Explaining Global Turkey Biometric Diversity Through Principal Component Analysis
Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Data Collection
2.2. Ethics Statement
2.3. Data Analysis
3. Results
3.1. Descriptive Statistics
3.2. Correlation Matrix Among Explanatory Variables
3.3. Principal Components Analysis and Model Generated
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Abbreviation | Genotype | Distribution | Measured Animals in Studies | References |
---|---|---|---|---|
COM | Commercial | Worldwide | 1183 toms and 1149 hens | [14,20,29,30,31,32,33] |
BRI | Brianzolo | Italy | 17 toms and 29 hens | [13] |
NDI | Nero d’Italia | Italy | 17 toms and 29 hens | [13] |
DAL | Dalmatian turkey | Croatia | 10 toms and 20 hens | [34] |
ZAG | Zagorje turkey | Croatia | 20 toms and 80 hens | [35] |
MAM | Mammoth Bronze | Worldwide | 41 toms and 41 hens | [19,36] |
NOR | Norfolk Black | Worldwide | 41 toms and 41 hens | [19,36] |
BAN | Local Bangladeshi | Bangladesh | 25 toms and 25 hens | [37] |
CAM | Local Cameroonian | Cameroon | 95 toms and 141 hens | [38] |
GHA | Local Ghanaian | Ghana | 195 toms and 105 hens | [22] |
GUA | Local Guatemalan | Guatemala | 181 toms and 210 hens | [21] |
KEN | Local Kenyan | Kenya | 9 toms and 9 hens | [39] |
MEX | Local Mexican | Mexico | 526 toms and 332 hens | [16,23,40,41] |
NIG | Local Nigerian | Nigerian | 382 toms and 475 hens | [18,20,30,42,43,44,45] |
TUN | Local Tunisian | Tunisia | 93 toms and 108 hens | [46] |
Abbreviation | Variable | Description |
---|---|---|
SkL | Skull length | Distance between the occiput to the tip of the beak |
SkW | Skull width | Lateral distance between both zygomatic arches |
BeL | Beak length | Distance from the base to the tip of the beak |
BeW | Beak width | The maximum lateral distance, at the base of the beak |
SnL | Snood length | Distance from the base to the tip of the snood |
W | Weight | Bird’s live weight |
WS | Wingspan | Distance between the tip of both extended wings |
BoL | Body length | Distance between the beak’s tip and end of the non-feathered tail |
NL | Neck length | Maximum distance between the occiput to the neck’s base |
BrC | Breast circumference | Maximum thoracic perimeter through the keel and wings |
KL | Keel length | Distance between both keel’s tips |
ThL | Thigh length | Distance from the joint of the femur to the base of the shank |
TaL | Tarsus length | Distance from the tibiotarsal joint to the beginning of the toe |
TaD | Tarsus depth | Cranio-caudal distance at the middle of the metatarsal bone |
TaW | Tarsus width | Lateral distance at the middle of the metatarsal bone |
MDL | Middle toe length | Distance from the 3rd phalanx to the tip of the toe |
SKULL | Skull ratio | Skull length/skull width |
TARS | Tarsus ratio | Tarsus depth/tarsus width |
