Pharmacogenomics of Rivaroxaban: Association of CYP3A4, CYP3A5, CYP2J2, ABCB1, and ABCG2 Variants with Bleeding and Thrombotic Outcomes in Real-World Clinical Practice †
Abstract
1. Introduction
2. Materials and Methods
2.1. Study Outline
2.2. Patients, Patient Management and Follow-Up
2.3. Genotyping
2.4. Statistical Analysis
3. Results
3.1. Cohort Characteristics
3.2. Bleeding Events
3.3. Occlusive Events
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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| CYP Enzymes | n (%) | Transporters | n (%) |
|---|---|---|---|
| CYP3A4*1B (rs2740574) genotype | ABCG2 c.421C>A (rs2231142) | ||
| *1/*1 | 371 (96.4) | C/C | 314 (81.5) |
| *1/*3 | 13 (3.4) | C/A | 68 (17.7) |
| *3/*3 | 1 (0.2) | A/A | 3 (0.8) |
| Variant allele frequency | 1.9% | Variant allele frequency | 9.6% |
| CYP3A4*22 (rs35599367) genotype | ABCG2 phenotype per rs2231142 | ||
| *1/*1 | 361 (93.8) | Normal activity | 314 (81.5) |
| *1/*22 | 23 (6.0) | Reduced activity | 71 (18.5) |
| *22/*22 | 1 (0.2) | ABCB1 c.1236C>T (rs1128503) | |
| Variant allele frequency | 3.2% | C/C | 124 (32.2) |
| CYP3A4 phenotype | C/T | 183 (47.5) | |
| Normal metabolizer (NM) | 361 (93.8) | T/T | 78 (20.3) |
| Intermediate metabolizer (IM) | 23 (6.0) | Variant allele frequency | 44.0% |
| Poor metabolizer (PM) | 1 (0.2) | ABCB1 c.2677G>T/A (rs2032582) | |
| CYP3A5*3 (rs776746) genotype | G/G | 158 (41.0) | |
| *1/*1 | 2 (0.5) | G/T or G/A | 145 (37.7) |
| *1/*3 | 38 (9.9) | T/T or T/A or A/A | 82 (21.3) |
| *3/*3 | 345 (89.6) | Variant allele frequency | 40.1% |
| Variant allele frequency | 94.5% | ABCB1 c.3435C>T (rs1045642) | |
| CYP3A5*3 phenotype | C/C | 89 (23.1) | |
| Enzyme expressors | 40 (10.4) | C/T | 177 (46.0) |
| Non-expressors | 345 (89.6) | T/T | 119 (30.9) |
| CYP3A combined phenotype | Variant allele frequency | 53.9% | |
| Poor metabolizer (PM) | 24 (6.2) | ABCB1 phenotype per rs1045642 | |
| Intermediate metabolizer (IM) | 322 (83.6) | Normal function | 266 (69.1) |
| Rapid metabolizer (RM) | 39 (10.1) | Reduced function | 119 (30.9) |
| CYP2J2*7 (rs890293) genotype | ABCB1 c.2482-2236G>A (rs4148738) | ||
| *1/*1 | 339 (88.1) | G/G | 109 (28.3) |
| *1/*7 | 46 (11.9) | G/A | 184 (47.8) |
| *7/*7 | 0 | A/A | 92 (23.9) |
| Variant allele frequency | 6.0% | Variant allele frequency | 47.8% |
| CYP2J2*7 phenotype | ABCB1 phenotype per rs4148738 | ||
| Normal activity | 339 (88.1) | Normal activity | 109 (28.3) |
| Reduced activity | 46 (11.9) | Increased/extensive activity | 276 (71.7) |
| CYP2J2 c.A>T (rs11572325) | |||
| A/A | 302 (78.4) | ||
