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Article

Building Sub-Saharan African PBPK Populations Reveals Critical Data Gaps: A Case Study on Aflatoxin B1

by
Orphélie Lootens
1,2,3,4,*,
Marthe De Boevre
1,3,4,
Sarah De Saeger
1,3,4,5,
Jan Van Bocxlaer
2 and
An Vermeulen
2
1
Centre of Excellence in Mycotoxicology and Public Health, Department of Bioanalysis, Ghent University, 9000 Ghent, Belgium
2
Laboratory of Medical Biochemistry and Clinical Analysis, Department of Bioanalysis, Ghent University, 9000 Ghent, Belgium
3
MYTOX-SOUTH®, International Thematic Network, 9000 Ghent, Belgium
4
Cancer Research Institute Ghent (CRIG), 9000 Ghent, Belgium
5
Department of Biotechnology and Food Technology, University of Johannesburg, P.O. Box 17011, 2028 Gauteng, South Africa
*
Author to whom correspondence should be addressed.
Toxins 2025, 17(10), 493; https://doi.org/10.3390/toxins17100493
Submission received: 11 August 2025 / Revised: 21 September 2025 / Accepted: 1 October 2025 / Published: 3 October 2025
(This article belongs to the Special Issue Mycotoxins in Food and Feeds: Human Health and Animal Nutrition)

Abstract

Physiologically based pharmacokinetic (PBPK) models allow to simulate the behaviour of compounds in diverse physiological populations. However, the categorization of individuals into distinct populations raises questions regarding the classification criteria. In previous research, simulations of the pharmacokinetics of the mycotoxin aflatoxin B1 (AFB1), were performed in the black South African population, using PBPK modeling. This study investigates the prevalence of clinical CYP450 phenotypes (CYP2B6, CYP2C9, CYP2C19, CYP2D6, CYP3A4/5) across Sub-Saharan Africa (SSA), to determine the feasibility of defining SSA as a single population. SSA was subdivided into Central, East, South and West Africa. The phenotype data were assigned to the different regions and a fifth SSA group was composed of all regions’ weighted means. Available data from literature only covered 7.30% of Central, 56.9% of East, 38.9% of South and 62.9% of West Africa, clearly indicating critical data gaps. A pairwise proportion test was performed between the regions on enzyme phenotype data. When achieving statistical significance (p < 0.05), a Cohen’s d-test was performed to determine the degree of the difference. Next, per region populations were built using SimCYP starting from the available SSA based SouthAfrican_Population FW_Custom population, supplemented with the phenotype data from literature. Simulations were performed using CYP probe substrates in all populations, and derived PK parameters (Cmax, Tmax, AUCss and CL) were plotted in bar charts. Significant differences between the African regions regarding CYP450 phenotype frequencies were shown for CYP2B6, CYP2C19 and CYP2D6. Limited regional data challenge the representation of SSA populations in these models. The scarce availability of in vivo data for SSA regions restricted the ability to fully validate the developed PBPK populations. However, observed literature data from specific SSA regions provided partial validation, indicating that SSA populations should ideally be modelled at a regional level rather than as a single entity. The findings, emerging from the initial AFB1-focused PBPK work, underscore the need for more extensive and region-specific data to enhance model accuracy and predictive value across SSA.
Keywords: CYP450-enzymes; pharmacokinetics; genetics; PBPK; diversity; Sub-Saharan Africa CYP450-enzymes; pharmacokinetics; genetics; PBPK; diversity; Sub-Saharan Africa

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MDPI and ACS Style

Lootens, O.; De Boevre, M.; De Saeger, S.; Van Bocxlaer, J.; Vermeulen, A. Building Sub-Saharan African PBPK Populations Reveals Critical Data Gaps: A Case Study on Aflatoxin B1. Toxins 2025, 17, 493. https://doi.org/10.3390/toxins17100493

AMA Style

Lootens O, De Boevre M, De Saeger S, Van Bocxlaer J, Vermeulen A. Building Sub-Saharan African PBPK Populations Reveals Critical Data Gaps: A Case Study on Aflatoxin B1. Toxins. 2025; 17(10):493. https://doi.org/10.3390/toxins17100493

Chicago/Turabian Style

Lootens, Orphélie, Marthe De Boevre, Sarah De Saeger, Jan Van Bocxlaer, and An Vermeulen. 2025. "Building Sub-Saharan African PBPK Populations Reveals Critical Data Gaps: A Case Study on Aflatoxin B1" Toxins 17, no. 10: 493. https://doi.org/10.3390/toxins17100493

APA Style

Lootens, O., De Boevre, M., De Saeger, S., Van Bocxlaer, J., & Vermeulen, A. (2025). Building Sub-Saharan African PBPK Populations Reveals Critical Data Gaps: A Case Study on Aflatoxin B1. Toxins, 17(10), 493. https://doi.org/10.3390/toxins17100493

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