STOCK | Stockiness | (Breast circumference/body length) × 100 |
MAS | Massiveness | (Weight/body length) × 100 |
LLEG | Long-leggedness | (Tarsus length/body length)100 |
BMI | Body mass index | Weight/(body length)2 |
SHAPE | Shape index | Tarsus length/3√(weight) |
Commercial | Cameroonian | Kenyan | Dalmatian | Nero D’Italia | Zagorje | Tunisian | Ghanaian | Brianzolo | Bangladeshi | Norfolk Black | Mammoth Bronze | Mexican | Nigerian | Guatemalan | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W (Kg) | 10.96 ± 3.92 | 7.93 sr | 7.20 sr | 7.18 sr | 6.76 sr | 6.53 ± 0.51 | 6.25 ± 0.12 | 6.04 ± 0.47 | 5.47 sr | 5.66 ± 0.15 | 5.62 ± 2.08 | 5.44 ± 2.46 | 5.36 ± 0.57 | 4.29 ± 1.70 | 3.69 sr |
WS (cm) | 80.27 | - | - | - | 60.38 sr | - | - | - | 58.45 sr | - | - | - | 69.80 sr | 72.78 ± 0.15 | - |
BoL (cm) | 65.48 ± 18.69 | 62.83 sr | - | - | 63.31 sr | 29.92 ± 0.91 | 34.58 ± 0.14 | 34.16 ± 0.92 | 62.91 sr | 33.34 ± 1.16 | 33.85 ± 0.67 | 33.61 ± 1.48 | 49.74 ± 14.13 | 50.38 ± 13.90 | 55.01 sr |
SkL (cm) | 9.60 sr | - | - | 11.35 sr | - | 11.98 ± 0.35 | - | 7.20 sr | - | - | - | - | - | 9.39 sr | 11.25 sr |
SkW (cm) | 3.62 sr | - | - | 4.35 sr | - | 4.23 ± 0.17 | - | - | - | - | - | - | - | - | 4.26 sr |
BeL (cm) | 6.33 sr | - | - | - | - | 3.64 ± 0.05 | 2.92 ± 0.01 | - | - | 5.48 ± 0.19 | - | - | 5.06 ± 0.15 | 5.19 ± 0.15 | - |
BeW (cm) | 2.90 sr | - | - | - | - | - | - | 2.86 ± 0.14 | - | - | - | - | - | - | - |
SnL (mm) | - | - | - | - | - | - | - | - | - | - | - | - | 8.30 sr | - | 7.38 sr |
NL (cm) | 25.00 sr | - | - | - | - | - | - | - | - | - | - | - | 27.55 ± 1.73 | 23.72 ± 2.54 | - |
BrC (cm) | 60.20 sr | 62.02 sr | - | - | 55.00 sr | - | - | - | 53.62 sr | - | 53.78 ± 8.79 | 52.14 ± 12.05 | 53.23 ± 7.93 | 47.35 ± 8.86 | - |
KL (cm) | 19.70 ± 2.12 | - | - | 16.65 sr | 17.66 sr | 16.27 ± 0.75 | 14.63 ± 0.43 | 14.38 | 15.50 sr | - | - | - | 16.29 sr | 16.52 ± 2.76 | - |
ThL (cm) | 23.47 ± 2.89 | - | - | 21.10 sr | - | 22.16 ± 0.99 | 22.15 ± 0.42 | 21.80 ± 0.86 | - | 16.69 ± 0.56 | 20.31 sr | 20.29 sr | 15.07 sr | 18.96 ± 4.50 | - |
TaL (cm) | 17.74 ± 4.32 | 14.57 sr | 16.9 sr4 | 15.77 sr | 12.08 sr | 15.70 ± 0.57 | 13.45 ± 0.03 | 13.40 ± 0.13 | 11.56 sr | 11.06 ± 0.39 | 14.8 ± 2.54 | 14.53 ± 2.17 | 14.14 ± 0.84 | 11.34 ± 2.25 | - |
TaD (mm) | 22.75 ± 3.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
TaW (cm) | 15.97 ± 4.19 | 25.40 sr | - | - | 10.32 sr | - | - | - | 10.98 sr | - | - | - | 15.35 ± 4.59 | - | - |
MDL (cm) | 9.95 sr | - | - | - | - | - | - | - | - | - | - | - | - | 8.02 sr | - |
BdL (cm) | - | 10.35 sr | - | - | - | - | - | - | - | - | - | - | 6.83 sr | - | - |
Commercial | Cameroonian | Kenyan | Dalmatian | Nero D’italia | Zagorje | Tunisian | Ghanaian | Brianzolo | Bangladeshi | Norfolk Black | Mamooth Bronze | Mexican | Nigerian | Guatemalan | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W (Kg) | 8.07 ± 2.75 | 4.89 sr | 3.39 sr | 4.26 sr | 3.02 sr | 3.85 ± 0.22 | 3.57 ± 0.11 | 3.69 ± 0.29 | 2.67 sr | 4.01 ± 0.26 | 3.45 ± 0.92 | 3.36 ± 0.48 | 3.26 ± 0.05 | 3.346 ± 1.41 | 2.52 sr |
