Interaction of Polygenetic Variants for Gestational Diabetes Mellitus Risk with Breastfeeding and Korean Balanced Diet to Influence Type 2 Diabetes Risk in Later Life in a Large Hospital-Based Cohort
Abstract
:1. Introduction
2. Methods
2.1. Participants
2.2. Definition of GDM and T2DM
2.3. General Characteristics and Anthropometric and Biochemical Measurements
2.4. Food Intakes Using a Semi-Quantitative Food Frequency Questionnaire (SQFFQ) and Dietary Pattern Analysis
2.5. Genotyping DNA and Its Quality Control
2.6. Best Models for Genetic Variant-Genetic Variant Interactions by Generalized Multifactor Dimensionality Reduction (GMDR)
2.7. Statistical Analyses
3. Results
3.1. Daily Nutrient Intake
3.2. Genetic Variants Associated with the GDM Risk and Its Best Model of Gene-Gene Interactions
3.3. Association of the PRS with the 5-SNP Model with GDM and T2DM Risk
3.4. Interaction between PRS, GDM, and Dietary Patterns for T2DM Risk
4. Discussion
Supplementary Materials
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Parameters | Control 1 (n = 33,956) | GDM 2 (n = 384) | ORs and 95% CI for GDM 3 |
---|---|---|---|
Age (<55 years) 4 | 53.0 ± 0.05 | 49.2 ± 0.45 *** | 0.434 (0.310–0.607) |
Education (Number, %) | |||
<high school | 6773 (20.2) | 44 (11.5) *** | 1 |
High school | 7678 (22.9) | 55 (14.4) | 0.915 (0.546–1.534) |
≥College more | 19,078 (56.9) | 284 (74.1) | 1.446 (1.017–2.381) |
Income (Number, %) | |||
Low (<$2000) | 3688 (11.0) | 19 (5.1) *** | 1 |
Medium ($2000–4000) | 14,686 (43.8) | 153 (40.0) | 1.103 (0.675–1.803) |
High (>$4000) | 15,189 (45.3) | 211 (54.9) | 0.968 (0.586–1.600) |
Age at first pregnancy (<25 years) | 25.2 ± 0.02 | 26.4 ± 0.21 *** | 1.170 (1.068 1.282) |
BMI at age 20 (<25 kg/m2) | 20.3 ± 0.08 | 22.2 ± 0.70 *** | 7.600 (1.938–29.80) |
Large baby (number, %) | 326 (0.97) | 55 (14.3) *** | 2.085 (1.393–3.120) |
Age born LGA (<29 years) | 27.8 ± 0.11 | 29.1 ± 0.63 * | 1.451 (0.544–3.868) |
Children number (≤1) | 161 (1.47) | 223 (0.86) | 0.830 (0.667–1.033) |
Menarche age (<15 years) | 15.0 ± 0.05 | 15.2 ± 0.47 | 0.838 (0.612–1.147) |
Breast feeding (yes %) | 31,088 (86.4) | 301 (78.8) *** | |
<1 year | 25,218 (69.1) | 212 (55.2) *** | 0.920 (0.821–1.031) 5 |
≥1 year | 16,292 (44.6) | 104 (27.1) *** | 0.887 (0.806–0.976) 5 |
Metabolic syndrome (n, %) | 322 (1.01) | 62 (1.22) | 1.764 (1.279–2.434) |
BMI (<25 kg/m2) | 23.5 ± 0.02 | 23.5 ± 0.19 | 1.193 (0.879–1.620) |
Waist circumference (cm) 6 | 78.2 ± 0.03 | 78.7 ± 0.25 | 1.345 (0.933–1.939) |
Fasting serum glucose (<126 mg/dL) | 90.9 ± 0.07 | 101 ± 0.66 *** | 8.420 (6.452–10.99) |
HbA1C (<6.5%) | 5.59 ± 0.00 | 5.97 ± 0.03 *** | 9.229 (6.368–13.38) |
Type 2 diabetes (n, %) | 2550 (7.6) | 88 (22.9) *** | 4.746 (3.314–6.796) |
Serum total cholesterol (<230 mg/dL) | 201 ± 0.20 | 199 ± 1.83 | 1.152 (0.886–1.498) |
Serum LDL (<130 mg/dL) | 119.2 ± 1.52 | 118.0 ± 11.2 | 1.076 (0.794–1.458) |
Serum HDL (mg/dL) 7 | 56.4 ± 0.07 | 56.0 ± 0.67 | 1.083 (0.864–1.358) |
