Expansion of the Phenotypic Spectrum of TNRC6B-Related Neurodevelopmental Disorder in a Three-Generation Family with 22q13.1 Deletion
Abstract
1. Introduction
2. Methods
2.1. Genetic Testing
2.2. Clinical Assessment
2.3. Literature Review
2.4. Ethical Considerations
3. Case Report
3.1. Proband (IV-3; See Figure 1)

3.2. Sister (IV-2)
3.3. Sister (IV-1)
3.4. Father (III-2)
3.5. Paternal Grandmother (II-2)
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| RNA | Ribonucleic acid |
| miRNA | Micro-Ribonucleic acid |
| ADHD | Attention Deficit Hyperactivity Disorder |
| CNV | Copy-number variant |
| RISC | RNA-induced silencing complex |
| AGO | Argonaute |
| mRNA | Messenger Ribonucleic acid |
| GW | glycine–tryptophan |
| UBA | ubiquitin-associated |
| RRM | RNA recognition motif |
| DDD | Deciphering Developmental Disorders |
| CMA | Chromosomal microarray |
| MRI | Magnetic Resonance Imaging |
| SNP | Single Nucleotide Polymorphism |
| APGAR | Appearance, Pulse, Grimace, Activity, Respiration |
| IQ | Intelligence Quotient |
| WPSSI-R | Wechsler Preschool and Primary Scale of Intelligence—Revised |
| WISC-III | Wechsler Intelligence Scale for Children—Third Edition |
| ASD | autism spectrum disorder |
| ADOS | Autism Diagnostic Observation Schedule |
| ODD | Oppositional Defiant Disorder |
| CT | Computed Tomography |
| ID | Intellectual disability |
| TOF | tetralogy of Fallot |
| PCGC | Paediatric Cardiac Genomics Consortium |
| PTCs | premature termination codons |
| NMD | nonsense-mediated decay |
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| Source | Sex | Age (Rounded to Nearest Full Year) | Developmental Delay/Intellectual Disability | IQ | ASD | ADHD | Other Behavioural Issues | Inheritance | Musculoskeletal/Connective Tissue Features | Other Congenital Malformations | Other Medical Problems |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Current | F | 1 | present | Not available | Too young | Too young | Head banging | Paternal | Joint laxity | absent | absent |
| Current | F | 3 | absent | Not available | Suspected | unknown | Head banging | Paternal | Mild joint laxity | absent | absent |
| Current | M | 28 | present | WPSSIR: 75 WISCIII: 83 | absent | present | ODD, behavioural dysregulation | Maternal | Joint laxity | Mitral valve prolapse, sparse hair | absent |
| Current | F | 52 | present | Not available | absent | absent | absent | Unknown (parents deceased) | Joint laxity, craniosynostosis | absent | Repeated ear infections resulting in hearing loss, bilateral inguinal hernias |
| Yang et al. 2024 [10] | F | 7 | present | 51 | absent | present | Irritability, poor concentration | De novo | absent | Abnormal brain MRI, sparse hair, abnormal EEG | absent |
| Yang et al. 2024 [10] | M | 3 | present | 96 | absent | absent | absent | De novo | absent | Café-au-lait macules, short stature | Metabolic abnormalities |
| Yahia et al. 2024 [11] | unknown | unknown | present | Not available | unknown | unknown | Behavioural abnormalities | De novo | unknown | unknown | unknown |
| Bellido-Cuellar et al. 2023 [12] | F | 31 | absent | WASI-II: 84/87/84 | present | present | absent | De novo | Joint laxity, scoliosis | Abnormal EEG | absent |
| Granadillo et al. 2020 [9] #1 | M | 6 | present | Not available | Poor socialisation | present | absent | Unknown | absent | PFO, dilated aortic root, RV conduction delay, Chiari type 1 malformation, congenital entropian | absent |
| Granadillo et al. 2020 [9] #2 | M | 6 | present | Not available | present | present | absent | De novo | absent | ||
| Granadillo et al. 2020 [9] #3 | F | 3.7 | present | Not available | present | present | absent | De novo | absent | Right temporal arachnoid cyst | |
| Granadillo et al. 2020 [9] #4 | F | 11 | present | IQ—73 DQ 76 Nonverbal 95 | Autistic features | present | Anxiety, depression, behavioural difficulties | De novo | Hypermobility of elbows, slender fingers and build | Chiari Type 1 malformation, Bilateral SNHL | Chronic otitis media, intermittent staring spells with normal EEG |
| Granadillo et al. 2020 [9] #5 | M | 6 | present | Not available | Autistic features | absent | Aggressiveness | Paternal | absent | Hydrocele, sacral dimple, abnormal aorta and abnormal origin of R coronary artery, microcephaly, bilateral SNHL | Inguinal hernia, GERD, feeding issues |
| Granadillo et al. 2020 [9] #6 | M | 15 | present | 97 | present | present | ODD | Maternal | Small joint hypermobility | absent | absent |
| Granadillo et al. 2020 [9] #7 | M | 12 | present | VIQ: 105 PIQ: 85 | present | present | absent | De novo | Joint hypermobility | absent | Benign nocturnal alternating hemiplegia of childhood |