WS (cm) | 73.65 sr | - | - | - | 49.71 sr | - | - | - | 49.85 sr | - | - | - | 58.40 sr | 63.45 ± 0.92 | - |
BoL (cm) | 59.15 ± 16.15 | 53.65 sr | - | - | 53.59 sr | 24.20 ± 0.78 | 28.66 ± 0.36 | 28.16 ± 0.74 | 51.40 sr | 30.62 ± 0.69 | 29.84 ± 0.22 | 30.00 ± 0.28 | 45.51 ± 14.26 | 44.01 ± 12.47 | 46.73 sr |
SkL (cm) | 11.60 sr | - | - | 9.62 sr | - | 10.01 ± 0.19 | - | 4.76 sr | - | - | - | - | - | 6.71 sr | 9.99 sr |
SkW (cm) | 4.30 sr | - | - | 3.68 sr | - | 3.51 ± 0.04 | - | - | - | - | - | - | - | - | 3.74 sr |
BeL (cm) | 5.55 sr | - | - | - | - | 3.30 ± 0.08 | 2.56 ± 0.11 | - | - | 4.36 ± 0.23 | - | - | 4.73 ± 0.34 | 4.79 ± 0.51 | - |
BeW (cm) | 2.34 sr | - | - | - | - | - | - | 2.50 ± 0.17 | - | - | - | - | - | - | - |
SnL (mm) | - | - | - | - | - | - | - | - | - | - | - | - | 3.20 sr | - | 1.95 sr |
NL (cm) | 22.92 sr | - | - | - | - | - | - | - | - | - | - | - | 23.67 ± 1.47 | 18.93 ± 1.91 | - |
BrC (cm) | 57.24 sr | 48.70 sr | - | - | 41.93 sr | - | - | - | 41.02 sr | - | 42.86 ± 1.61 | 42.24 ± 0.79 | 45.69 ± 11.56 | 41.51 ± 8.43 | - |
KL (cm) | 17.89 ± 3.38 | - | - | 11.95 sr | 12.50 sr | 12.46 ± 0.27 | 11.49 ± 0.22 | 10.50 sr | 12.00 sr | - | - | - | - | 13.03 ± 1.66 | - |
ThL (cm) | 21.07 ± 2.19 | - | - | 17.78 sr | - | 18.27 ± 0.49 | 17.79 ± 0.54 | 17.87 ± 0.51 | - | 13.41 ± 0.36 | 16.96 sr | 17.50 sr | 13.01 sr | 15.89 ± 3.66 | - |
TaL (cm) | 14.54 ± 3.34 | 11.66 sr | 13.50 sr | 12.13 sr | 9.63 sr | 12.60 ± 0.35 | 10.64 ± 0.35 | 10.55 ± 0.37 | 9.59 sr | 9.76 ± 0.22 | 12.16 ± 3.06 | 11.84 ± 2.61 | 11.71 ± 0.79 | 9.23 ± 1.99 | - |
TaD (mm) | 20.25 ± 3.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
TaW (cm) | 14.54 ± 4.09 | 25.20 sr | - | - | 6.70 sr | - | - | - | 7.58 sr | - | - | - | 9.00 sr | - | - |
MDL (cm) | 8.17 sr | - | - | - | - | - | - | - | - | - | - | - | - | 7.20 sr | - |
SKULL | TARS | STOCK | MASS | LLEG | BMI | SHAPE | ||
---|---|---|---|---|---|---|---|---|
COM | M | 2.65 sr | 1.43 ± 0.21 | 78.93 sr | 11.59 sr | 21.01 ± 13.76 | 0.101 ± 0.087 | 8.32 ± 1.95 |
F | 2.69 sr | 1.38 ± 0.16 | 83.59 sr | 11.91 sr | 21.06 ± 15.46 | 0.116 ± 0.100 | 7.44 ± 1.84 | |
CAM | M | - | - | 98.71 sr | 12.62 sr | 23.19 sr | 0.201 sr | 7.31 sr |
F | - | - | 90.77 sr | 9.11 sr | 21.73 sr | 0.170 sr | 6.87 sr | |
KEN | M | - | - | - | - | - | - | 8.77 sr |
F | - | - | - | - | - | - | 8.99 sr | |
DAL | M | 2.61 sr | - | - | - | - | - | 8.17 sr |
F | 2.61 sr | - | - | - | - | - | 7.48 sr | |
NDI | M | - | - | 86.87 sr | 10.68 sr | 19.08 sr | 0.168 sr | 6.39 sr |
F | - | - | 78.24 sr | 5.64 sr | 17.97 sr | 0.110 sr | 6.66 sr | |
