1. Introduction
Atorvastatin is a strong, long-acting inhibitor of 3-hydroxy glutaryl co-enzyme A reductase (HMGCR), which is the rate-limiting step in the biosynthesis of cholesterol [
1]. Atorvastatin is used widely in the treatment of hypercholesterolemia [
2]. In addition, the guidelines of the American Association of Diabetes recommend using statin drugs for the prevention of cardiovascular complication of diabetes mellitus (DM) [
3]. Accordingly, physicians at the University of Jordan Hospital prescribe statins, especially atorvastatin, to DM2 patients. However, there is an inter-individual variation in the atorvastatin response. Some patients still have high cholesterol levels even when they are on statin treatment, and some patients suffer from statin-induced hepatotoxicity and myopathy [
4]. This inter-individual variation in drug response may be due to some environmental factors, such as food and drug–drug interactions, as well as genetic factors [
5]. It is reported that statin response is altered by genetic variants in genes encoding proteins involved in the pharmacodynamics and kinetics of the drugs [
6].
3-hydroxy glutaryl co-enzyme A reductase (HMGCR) and apolipoprotein E (ApoE) play a role in the pharmacodynamics of statins; HMGCR is the target of statin drugs, and ApoE is a carrier of lipids in the blood [
1]. Solute carrier organic anion 1B1 (SLCO1B1) transporter is responsible for the transportation of statins into hepatic cells, which is the major site of statin activity [
7]. Some studies among different ethnic groups report that genetic variants in the
HMGCR,
APOE, and
SLCO1B1 genes influence statin response [
8,
9,
10].
There are no reports regarding the influence of HMGCR, APOE, and SLCO1B1 genetic variants on statin response among DM2 patients of Jordanian Arabic origin. We hypothesized that genetic variants in these genes could at least partly explain the observed inter-individual variation in statin response. Therefore, the present study aimed to investigate the effect among Jordanian DM2 patients of major genetic variants HMGCR rs17244841, APOE rs7412 and rs429357, and SLCO1B1 rs2306283 and rs11045818 on the atorvastatin response, which is the most commonly used statin at the University of Jordan Hospital.
2. Materials and Methods
2.1. Chemicals
Isopropanol and 70% ethanol were obtained from Sigma-Aldrich (Sant Louis, MO, USA), and 100 base pair (bp) DNA ladder and PCR master mix were purchased from Promega (Madison, WI, USA). Oligo DNA primers were purchased from Integrated DNA Technologies (Coralville, IA, USA). Agarose powder was purchased from Seakem R LE agarose (Lonza, NJ, USA).
2.2. Patients
This study was a cross-sectional study conducted from 11/2018 to 1/2020. The study included 139 DM2 patients who were on 20 mg of atorvastatin and were regularly attending the Diabetes Clinic at Jordan University Hospital. The patients had just started atorvastatin. We chose atorvastatin among other statins because it is the most common one used in the University of Jordan Hospital. The DM2 patients continued taking 20 mg of atorvastatin daily for 3 months. Diabetic patients were excluded if (1) they were on other statin drugs, such as rosuvastatin, pravastatin, or simvastatin; (2) they had any other chronic disease, such as cardiovascular diseases; or (3) they had missing lipid or glycemic data profiles. Ethical approval was provided by the Institutional Review Board of Jordan University Hospital (number 67/2018/225). Informed consent was obtained from every patient before starting atorvastatin treatment.
According to the records of The Jordan University Hospital, an average of 250 Jordanian Arabic DM2 patients, without any other chronic diseases, were prescribed 20 mg atorvastatin last year. It was calculated that 139 sample size represents the DM2 patients on 20 mg atorvastatin therapy using the power of test 1 − β = 0.8, 5% margin of error, and 95% confidence level.
2.3. Data Collection
Jordan University Hospital’s computer records were used to obtain demographic data and the results of blood lipid and glucose profile analyses for total cholesterol, low-density lipoprotein (LDL), high-density lipoprotein (HDL), triglyceride (TG), and glycated hemoglobin (HbA1c %).
2.4. Calculation of Atorvastatin Response
The atorvastatin response was calculated as percentage (%) as follows:
Atorvastatin response = [(Lipid, glycemic, or hepatic enzyme level after 3 months of atorvastatin treatment-Lipid, glycemic, or hepatic enzyme level before 3 months of atorvastatin treatment)/Lipid, glycemic, or hepatic enzyme level before 3 months of atorvastatin treatment] × 100
2.5. Blood Collection and DNA Extraction
EDTA tubes were used to collect 5 mL venous blood samples. DNA was isolated from the whole blood using a Wizard
® Genomic DNA purification kit (USA) according to the manufacturer’s instructions. The concentration (ng/µL) and the purity (A260/A280) of DNA were measured using an ultraviolet NanoDrop spectrophotometer. The accepted purity ratio of the extracted DNA was within 1.8 ± 0.1 [
11].
