A Novel Plasma-Based Methylation Panel for Upper Gastrointestinal Cancer Early Detection
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Sample Collection
2.2. Cell Free DNA Extraction, Bisulfite Treatment
2.3. Quantitative Methylation-Specific PCR
2.4. Analytic Performance Analysis
2.5. Data Analysis
3. Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Total Number | Gender | Age | |||
---|---|---|---|---|---|
Male (n, %) | Female (n, %) | Min–Max | Median | ||
UGC | 186 | 136 (73.1) | 50 (26.9) | 28–90 | 68 |
EC | 48 | 42 (87.5) | 6 (12.5) | 52–90 | 68 |
EJC | 29 | 22 (75.9) | 7 (24.1) | 50–87 | 71 |
GC | 109 | 72 (66.1) | 37 (33.9) | 28–86 | 64 |
Control | 190 | 74 (38.9) | 116 (61.1) | 23–79 | 45 |
Characteristics | Total Number | Positive Number | Sensitivity (%) | p-Value | |
---|---|---|---|---|---|
UGC | |||||
Gender | Male | 136 | 92 | 67.6 | 0.100 |
Female | 50 | 40 | 80.0 | ||
Age | <60 | 47 | 31 | 66.0 | 0.629 |
60–70 | 77 | 57 | 74.0 | ||
>70 | 62 | 45 | 72.6 | ||
GC | |||||
Gender | Male | 72 | 47 | 65.3 | 0.415 |
Female | 37 | 27 | 73.0 | ||
Age | <60 | 39 | 24 | 61.5 | 0.376 |
60–70 | 41 | 31 | 75.6 | ||
>70 | 29 | 19 | 65.5 | ||
EJC | |||||
Gender | Male | 22 | 13 | 59.1 | 0.042 |
Female | 7 | 7 | 100.0 | ||
Age | <60 | 2 | 2 | 100.0 | 0.050 |
60–70 | 11 | 5 | 45.5 | ||
>70 | 16 | 14 | 87.5 | ||
EC | |||||
Gender | Male | 42 | 32 | 76.2 | 0.179 |
Female | 6 | 6 | 100.0 | ||
Age | <60 | 6 | 5 | 83.3 | 0.622 |
60–70 | 25 | 21 | 84.0 | ||
>70 | 17 | 12 | 70.6 |
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Peng, C.; Zhao, G.; Pei, B.; Wang, K.; Li, H.; Fei, S.; Song, L.; Wang, C.; Xiong, S.; Xue, Y.; et al. A Novel Plasma-Based Methylation Panel for Upper Gastrointestinal Cancer Early Detection. Cancers 2022, 14, 5282. https://doi.org/10.3390/cancers14215282
Peng C, Zhao G, Pei B, Wang K, Li H, Fei S, Song L, Wang C, Xiong S, Xue Y, et al. A Novel Plasma-Based Methylation Panel for Upper Gastrointestinal Cancer Early Detection. Cancers. 2022; 14(21):5282. https://doi.org/10.3390/cancers14215282
Chicago/Turabian StylePeng, Cheng, Guodong Zhao, Bing Pei, Kai Wang, Hui Li, Sujuan Fei, Lishuang Song, Chunkai Wang, Shangmin Xiong, Ying Xue, and et al. 2022. "A Novel Plasma-Based Methylation Panel for Upper Gastrointestinal Cancer Early Detection" Cancers 14, no. 21: 5282. https://doi.org/10.3390/cancers14215282
APA StylePeng, C., Zhao, G., Pei, B., Wang, K., Li, H., Fei, S., Song, L., Wang, C., Xiong, S., Xue, Y., He, Q., & Zheng, M. (2022). A Novel Plasma-Based Methylation Panel for Upper Gastrointestinal Cancer Early Detection. Cancers, 14(21), 5282. https://doi.org/10.3390/cancers14215282