ZAG | M | 2.83 ± 0.03 | - | - | 21.84 ± 1.57 | 52.49 ± 2.38 | 0.730 ± 0.056 | 8.40 ± 0.27 |
F | 2.85 ± 0.05 | - | - | 15.90 ± 0.61 | 52.07 ± 0.66 | 0.657 ± 0.026 | 8.04 ± 0.12 | |
TUN | M | - | - | - | 18.09 ± 0.36 | 38.91 ± 0.11 | 0.523 ± 0.011 | 7.30 ± 0.06 |
F | - | - | - | 12.46 ± 0.54 | 37.15 ± 1.57 | 0.435 ± 0.024 | 6.96 ± 0.19 | |
GHA | M | - | - | - | 17.67 ± 0.98 | 39.23 ± 0.72 | 0.517 ± 0.017 | 7.36 ± 0.14 |
F | - | - | - | 13.14 ± 1.38 | 37.47 ± 1.02 | 0.468 ± 0.062 | 6.83 ± 0.34 | |
BRI | M | - | - | 85.23 sr | 8.69 sr | 18.38 sr | 0.138 sr | 6.56 sr |
F | - | - | 79.81 sr | 5.19 sr | 18.66 sr | 0.100 sr | 6.91 sr | |
BAN | M | - | - | - | 17.00 ± 0.33 | 33.19 ± 1.63 | 0.510 ± 0.026 | 6.20 ± 0.25 |
F | - | - | - | 13.09 ± 0.61 | 31.91 ± 1.41 | 0.427 ± 0.014 | 6.15 ± 0.27 | |
NOR | M | - | - | 158.64 ± 22.81 | 16.56 ± 5.83 | 43.79 ± 8.38 | 0.487 ± 0.162 | 8.54 ± 2.52 |
F | - | - | 143.61 ± 4.31 | 11.56 ± 3.01 | 40.80 ± 10.57 | 0.387 ± 0.098 | 8.20 ± 2.77 | |
MAM | M | - | - | 154.49 ± 29.02 | 16.03 ± 6.61 | 43.43 ± 8.38 | 0.473 ± 0.176 | 8.56 ± 2.58 |
F | - | - | 140.81 ± 3.97 | 11.20 ± 1.71 | 39.44 ± 8.32 | 0.374 ± 0.060 | 7.96 ± 2.12 | |
MEX | M | - | - | 103.25 ± 18.16 | 11.15 ± 2.46 | 28.89 ± 6.39 | 0.242 ± 0.098 | 8.08 ± 0.41 |
F | - | - | 89.49 ± 23.04 | 7.50 ± 2.47 | 25.93 ± 6.91 | 0.182 ± 0.111 | 7.89 ± 0.53 | |
NIG | M | - | - | 93.60 ± 40.93 | 7.18 ± 1.66 | 24.74 ± 11.51 | 0.128 ± 0.097 | 6.81 ± 1.41 |
F | - | - | 90.39 ± 35.64 | 6.25 ± 1.39 | 22.92 ± 11.02 | 0.125 ± 0.093 | 6.01 ± 1.31 | |
GUA | M | 2.64 sr | - | - | 6.71 sr | - | 0.122 sr | - |
F | 2.67 sr | - | - | 5.39 sr | - | 0.12 sr | - |
PC1 | PC2 | PC3 | PC4 | PC5 | ||
MALES | SKULL | 0.498 | 0.168 | 0.250 | 0.058 | 0.026 |
TARS | 0.003 | 0.489 | 0.290 | 0.216 | 0.002 | |
STOCK | 0.471 | 0.064 | 0.388 | 0.055 | 0.021 | |
MAS | 0.721 | 0.211 | 0.001 | 0.048 | 0.013 | |
LLEG | 0.943 | 0.032 | 0.000 | 0.014 | 0.000 | |
BMI | 0.825 | 0.127 | 0.003 | 0.032 | 0.003 | |
SHAPE | 0.345 | 0.429 | 0.005 | 0.207 | 0.012 | |
PC1 | PC2 | PC3 | PC4 | PC5 | ||
FEMALES | SKULL | 0.458 | 0.002 | 0.464 | 0.003 | 0.067 |
TARS | 0.153 | 0.588 | 0.025 | 0.233 | 0.002 | |
STOCK | 0.062 | 0.329 | 0.548 | 0.004 | 0.053 | |
MAS | 0.781 | 0.027 | 0.127 | 0.036 | 0.012 | |
LLEG | 0.614 | 0.347 | 0.004 | 0.010 | 0.006 | |
BMI | 0.892 | 0.002 | 0.077 | 0.008 | 0.006 | |
SHAPE | 0.023 | 0.783 | 0.071 | 0.077 | 0.040 |
MALES | FEMALES | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
F1 (90.37%) | F2 (97.57%) | F3 (99.06%) | F4 (99.80%) | F5 (100%) | F1 (60.56%) | F2 (79.34%) | F3 (97.04%) | F4 (99.52%) | F3 (100%) | ||
HEAD | SkL | 0.747 | 0.245 | 0.006 | 0.002 | 0.000 | 0.782 | 0.052 | 0.109 | 0.054 | 0.003 |
SkW | 0.931 | 0.051 | 0.001 | 0.013 | 0.003 | 0.356 | 0.255 | 0.385 | 0.000 | 0.004 | |
BeL | 0.942 | 0.001 | 0.057 | 0.000 | 0.000 | 0.789 | 0.141 | 0.005 | 0.063 | 0.002 | |