2.6. Polymerase Chain Reaction
Specific DNA sequences containing
HMGCR rs17244841,
APOE rs7412 and
rs429357, and
SLCO1B1 rs2306283 and
rs11045818 genetic variants were amplified using polymerase chain reaction (PCR). The PCR mixture was prepared in a total volume of 50 µL containing 50 ng of isolated DNA, 10 pmole of each forward and reverse primer (
Table S1), and PCR master mixture containing MgCl
2, dNTPs, Taq DNA polymerase, and free-nuclease water. The primer sequences were obtained from the literature [
12,
13]. The PCRs were done using a Bio-Rad thermal cycler with the following cycling parameters: initial denaturation for 5 min at 95 °C and 30 cycles of 95 °C for 30 s, 56–62 °C for 30 s, and 72 °C for 30 s. The PCR reaction was completed by a final extension step at 72 °C for 5 min. The PCR products were then separated using 2% agarose gel electrophoresis.
2.7. DNA Sequencing
The samples of PCR product were sent to the GENEWIZ Company (South Plainfield, NJ, USA) for sequencing the amplified nucleotide sequences of the targeted
HMGCR,
APOE, and
SLCO1B1 genes using the Sanger sequencing method [
14]. The same forward and reverse primers used in the PCR reaction were also used for the DNA sequencing. Sequence analysis was performed using an Applied Biosystems Model ABI373x1. The alignment of the DNA sequence was done using Multialign software [
15]. The DNA sequence chromatograms were visualized by DNA Based v3.5.4 software (Heracle BioSoft, Romania). The template sequence of the
HMGCR,
APOE, and
SLCO1B1 genes in
Homo sapiens were obtained from the GenBank database [
16].
2.8. Statistical Analyses
Statistical analyses were performed using the Statistical Package for Social Sciences (SPSS Inc., Chicago, IL, USA) version 23 for Windows. The lipid profile data of the volunteers were normally distributed according to the Kolmogorov–Smirnov test. A one-way analysis of variance (ANOVA) test and Tukey’s HSD post-hoc test were used to analyze the differences in atorvastatin response among different groups of SLCO1B1 rs2306283 genotypes. The homozygous genotype was not detected among the DM2 patients, for HMGCR rs17244841, APO rs7412, and SLCO1B1 rs11045818 genotypes, so a student t-test was used to compare the mean values between the “wild” and heterozygous genotypes. One-tailed t-test was used to compare between the 2 groups since we hypothesized that these genetic variants decrease atorvastatin response. A difference was considered significant when the p-value was less than 0.05. Deviation of the observed genotype frequency from Hardy–Weinberg equilibrium was determined using a chi-squared (X2) test.
4. Discussion
There is wide inter-individual variation in the atorvastatin response among DM2 patients attending the University of Jordan Hospital. Variation in atorvastatin response can be due to multiple factors, such as patient adherence, health status, and drug–drug interaction [
17]. However, we have clearly shown that
APOE rs7412 T and
SLCO1B1 rs2306283 G alleles significantly reduced the atorvastatin response, with DM2 patients carrying these alleles having significantly higher lipid levels than patients with wild alleles. Additionally,
SLCO1B1 rs2306283 G and
rs11045818 A variants were associated with a significant elevation in ALT levels after atorvastatin treatment. Hence, these variants might play a role in the risk of atorvastatin-induced hepatotoxicity. These findings suggest that
APOE rs7412 and
SLCO1B1 rs2306283 and
rs11045818 genetic variants are potential genetic biomarkers for atorvastatin response among DM2 patients of Jordanian Arabic origin. Further clinical studies are needed to confirm the findings of this study with a larger sample size.
This study is not the first to investigate the influence of genetic variants on atorvastatin response among DM2 patients attending the University of Jordan Hospital. Abdullah et al. (2020) studied the effect of endothelial nitric oxide synthase
rs2070744,
rs1799983, and
rs61722009 genetic variants on atorvastatin response among Jordanian DM2 patients [
18]. They found that those genetic variants were not associated with atorvastatin response. In addition, Hneet et al. (2020) did not find any influence of
CYP7A1 and
ABCG8 genetic variants on atorvastatin response among DM2 Jordanian patients [
19]. However, the present study showed that
APOE rs7412,
SLCO1B1 rs2306283, and
rs11045818 variants significantly affected atorvastatin response among DM2 patients of Jordanian Arabic origin for the first time.
