First Molecular Detection of Orthohantaviruses (Orthohantavirus hantanense and O. jejuense) in Trombiculid Mites from Wild Rodents in the Republic of Korea
Abstract
1. Introduction
2. Materials and Methods
2.1. Ethics Statement
2.2. Rodent Trapping and Trombiculid Mite Sampling
2.3. RNA Extraction and Polymerase Chain Reaction (PCR) Amplification
2.4. Molecular Identification of Rodents and Ticks
2.5. Sequencing and Phylogenetic Analysis
3. Results
3.1. Trombiculid Mite Collection and Orthohantavirus Minimum Infection Rate (MIR)
3.2. Orthohantavirus Detection in Host Rodents and Other Ectoparasites
3.3. Phylogenetic Analyses
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| HPS | hantavirus pulmonary syndrome |
| SFTS | severe fever with thrombocytopenia syndrome |
| qPCR | quantitative polymerase chain reaction |
| ROK | Republic of Korea |
| HFRS | hemorrhagic fever with renal syndrome |
| MIR | minimum infection rate |
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| Region | No. of Collected Rodents | No. of Collected Mites | No. of Tested Mites | No. of Tested Pools | No. of Positive Pools | MIR (%) |
|---|---|---|---|---|---|---|
| Cheorwon | 10 | 605 | 230 | 27 | 0 | 0 |
| Paju | 2 | 246 | 91 | 10 | 0 | 0 |
| Gangneung | 10 | 186 | 65 | 12 | 0 | 0 |
| Hwaseong | 2 | 242 | 119 | 13 | 0 | 0 |
| Yeoju | 6 | 718 | 115 | 14 | 0 | 0 |
| Yesan | 3 | 141 | 61 | 7 | 0 | 0 |
| Cheongju | 13 | 781 | 229 | 29 | 1 | 0.4 |
| Boryeong | 6 | 26 | 13 | 3 | 1 | 7.7 |
| Yeongdeok | 8 | 349 | 113 | 14 | 3 | 2.7 |
| Gimcheon | 5 | 366 | 147 | 16 | 1 | 0.7 |
| Jinan | 8 | 126 | 40 | 6 | 0 | 0 |
| Jeongeup | 5 | 281 | 94 | 11 | 1 | 1.1 |
| Hapcheon | 6 | 291 | 125 | 14 | 0 | 0 |
| Gwangju | 5 | 120 | 23 | 4 | 0 | 0 |
| Boseong | 5 | 61 | 9 | 2 | 0 | 0 |
| Geoje | 5 | 374 | 169 | 18 | 0 | 0 |
| Seogwipo | 29 | 50 | 17 | 4 | 0 | 0 |
| Total | 128 | 4963 | 1660 | 204 | 7 | 0.4 |
| Species | No. of Collected Rodents | No. of Rodents with HP Mite Pools | No. of HP Rodents with HP Mite Pools | No. of Ectoparasites from Rodents with HP Mite Pools | ||||
|---|---|---|---|---|---|---|---|---|
| Ixodes nipponensis | Mesostigmata spp. | Pulicidae spp. | Anoplura spp. | Total | ||||
| Apodemus agrarius | 118 | 6 | 4 | 5 | 1 | 1 | 1 | 8 |
| Craseomys regulus | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| Crocidura spp. | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
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Kim, S.Y.; Lee, H.S.; Yoon, H.; Lee, H.I. First Molecular Detection of Orthohantaviruses (Orthohantavirus hantanense and O. jejuense) in Trombiculid Mites from Wild Rodents in the Republic of Korea. Pathogens 2025, 14, 1260. https://doi.org/10.3390/pathogens14121260
Kim SY, Lee HS, Yoon H, Lee HI. First Molecular Detection of Orthohantaviruses (Orthohantavirus hantanense and O. jejuense) in Trombiculid Mites from Wild Rodents in the Republic of Korea. Pathogens. 2025; 14(12):1260. https://doi.org/10.3390/pathogens14121260
Chicago/Turabian StyleKim, Seong Yoon, Hak Seon Lee, Hyunyoung Yoon, and Hee Il Lee. 2025. "First Molecular Detection of Orthohantaviruses (Orthohantavirus hantanense and O. jejuense) in Trombiculid Mites from Wild Rodents in the Republic of Korea" Pathogens 14, no. 12: 1260. https://doi.org/10.3390/pathogens14121260
APA StyleKim, S. Y., Lee, H. S., Yoon, H., & Lee, H. I. (2025). First Molecular Detection of Orthohantaviruses (Orthohantavirus hantanense and O. jejuense) in Trombiculid Mites from Wild Rodents in the Republic of Korea. Pathogens, 14(12), 1260. https://doi.org/10.3390/pathogens14121260