BeW | 0.923 | 0.063 | 0.008 | 0.000 | 0.005 | 0.179 | 0.487 | 0.329 | 0.005 | 0.000 | |
SnL | 0.975 | 0.000 | 0.002 | 0.021 | 0.002 | 0.923 | 0.004 | 0.057 | 0.001 | 0.015 | |
F1 (41.80%) | F2 (67.41%) | F3 (85.60%) | F4 (94.45%) | F5 (98.36%) | F1 (38.05%) | F2 (64.86%) | F3 (81.57%) | F4 (92.52%) | F5 (96.84%) | ||
TORSO | W | 0.109 | 0.075 | 0.750 | 0.053 | 0.002 | 0.657 | 0.079 | 0.083 | 0.079 | 0.056 |
WS | 0.633 | 0.081 | 0.002 | 0.252 | 0.019 | 0.685 | 0.132 | 0.079 | 0.000 | 0.009 | |
BoL | 0.633 | 0.009 | 0.099 | 0.192 | 0.067 | 0.040 | 0.400 | 0.392 | 0.131 | 0.037 | |
NL | 0.337 | 0.520 | 0.042 | 0.001 | 0.090 | 0.554 | 0.038 | 0.280 | 0.024 | 0.091 | |
BrC | 0.465 | 0.327 | 0.143 | 0.022 | 0.000 | 0.088 | 0.701 | 0.090 | 0.028 | 0.068 | |
KL | 0.332 | 0.525 | 0.055 | 0.010 | 0.057 | 0.260 | 0.259 | 0.078 | 0.395 | 0.000 | |
F1 (37.87%) | F2 (64.68%) | F3 (85.13%) | F4 (93.99%) | F5 (100%) | F1 (57.95%) | F2 (85.65%) | F3 (95.63%) | F4 (99.54%) | F5 (100%) | ||
LEGS | ThL | 0.172 | 0.604 | 0.038 | 0.184 | 0.002 | 0.486 | 0.170 | 0.340 | 0.004 | 0.000 |
TaL | 0.734 | 0.050 | 0.059 | 0.006 | 0.152 | 0.710 | 0.093 | 0.121 | 0.074 | 0.001 | |
TaD | 0.592 | 0.179 | 0.073 | 0.035 | 0.121 | 0.568 | 0.396 | 0.000 | 0.027 | 0.009 | |
TaW | 0.382 | 0.036 | 0.435 | 0.133 | 0.014 | 0.554 | 0.427 | 0.001 | 0.008 | 0.011 | |
MDL | 0.013 | 0.471 | 0.418 | 0.086 | 0.012 | 0.580 | 0.299 | 0.037 | 0.082 | 0.002 |
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Salgado Pardo, J.I.; González Ariza, A.; Carranco Medina, L.; León Jurado, J.M.; Delgado Bermejo, J.V.; Marelli, S.P.; Cerolini, S.; Zaniboni, L.; Camacho Vallejo, M.E. Explaining Global Turkey Biometric Diversity Through Principal Component Analysis. Animals 2025, 15, 2537. https://doi.org/10.3390/ani15172537
Salgado Pardo JI, González Ariza A, Carranco Medina L, León Jurado JM, Delgado Bermejo JV, Marelli SP, Cerolini S, Zaniboni L, Camacho Vallejo ME. Explaining Global Turkey Biometric Diversity Through Principal Component Analysis. Animals. 2025; 15(17):2537. https://doi.org/10.3390/ani15172537
Chicago/Turabian StyleSalgado Pardo, José Ignacio, Antonio González Ariza, Laura Carranco Medina, José Manuel León Jurado, Juan Vicente Delgado Bermejo, Stefano Paolo Marelli, Silvia Cerolini, Luisa Zaniboni, and María Esperanza Camacho Vallejo. 2025. "Explaining Global Turkey Biometric Diversity Through Principal Component Analysis" Animals 15, no. 17: 2537. https://doi.org/10.3390/ani15172537
APA StyleSalgado Pardo, J. I., González Ariza, A., Carranco Medina, L., León Jurado, J. M., Delgado Bermejo, J. V., Marelli, S. P., Cerolini, S., Zaniboni, L., & Camacho Vallejo, M. E. (2025). Explaining Global Turkey Biometric Diversity Through Principal Component Analysis. Animals, 15(17), 2537. https://doi.org/10.3390/ani15172537