Automated 3D Segmentation of the Aorta and Pulmonary Artery on Non-Contrast-Enhanced Chest Computed Tomography Images in Lung Cancer Patients
Abstract
:1. Introduction
2. Materials and Methods
2.1. Data Information
2.2. CT Image Acquisition
2.3. Pre-Processing of CT Images
2.4. Architecture
2.5. 3D U-Net
2.6. Contrast Enhancement Model
2.7. Segmentation Model
2.7.1. Aorta Segmentation Model
2.7.2. Pulmonary Artery Segmentation Model
2.8. Vessel Diameter Measurement
3. Results
3.1. Patient Clinicopathological Features and Perioperative Results
3.2. Contrast Enhancement Model
3.3. Segmentation Model
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Conflicts of Interest
References
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AA and PA | Learning Rate | Decay | Epochs | Loss Function | Spatial Dropout 3D | Convolution Kernel Size | Activation Function | Output Layer Activation Function |
---|---|---|---|---|---|---|---|---|
Contrast enhancement model | 500 | Combination of MAE and DSSIM | 0.25 | 3 × 3 × 3 | ReLU | Sigmoid | ||
Segmentation model | Dice loss function |
Aorta | Pulmonary Artery | ||
---|---|---|---|
Model | DSC | Model | DSC |
1-AA | 0.97 ± 0.007 | 1-PA | 0.91 ± 0.002 |
2-PA | 0.93 ± 0.002 | ||
3D U-Net | 0.87 ± 0.025 | 3D U-Net | 0.87 ± 0.0004 |
Method | DSC | |
---|---|---|
Aorta | 2016 Jang et al. [25] | 0.95 ± 0.02 |
2009 Išgum et al. [26] | 0.87 ± 0.03 | |
2012 Kurugol et al. [27] | 0.93 ± 0.01 | |
2013 Avila-Montes et al. [28] | 0.88 ± 0.05 | |
2017 Dasgupta et al. [29] | 0.88 ± 0.06 | |
2014 Xie et al. [30] | 0.93 ± 0.01 | |
2015 Kurugol et al. [31]. | 0.92 ± 0.01 | |
2019 Gamechi et al. [32] | 0.95 ± 0.01 | |
2018 Noothout et al. [33] | 0.91 ± 0.04 | |
2021 Lartaud et al. [34] | 0.92 ± 0.02 | |
2020 Haq et al. [35] | 0.75 ≤ DSC ≤ 0.94 | |
2020 Morris et al. [36] | 0.85 ± 0.03 | |
2021 Sedghi Gamechi et al. [37] | 0.96 ± 0.01 | |
Proposed method | 0.97 ± 0.007 | |
Pulmonary artery | 2015 Xie et al. [38] | 0.88 |
2018 López-Linares et al. [39] | 0.89 ± 0.07 | |
2020 Haq et al. [35] | 0.80 ≤ DSC ≤ 0.91 | |
2020 Morris et al. [36] | 0.85 ± 0.03 | |
2021 Sedghi Gamechi et al. [37] | 0.94 ± 0.02 | |
Proposed method | 0.93 ± 0.002 |
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Wang, H.-J.; Chen, L.-W.; Lee, H.-Y.; Chung, Y.-J.; Lin, Y.-T.; Lee, Y.-C.; Chen, Y.-C.; Chen, C.-M.; Lin, M.-W. Automated 3D Segmentation of the Aorta and Pulmonary Artery on Non-Contrast-Enhanced Chest Computed Tomography Images in Lung Cancer Patients. Diagnostics 2022, 12, 967. https://doi.org/10.3390/diagnostics12040967
Wang H-J, Chen L-W, Lee H-Y, Chung Y-J, Lin Y-T, Lee Y-C, Chen Y-C, Chen C-M, Lin M-W. Automated 3D Segmentation of the Aorta and Pulmonary Artery on Non-Contrast-Enhanced Chest Computed Tomography Images in Lung Cancer Patients. Diagnostics. 2022; 12(4):967. https://doi.org/10.3390/diagnostics12040967
Chicago/Turabian StyleWang, Hao-Jen, Li-Wei Chen, Hsin-Ying Lee, Yu-Jung Chung, Yan-Ting Lin, Yi-Chieh Lee, Yi-Chang Chen, Chung-Ming Chen, and Mong-Wei Lin. 2022. "Automated 3D Segmentation of the Aorta and Pulmonary Artery on Non-Contrast-Enhanced Chest Computed Tomography Images in Lung Cancer Patients" Diagnostics 12, no. 4: 967. https://doi.org/10.3390/diagnostics12040967