Clinical and Genetic Characterization of Noonan Syndrome in a Romanian Cohort from Transylvania: Details on PTPN11 c.922A>G Variant and Phenotypic Spectrum
Abstract
1. Introduction

2. Materials and Methods
2.1. Patients
- A typical facial appearance together with at least one additional major criterion or two minor criteria, or
- Suggestive facial dysmorphology plus two major or three minor signs.
2.2. DNA Extraction and PCR-RFLP Analyses
3. Results
3.1. Clinical Characteristics
3.2. Genetic Results
3.3. Details for Case No. 1 Positive for PTPN11 c.922A>G
3.4. Details for Case No. 2 Positive for PTPN11 c.922A>G
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| AD | Autosomal dominant |
| AR | Autosomal recessive |
| ASD | Autism spectrum disorder |
| CGH | Comparative genomic hybridization |
| CMA/AVM | Capillary malformation/arteriovenous malformation |
| ECG | Electrocardiogram |
| HCM | Hypertrophic cardiomyopathy |
| HT | Hypertension |
| MIM/ OMIM | Mendelian Inheritance in Man/ Online Mendelian Inheritance in Man |
| MLPA | Multiplex Ligation-dependent Probe Amplification |
| NGS | Next-generation sequencing |
| NS | Noonan syndrome |
| PCR-RFLP | Polymerase Chain Reaction–Restriction Fragment Length Polymorphism |
| PTPN11 | Protein Tyrosine Phosphatase, Non-Receptor Type 11 |
| PVS | Pulmonary valve stenosis |
| RAS/MAPK | Rat Sarcoma/Mitogen-Activated Protein Kinase |
| SDS | Standard Deviation Score |
| WBS | Williams–Beuren syndrome |
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| Key Clinical Features in the Study Cohort | Number of Patients, n (%) |
|---|---|
| Height below third percentile | 24 (77.41%) |
| Height between percentile 3 and 10 | 1 (3.22%) |
| Heart conditions | 26 (83.87%) |
| Craniofacial dysmorphism | 23 (74.19%) |
| Triangular face | 5 (16.66%) |
| Hypertelorism | 10 (33.33%) |
| Palpebral ptosis | 2 (6.63%) |
| Downslanting palpebral fissures | 14 (46.66%) |
| Low set ears | 13 (43.33%) |
| Pterygium colli | 3 (9.67%) |
| Thoracic abnormalities | 6 (19.35%) |
| Broad thorax | 1 (3.33%) |
| Pectus carinatum | 2 (6.45%) |
| Pectus excavatum | 3 (9.67%) |
| Wide-spaced nipples | 5 (16.13%) |
| Kyphoscoliosis | 5 (16.13%) |
| Intellectual disability | 5 (16.13%) |
| Cryptorchidism in males | 11 (50%) |
| Congenital Heart Defect | Number of Patients, n (%) |
|---|---|
| PVS | 16 (51.61%) |
| PVS and HCM * | 3 (9.68%) |
| Pulmonary valve dysplasia | 1 (3.23%) |
| Left HCM | 1 (3.23%) |
| Atrial sept defect operated | 1 (3.23%) |
| Atrial septal aneurysm with left–right shunt | 1 (3.23%) |
| Small muscular sept defect | 1 (3.23%) |
| Patent foramen ovale | 2 (6.45%) |
| No heart condition | 5 (16.13%) |
| Features | Noonan Syndrome NF1 | Williams–Beuren Syndrome | Neurofibromatosis Type 1 Microdeletion Syndrome | References |
|---|---|---|---|---|
| Genetic Causes | Variants in BRAF, KRAS, MAP2K1, MRAS, NRAS, PTPN11, RAF1, RASA2, RIT1, RRAS2, SOS1, SOS2, LZTR1 (RAS/MAPK pathway); several additional genes, each linked to an NS-like phenotype, were identified in fewer than ten individuals | Hemizygous deletion of 1.5 to 1.8 Mb, approx. 28 genes from 7q11.23; is a contiguous gene deletion syndrome | Deletion of 17q11.2 (including NF1 gene) | [3,17,22,23,24] |
| Alternative name |
|
|
| [24] |
| Gene/Locus MIM number | *176876 | *130160 | *613113 | [24] |
| Phenotype MIM number | #163950 | #194050 | #601321 | [24] |
| Inheritance pattern | Mostly de novo or AD variants; AR forms of NS include NS2, caused by variants in the LZTR1 gene, and NS14, caused by variants in the SPRED2 gene | Mostly de novo, AD | Mostly de novo but can be inherited AD | [6,25] |
| Facial features | Triangular face, hypertelorism, ptosis, low-set ears: similar facial phenotypes to WBS modulated by ethnic background | “Elfin-like” face, broad forehead, full cheeks, wide mouth | Coarse facial features, hypertelorism, down-slanting palpebral fissures | [22,23,26,27] |
| Growth and stature | Short stature, postnatal growth retardation | Short stature, failure to thrive in infancy | Short stature, variable growth delay | [21,27] |
| Cardiac defects | In up to 90% of patients, PVS, HCM | Supravalvular aortic stenosis, pulmonary artery stenosis | Pulmonic stenosis, other congenital heart defects | [3,28] |
| Cognitive and developmental delay | Mild-to-moderate intellectual disability, learning difficulties | Intellectual disability, friendly/social personality | Developmental delay, speech delay, learning disabilities | [3,21,29] |