Serum TG (<150 mg/dL) | 112 ± 0.39 | 117 ± 3.68 | 1.163 (0.893–1.515) |
SBP (<130 mmHg) | 121 ± 0.08 | 121 ± 0.73 | 1.167 (0.913–1.491) |
DBP (<90 mmHg) | 74.3 ± 0.05 | 73.9 ± 0.44 | 1.221 (0.907–1.644) |
Nutrients | Control 1 | GDM 2 | ||
---|---|---|---|---|
No T2DM (n = 33,956) | T2DM (n = 2550) | No T2DM (n = 296) | T2DM (n = 88) | |
Energy (EER %) | 99.0 3 ± 0.03 a | 98.5 ± 0.11 b | 98.3 ± 0.31 b | 98.1 ± 0.59 b# |
Carbohydrate (energy %) | 72.0 ± 0.04 ab | 72.1 ± 0.14 ab | 71.2 ± 0.40 b | 72.9 ± 0.76 a |
Dietary fiber (g) | 5.7 ± 0.01 | 5.6 ± 0.05 | 5.4 ± 0.13 | 5.8 ± 0.24 |
Fat (energy %) | 13.7 ± 0.03 ab | 13.4 ± 0.11 b | 14.3 ± 0.3 a | 12.9 ± 0.57 b## |
Protein (energy %) | 13.4 ± 0.01 | 13.4 ± 0.05 | 13.5 ± 0.15 | 13.4 ± 0.29 |
Sodium (mg/day) | 2337 ± 6.31 | 2344 ± 23.5 | 2232 ± 65.9 | 2449 ± 126 |
Vitamin C (mg/day) | 110 ± 0.32 a | 105 ± 1.22 b | 99.7 ± 3.42 b | 108.5 ± 6.54 ab+ |
KBD (≥70th percentiles) | 10,460 (29.7) | 295 (22.7) *** | 116 (34.0) | 18 (41.9) |
WSD (≥70th percentiles) | 10,394 (29.5) | 343 (26.3) * | 135 (45.6) | 28 (31.8) * |
RMD (≥70th percentiles) | 10,459 (29.7) | 316 (24.3) *** | 106 (31.1) | 10 (23.3) |
Smoking (current + past) | 987 (2.91) | 103 (3.97) *** | 10 (3.39) | 5 (5.69) |
Drinking (g/day) | 39.1 ± 1.27 a | 29.7 ± 3.83 b | 33.7 ± 10.7 b | 38.6 ± 20.5 a+ |
Regular exercise (n, %) | 17,722 (52.2) | 1369 (53.7) | 156 (52.7) | 53 (60.2) |
Chr 1 | SNP 2 | Position | Mi 3 | Ma 4 | OR and 95% CI 5 | p-Value Adjusted 6 | MAF 7 | p-Value for HWE 8 | Gene | Functional Consequence |
---|---|---|---|---|---|---|---|---|---|---|
4 | rs6821589 | 89192792 | G | A | 2.86 (1.80–4.54) | 7.84 × 10−7 | 0.011 | 0.547 | PPM1K | intron |
4 | rs189428800 | 123779401 | A | G | 2.24 (1.45–3.45) | 2.74 × 10−5 | 0.015 | 0.774 | FGF2 | intron |
6 | rs7754840 | 20661250 | C | G | 1.16 (1.00–1.35) | 4.46 × 10−5 | 0.476 | 0.427 | CDKAL1 | intron |
7 | rs181540079 | 17370229 | C | T | 2.13 (1.37–3.31) | 8.47 × 10−5 | 0.015 | 0.498 | AHR | intron |
7 | rs11975504 | 151481965 | C | T | 1.73 (1.31–2.28) | 1.04 × 10−5 | 0.051 | 0.553 | PRKAG2 | intron |
9 | rs916855529 | 8721355 | G | A | 0.73 (0.62–0.86) | 1.28 × 10−5 | 0.397 | 0.160 | PTPRD | intron |
10 | rs2274034 | 6019248 | C | T | 0.72 (0.08–0.62) | 3.32 × 10−6 | 0.419 | 0.061 | IL15RA | 3′ UTR |
12 | rs148031082 | 80309656 | A | G | 2.48 (1.61–3.82) | 3.86 × 10−6 | 0.014 | 0.129 | PPP1R12A | intron |
13 | rs9589710 | 93967361 | T | C | 0.73 (0.62–0.86) | 1.81 × 10−5 | 0.364 | 0.782 | GPC6 | intron |
18 | rs80164908 | 7862077 | G | A | 1.42 (1.18–1.71) | 1.87 × 10−5 | 0.158 | 0.901 | PTPRM | intron |
Model | Adjusted Age at First Pregnancy, and Weight at 20 | Adjusted Age at First Pregnancy, Weight at 20, Residence Area, Childbirth Experience, Education | ||||||
---|---|---|---|---|---|---|---|---|
TRBA | TEBA | p Value | CVC | TRBA | TEBA | p Value | CVC | |
PTPRD_rs916855529 | 0.536 | 0.501 | 4 (0.828) | 7/10 | 0.532 | 0.514 | 6 (0.377) | 7/10 |