Some studies showed that the
HMGCR rs17244841 genetic variant affects statin response [
20,
21], but we did not find an influence among these patients. This might be due to ethnic differences in the frequency of the
HMGCR rs17244841 variant between Jordanians and other ethnic groups. Additionally, this is the first study to investigate the influence of the
HMGCR rs17244841 variant on statin response among DM2 patients. The diabetic disease causes physiological and biochemical alterations that can mask the effects of genetic variants on drug response [
22]. According to the On Pharmacogenomics Knowledge Base (PharmGKB) website, the
HMGCR rs17244841 genetic variant has level 3 clinical evidence, which indicates that not enough clinical results support the clinical implementation of
HMGCR rs17244841 variant in statin therapy [
23]. The results of this study support that the
HMGCR rs17244841 variant does not have a significant clinical impact on atorvastatin response among DM2 patients.
ApoE plays a major role as a carrier and transporter of cholesterol in the blood and has a role in the metabolism and elimination of cholesterol. Functional genetic variants in the
APOE gene affect ApoE function and hence cholesterol transport and statin response [
24]. We showed that the
APOE rs7412 T allele decreased the atorvastatin response, and
APOE rs7412 C/T genotype DM2 patients had a significantly lower response to atorvastatin. This result is in agreement with the report by Lagos et al. that the
APOE rs7412 variant reduced statin response among Chilean subjects [
25]. However, our findings contrast with a previous report that the
APOE rs7412 T allele increases statin response [
26]. Therefore, further clinical studies are needed to find out the exact influence of the
APOE rs7412 variant on atorvastatin response.
According to the ACC/AHA guideline classification of statin intensity [
27], 20 mg atorvastatin is effective when it produces a 30 to 50% decrease in LDL and blood lipid levels. We found that atorvastatin decreased TC and LDL by 22 and 31%, respectively, among patients with wild
APO rs7412 genotype. Besides, atorvastatin decreased TC and LDL by only 7.5% and 10%, respectively, among patients with heterozygous
APO rs7412 genotype. Accordingly, DM2 patients with wild
APO rs7412 genotype responded, while patients with heterozygous genotype did not respond, to atorvastatin therapy. Therefore, DM2 patients with heterozygous
APO rs7412 genotype are at higher risk of treatment failure with atorvastatin, which may lead to cardiovascular complications.
The major site of action of statins is the liver. Statins enter hepatic cells through SLCO1B1. It is reported that the
SLCO1B1 rs2306283 G variant decreases the capacity of SLCO1B1 transporter [
28]. Accordingly, the influx of statins inside hepatic cells is reduced in patients with the
SLCO1B1 rs2306283 G allele, and the anti-hypercholesterolemic effect is decreased. This could explain the reduced atorvastatin response among DM2 patients with the
SLCO1B1 rs2306283 G genotype.
Some studies showed that
SLCO1B1 genetic variants are strongly associated with statin-induced myopathy [
29]. We found that DM2 patients with
SLCO1B1 rs2306283 G and
rs11045818 A alleles have a significantly higher blood level of ALT enzyme, although the mean of the elevated ALT level was within the normal ALT range (<30 IU/L). Elevated ALT levels might indicate a higher risk of hepatotoxicity [
30]. It was reported that
SLCO1B1 genetic variants are associated with drug-induced hepatotoxicity [
31,
32].
The mechanism of how
SLCO1B1 rs2306283 G and
rs11045818 A variants can affect ALT level is still not clear. Although
SLCO1B1 rs11045818 A is a synonymous variant, it might be in a linkage disequilibrium with other functional variants that have a clinical influence on atorvastatin response. Using Haploview software [
33], we found a moderate LD (D = 0.8) between
SLCO1B1 rs11045818 and the functionally non-synonymous
SLCO1B1 rs2306283. The level of clinical evidence of
SLCO1B1 rs2306283 and
rs11045818 on the PharmGKB website is 3. Since we found a significant association between these variants and atorvastatin response, we recommend investigating these variants’ effects on atorvastatin response among different ethnic groups with a larger sample size.
There are some limitations to this study. First, the sample size was relatively small, and these findings should be confirmed using a larger sample size. Second, other factors affecting statin response, such as drug–drug interactions, drug–food interactions, and patient adherence, were not included in this study. Third, genetic variants of cytochrome P450s, which metabolize statins, were not studied. Lastly, the patients were on adjusted doses of anti-diabetic metformin therapy, which affects the lipid and glycemic profiles of DM2 patients.