| Skeletal abnormalities | Pectus excavatum, pectus carinatum, scoliosis | Joint laxity, skeletal abnormalities | Pectus abnormalities, scoliosis | [3,21] |
| Skin manifestations | Generally normal | Soft skin, premature aging of the skin | Café-au-lait spots, axillary/inguinal freckling, multiple neurofibromas | [3] |
| Behavioral features | Varied; some social difficulties, verbal communication challenges | Overly friendly, anxiety, attention deficits, fear of loud noises | Attention deficits, possible ASD-like traits | [3,10] |
| Renal and urinary abnormalities | Sometimes present, cryptorchidism in males | Common, including renal artery stenosis | Genitourinary abnormalities, cryptorchidism in males; increased risk of HT | [3] |
| Cancer risk | Slightly increased risk of certain malignancies (e.g., leukemia, neuroblastoma) | No significant cancer predisposition | Increased risk of malignancies (due to NF1 gene deletion); e.g., plexiform neurofibromas, optic gliomas, malignant peripheral nerve sheath tumors | [3,10] |
| Sensory conditions vision issues, hearing changes | Strabismus, refractive errors, sensorineural hearing loss | Hyperacusis (sensitivity to sound), strabismus | Optic pathway gliomas, Lisch nodules (iris hamartomas), vision impairment | [3] |
| Distinctive features | Wide-spaced nipples, short/webbed neck, coagulation abnormalities | Outgoing personality, musical affinity, strong verbal skills | Café-au-lait macules, neurofibromas, and an increased risk of tumors | [3,10] |
| Diagnostic clues | Cardiac defects + short stature + facial dysmorphism | Supravalvular aortic stenosis + hypersociability + “elfin-like” face | Café-au-lait spots + neurofibromas | [3,26] |
| Prevalence | 1–5/10,000 | approx. 1/7500 | Not known; about 5% of NF1 cases are reported to have deletions of the entire NF1 gene | [30] |
| Study [Reference] | Total Number of Patients | Number of PTPN11 Variants | Percentage of PTPN11 Variants | Number of PTPN11 C.922A>G Variants | Percentage of PTPN11 C.922A>G Variants |
|---|---|---|---|---|---|
| Orlova et al., 2024 [12] | 456 | 107 | 23.46 | 23 | 5.04 |
| Sznajer et al., 2007 [33] | 272 | 104 | 38.24 | 19 | 18.2 |
| Tartaglia et al., 2002 [16] | 112 | 54 | 48.21 | 17 | 15.18 |
| Brasil et al., 2010 [34] | 95 | 42 | 44.21 | 11 | 11.58 |
| Zepeda-Olmos et al., 2024 [35] | 91 | 43 | 47.25 | 7 | 7.69 |
| Bertola et al., 2006 [32] | 50 | 21 | 42.00 | 0 | 0.00 |
| Yoshida et al., 2004 [36] | 45 | 18 | 40.00 | 2 | 4.44 |
| Ferreira et al., 2007 [37] | 33 | 16 | 48.48 | 5 | 15.15 |
| Kosaki et al., 2002 [38] | 21 | 7 | 33.33 | 1 | 4.76 |
| Athota et al., 2020 [21] | 363 | 107 | 29.47 | 12 | 3.30 |
| Ouboukss et al., 2024 [39] | 61 | 17 | 41.4% | 10 | 16.39 |
| Our study | 31 | Not known | Not known | 2 | 6.45 |
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Nazarie, F.V.; Miclea, D.; Șufană, C.; Botezatu, A.; Popp, R.A.; Pascanu, I.M.; Alkhzouz, C.; Bucerzan, S.; Lazăr, C.; Lazea, C.; et al. Clinical and Genetic Characterization of Noonan Syndrome in a Romanian Cohort from Transylvania: Details on PTPN11 c.922A>G Variant and Phenotypic Spectrum. Diagnostics 2025, 15, 2753. https://doi.org/10.3390/diagnostics15212753
Nazarie FV, Miclea D, Șufană C, Botezatu A, Popp RA, Pascanu IM, Alkhzouz C, Bucerzan S, Lazăr C, Lazea C, et al. Clinical and Genetic Characterization of Noonan Syndrome in a Romanian Cohort from Transylvania: Details on PTPN11 c.922A>G Variant and Phenotypic Spectrum. Diagnostics. 2025; 15(21):2753. https://doi.org/10.3390/diagnostics15212753
Chicago/Turabian StyleNazarie, Florina Victoria, Diana Miclea, Crina Șufană, Alina Botezatu, Radu Anghel Popp, Ionela Maria Pascanu, Camelia Alkhzouz, Simona Bucerzan, Călin Lazăr, Cecilia Lazea, and et al. 2025. "Clinical and Genetic Characterization of Noonan Syndrome in a Romanian Cohort from Transylvania: Details on PTPN11 c.922A>G Variant and Phenotypic Spectrum" Diagnostics 15, no. 21: 2753. https://doi.org/10.3390/diagnostics15212753
APA StyleNazarie, F. V., Miclea, D., Șufană, C., Botezatu, A., Popp, R. A., Pascanu, I. M., Alkhzouz, C., Bucerzan, S., Lazăr, C., Lazea, C., & Vulturar, R. (2025). Clinical and Genetic Characterization of Noonan Syndrome in a Romanian Cohort from Transylvania: Details on PTPN11 c.922A>G Variant and Phenotypic Spectrum. Diagnostics, 15(21), 2753. https://doi.org/10.3390/diagnostics15212753