GPC6_ rs9589710 plus model 1 | 0.558 | 0.529 | 9 (0.010) | 5/10 | 0.549 | 0.527 | 8 (0.055) | 7/10 |
CDKAL1_rs7754840 plus model 2 | 0.581 | 0.550 | 8 (0.055) | 8/10 | 0.568 | 0.536 | 8 (0.055) | 7/10 |
PRKAG2_ rs11975504 plus model 3 | 0.601 | 0.543 | 9 (0.011) | 5/10 | 0.587 | 0.547 | 9 (0.011) | 9/10 |
PTPRM_rs80164908 plus model 4 | 0.624 | 0.555 | 10 (0.001) | 10/10 | 0.608 | 0.547 | 9 (0.011) | 10/10 |
IL15RA_rs2274034 plus model 5 | 0.644 | 0.548 | 10 (0.001) | 9/10 | 0.626 | 0.546 | 10 (0.001) | 9/10 |
AHR_rs181540079 plus model 6 | 0.663 | 0.557 | 10 (0.001) | 10/10 | 0.643 | 0.549 | 10 (0.001) | 10/10 |
PPM1K_ rs6821589 plus model 7 | 0.677 | 0.563 | 10 (0.001) | 10/10 | 0.655 | 0.557 | 10 (0.001) | 10/10 |
PPP1R12A_rs148031082 plus model 8 | 0.689 | 0.555 | 10 (0.001) | 9/10 | 0.666 | 0.544 | 10 (0.001) | 9/10 |
FGF2_rs189428800 plus model 9 | 0.699 | 0.553 | 10 (0.001) | 10/10 | 0.674 | 0.544 | 10 (0.001) | 10/10 |
Low-PRS | Medium-PRS | High-PRS | Interaction | |
---|---|---|---|---|
Non-GDM | 1 | 1.009 (0.805–1.264) | 1.362 (1.002–1.857) | 0.0004 for FSB |
GDM | 1 | 1.429 (0.777–2.629) | 1.115 (0.502–2.477) | |
Non-GDM | 1 | 1.005 (0.801–1.259) | 1.358 (1.003–1.851) | 0.023 for HbA1c |
GDM | 1 | 1.252 (0.545–2.874) | 1.543 (0.567–4.203) | |
Short period for BF (<1 year) | 1 | 1.226 (0.925–1.625) | 1.570 (1.049–2.349) | 0.216 |
Long period for BF (≥1 year) | 1 | 1.046 (0.776–1.411) | 1.526 (0.991–2.351) | |
Low intake of KBD (<70th percentile) | 1 | 0.998 (0.705–1.412) | 1.526 (0.934–2.494) | 0.030 |
High intake of KBD (≥70th percentile) | 1 | 1.117 (0.907–1.375) | 1.503 (1.113–2.030) | |
Low intake of WSD (<70th percentile) | 1 | 1.129 (0.920–1.387) | 1.623 (1.214–2.169) | 0.193 |
High intake of WSD (≥70th percentile) | 1 | 1.373 (0.950–1.986) | 2.046 (1.240–3.377) | |
Low intake of RMD (<70th percentile) | 1 | 1.138 (0.927–1.398) | 1.523 (1.128–2.055) | 0.234 |
High intake of RMD (≥70th percentile) | 1 | 1.537 (1.092–2.163) | 2.048 (1.273–3.292) |
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Park, S. Interaction of Polygenetic Variants for Gestational Diabetes Mellitus Risk with Breastfeeding and Korean Balanced Diet to Influence Type 2 Diabetes Risk in Later Life in a Large Hospital-Based Cohort. J. Pers. Med. 2021, 11, 1175. https://doi.org/10.3390/jpm11111175
Park S. Interaction of Polygenetic Variants for Gestational Diabetes Mellitus Risk with Breastfeeding and Korean Balanced Diet to Influence Type 2 Diabetes Risk in Later Life in a Large Hospital-Based Cohort. Journal of Personalized Medicine. 2021; 11(11):1175. https://doi.org/10.3390/jpm11111175
Chicago/Turabian StylePark, Sunmin. 2021. "Interaction of Polygenetic Variants for Gestational Diabetes Mellitus Risk with Breastfeeding and Korean Balanced Diet to Influence Type 2 Diabetes Risk in Later Life in a Large Hospital-Based Cohort" Journal of Personalized Medicine 11, no. 11: 1175. https://doi.org/10.3390/jpm11111175