Molecular and Morphological Characteristics of a Novel Cyst Nematode in the Rhizosphere of Artemisia lavandulaefolia DC. in Gansu Province, Northwest China
Abstract
:1. Introduction
2. Materials and Methods
2.1. Separation and Collection of Cysts
2.2. Morphological Identification of Cyst Nematodes
2.3. DNA Extraction from Cyst Nematodes
2.4. PCR of ITS-rDNA and D2-D3 Region of 28S-rDNA Sequences in Cyst Nematodes
2.5. Cloning and Sequencing of PCR Products
2.6. Sequence Phylogenetic Analysis of PCR Products
3. Results
3.1. Morphology of Rhizosphere Cyst Nematode of Artemisia lavandulaefolia DC.
3.2. Morphological Identification of Cyst Population
3.3. Molecular Phylogenetic Analysis of Cyst Population
4. Discussion
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Reaction Material | Concentration | Volume (µL) |
---|---|---|
Template DNA | - | 2 |
Upstream primer | 10 μmol/L | 1 |
Downstream primer | 10 μmol/L | 1 |
PCR Taq Mix | - | 12.5 |
ddH2O | - | 8.5 |
Total volume | - | 25 |
No. of Cycles | Temperature/°C | Time | Step |
---|---|---|---|
1 | 95 | 4 min | Pre-denaturation |
34 | 95 | 30 s | Denaturation |
56 | 30 s | Annealing | |
72 | 1 min | Extension | |
1 | 72 | 10 min | Extension |
Morphological Characters | Longnan Population | Liaoning Population [28] |
---|---|---|
Cyst number | 40 | 20 |
Cyst length | 553.10 ± 15.20 (355.71–738.58) | 423.4–585.4 |
Cyst width | 411.05 ± 13.42 (277.89–609.15) | 283.0–398.1 |
L/W | 1.36 ± 0.02 (1.11–1.65) | - |
Fenestral length | 25.39 ± 0.56 (18.75–37.55) | 19.9–26.3 |
Fenestral width | 22.46 ± 0.51 (15.58–30.04) | - |
J2 number | 40 | 20 |
Body length | 485.24 ± 4.55 (397.64–559.73) | 423.4–585.4 |
Body width at mid-body | 22.29 ± 0.20 (20.33–24.95) | 283.0–398.1 |
a | 21.84 ± 0.29 (18.67–26.40) | 18.0–24.7 |
c | 12.83 ± 0.30 (10.26–17.49) | 9.8–12.6 |
c′ | 3.34 ± 0.08 (2.04–4.37) | 2.7–4.0 |
Lip region height | 4.44 ± 0.12 (3.14–6.12) | - |
Lip region diam | 9.06 ± 0.10 (6.96–10.24) | - |
St | 23.29 ± 0.21 (19.35–25.90) | 21.9–25.9 |
MB | 79.84 ± 0.81 (67.95–94.13) | - |
DGO | 3.82 ± 0.06 (3.00–4.31) | - |
EP | 108.60 ± 0.95 (95.68–124.88) | 103.9–121.3 |
MBW | 10.68 ± 0.17 (8.41–13.33) | - |
ABW | 11.66 ± 0.26 (8.50–13.96) | - |
Tail | 38.47 ± 0.80 (27.69–47.62) | 39.1–50.6 |
Hyaline portion tail | 18.59 ± 0.33 (14.87–24.22) | 14.87–24.22 |
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Guo, W.; Li, H.; Wei, X.; Luo, N.; Shi, M. Molecular and Morphological Characteristics of a Novel Cyst Nematode in the Rhizosphere of Artemisia lavandulaefolia DC. in Gansu Province, Northwest China. Pathogens 2024, 13, 881. https://doi.org/10.3390/pathogens13100881
Guo W, Li H, Wei X, Luo N, Shi M. Molecular and Morphological Characteristics of a Novel Cyst Nematode in the Rhizosphere of Artemisia lavandulaefolia DC. in Gansu Province, Northwest China. Pathogens. 2024; 13(10):881. https://doi.org/10.3390/pathogens13100881
Chicago/Turabian StyleGuo, Wei, Huixia Li, Xuejuan Wei, Ning Luo, and Mingming Shi. 2024. "Molecular and Morphological Characteristics of a Novel Cyst Nematode in the Rhizosphere of Artemisia lavandulaefolia DC. in Gansu Province, Northwest China" Pathogens 13, no. 10: 881. https://doi.org/10.3390/pathogens13100881
APA StyleGuo, W., Li, H., Wei, X., Luo, N., & Shi, M. (2024). Molecular and Morphological Characteristics of a Novel Cyst Nematode in the Rhizosphere of Artemisia lavandulaefolia DC. in Gansu Province, Northwest China. Pathogens, 13(10), 881. https://doi.org/10.3390/pathogens13100881