| Granadillo et al. 2020 [9] #8 | M | 12 | present | 63 | Autistic features | present | absent | De novo | Sprengel anomaly | absent | SCAD deficiency |
| Granadillo et al. 2020 [9] #9 | M | 17 | present | 73 | present | absent | absent | Unknown | Recurrent patella subluxation bilaterally | Left supernumerary nipple | absent |
| Granadillo et al. 2020 [9] #10 | M | 13 | present | 72 | present | absent | absent | De novo | Pes planus, hyperpigmentary lesions on wrist and upper leg | Left supernumerary nipple | Recurrent ear infections |
| Granadillo et al. 2020 [9] #11 | M | 13 | present | 55 | absent | absent | Impulsivity | De novo | Muscle weakness | Abnormal brain MRI | Hyperreflexia |
| Granadillo et al. 2020 [9] #12 | M | 2.6 | present | 53 | present | absent | absent | De novo | absent | absent | Myoclonus epilepsy |
| Granadillo et al. 2020 [9] #13 | M | 14 | present | WISC: VCI 79, PRI 71, PSI 73 | present | present | absent | Maternal | Broad palms, tibial malformation | Cryptorchidism | absent |
| Granadillo et al. 2020 [9] #14 | F | 10 | present | 80 | absent | present | absent | De novo | Clinodactyly | Imperforate anus, vestibular fistula | Central precocious puberty |
| Granadillo et al. 2020 [9] #15 | F | 11 | present | 50 | absent | present | Anger with tremor | Unknown | Joint hypermobility | absent | Bilateral inguinal hernia |
| Granadillo et al. 2020 [9] #16 | F | 6 | present | WASI-II FS-IQ 113, Verbal Comprehension 131 | absent | present | Impulsivity | Unknown | Pes planus, scoliosis, muscle atrophy in legs | Conductive hearing loss | Constipation, recurrent ear infections |
| Granadillo et al. 2020 [9] #17 | M | 16 | present | Not available | Autistic features | absent | absent | De novo | Marfanoid features. joint pain, long slender fingers | Wide aortic root | Swallowing difficulties |
| Eising et al. 2019 [13] | F | 4 | absent | “average” | present | unknown | unknown | Unknown | unknown | unknown | unknown |
| Iossifov et al. 2014 [8] | M | unknown | unknown | 78 | present | unknown | unknown | unknown | unknown | unknown | unknown |
| Iossifov et al. 2014 [8] | M | unknown | unknown | 81 | present | unknown | unknown | unknown | unknown | unknown | unknown |
| The following may have a second genetic variant contributing to phenotype | |||||||||||
| Babbs et al. 2014 [14] Pericentric inversion disrupting TCF20 and TNRC6B | M | 1 | present | 79 | present | absent | absent | Presumed parental mosaicism | Metopic and coronal synostosis | absent | absent |
| Babbs et al. 2014 [14] Pericentric inversion disrupting TCF20 and TNRC6B | M | 10 | present | Moderate to severe on Vineland Adaptive Behavioural Scores | present | absent | absent | Presumed parental mosaicism | absent | absent | absent |
| Mitani et al. 2021 [15] Also homozygous for ADSL: NM_000026.4; c.1277G>A (p.Arg426His) | M | 2 | present | Not available | absent | present | absent | Homozygous for a missense variant in TNRC6B | absent | Abnormal brain MRI | absent |
| Mitani et al. 2021 [15] Also homozygous for ADSL: NM_000026.4; c.1277G>A (p.Arg426His) | F | 10 | present | Not available | absent | present | absent | Homozygous for a missense variant in TNRC6B | absent | absent | absent |
| Deng et al. 2025 [16] Also had Xq28 intragenic microdeletion involving exons 2 and 3 of MECP2 | F | 1.5 | present | <1%ile on Griffith Mental Developmental Scales | absent | absent | absent | unknown | absent | absent | Short stature (z-score: 5.29), microcephaly |
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Archer, J.; O’Donnell, S.; Buckman, M.; Bain, N.; Goel, H. Expansion of the Phenotypic Spectrum of TNRC6B-Related Neurodevelopmental Disorder in a Three-Generation Family with 22q13.1 Deletion. Genes 2026, 17, 464. https://doi.org/10.3390/genes17040464
Archer J, O’Donnell S, Buckman M, Bain N, Goel H. Expansion of the Phenotypic Spectrum of TNRC6B-Related Neurodevelopmental Disorder in a Three-Generation Family with 22q13.1 Deletion. Genes. 2026; 17(4):464. https://doi.org/10.3390/genes17040464
Chicago/Turabian StyleArcher, Jessica, Sheridan O’Donnell, Melissa Buckman, Nicole Bain, and Himanshu Goel. 2026. "Expansion of the Phenotypic Spectrum of TNRC6B-Related Neurodevelopmental Disorder in a Three-Generation Family with 22q13.1 Deletion" Genes 17, no. 4: 464. https://doi.org/10.3390/genes17040464
APA StyleArcher, J., O’Donnell, S., Buckman, M., Bain, N., & Goel, H. (2026). Expansion of the Phenotypic Spectrum of TNRC6B-Related Neurodevelopmental Disorder in a Three-Generation Family with 22q13.1 Deletion. Genes, 17(4), 464. https://doi.org/10.3390/genes17040464

