and Carlos Alfonso Zafra Mejía. 2026. "Ediacaran Thermal Disturbance in the NW Amazonian Craton: Insights from Zircon and Apatite U–Pb Geochronology of the Guaviare Complex, Colombia" Geosciences 16, no. 4: 154. https://doi.org/10.3390/geosciences16040154
APA StyleBonilla Pérez, A., Cogné, N., & Zafra Mejía, C. A. (2026). Ediacaran Thermal Disturbance in the NW Amazonian Craton: Insights from Zircon and Apatite U–Pb Geochronology of the Guaviare Complex, Colombia. Geosciences, 16(4), 154. https://doi.org/10.3390/geosciences16040154