| A/T | 79 (20.5) | ||
| T/T | 4 (1.0) | ||
| Variant allele frequency | 11.3% |
| Cases (Bleeding) | Controls (No Bleeding) | |
|---|---|---|
| N | 71 | 314 |
| Demographics and renal function | ||
| Age (years) | 74 (67–80; 30–88) | 66 (57–72; 26–98) |
| Males | 41 (57.8) | 197 (62.7) |
| eGFR (mL/min/1.73 m2) | 69 (47–85; 10–104) | 76 (60–90; 15–125) |
| Indication of rivaroxaban | ||
| Nonvalvular atrial fibrillation/atrial flutter | 57 (80.3) | 227 (72.3) |
| Peripheral artery disease | 12 (16.9) | 56 (17.8) |
| Venous thromboembolism | 12 (16.9) | 40 (12.7) |
| Ischemic stroke/TIA | 7 (9.9) | 50 (15.9) |
| Coronary heart disease/acute myocardial infarction | 23 (32.4) | 72 (22.9) |
| Thrombus in the left atrial apex/appendage | 2 (2.8) | 7 (2.2) |
| Adult congenital heart disease | 0 | 6 (1.9) |
| Thrombophilia | 2 (2.8) | 6 (1.9) |
| Daily rivaroxaban dose | ||
| 1 × 20 mg | 41 (57.8) | 232 (73.9) |
| 1 × 15 mg | 20 (28.2) | 33 (10.5) |
| 1 × 10 mg | 7 (9.9) | 5 (1.6) |
| 2 × 2.5 mg (total 5 mg) | 3 (4.2) | 44 (14.0) |
| Comorbidities | ||
| Hypertension | 64 (90.1) | 253 (80.6) |
| Dyslipidemia | 46 (64.8) | 222 (70.7) |
| GI disease (peptic ulcer/diverticulosis/polyps/IBD) | 32 (45.1) | 24 (7.6) |
| Malignancy (solid organ/hematological) | 20 (28.1) (16 + 4) | 51 (16.3) (41 + 10) |
| Diabetes mellitus | 14 (19.7) | 71 (22.6) |
| Anxious or depressive disorder | 9 (12.7) | 30 (9.6) |
| Systemic inflammatory disease | 4 (4.6) | 7 (2.2) |
| Musculoskeletal pain syndromes | 3 (4.2) | 18 (5.7) |
| Cases (Bleeding) | Controls (No Bleeding) | |
|---|---|---|
| N | 71 | 314 |
| Proton pump inhibitors | 49 (69.0) | 226 (72.0) |
| Platelet aggregation inhibitors | 15 (21.1) | 67 (21.1) |
| Dual antiplatelet therapy | 5 (7.0) | 10 (3.2) |
| CYP3A4 inhibitors | ||
| 0 | 47 (66.7) | 186 (59.2) |
| At least 1 (1 to 3) | 24 (33.8) | 128 (40.8) |
| CYP3A4 substrates | ||
| 0 | 3 (4.2) | 21 (6.7) |
| 1–2 | 30 (42.3) | 125 (39.8) |
| 3 or more | 38 (53.5) | 168 (53.5) |
| CYP3A5 inhibitors | ||
| 0 | 64 (90.1) | 269 (85.7) |
| At least 1 (1–2) | 7 (9.9) | 45 (14.3) |
| CYP3A5 substrates | ||
| 0 | 26 (36.6) | 123 (39.2) |
| 1–2 | 40 (56.3) | 159 (50.6) |
| 3 or more | 5 (7.1) | 32 (10.2) |
| CYP2J2 inhibitors | ||
| 0 | 55 (77.5) | 241 (76.8) |
| 1–2 | 16 (22.5) | 73 (23.2) |
| ABCB1 inhibitors | ||
| 0 | 4 (5.6) | 30 (9.5) |
| 1–2 | 40 (56.3) | 164 (52.3) |
| 3 or more | 27 (38.1) | 120 (38.2) |
| ABCB1 inducers | ||
| 0 | 64 (90.1) | 279 (88.8) |
| 1–2 | 7 (9.9) | 35 (11.2) |
| ABCB1 substrates | ||
| 0 | 4 (5.6) | 24 (7.6) |
| 1–2 | 43 (60.6) | 182 (58.0) |
| 3 or more | 24 (33.7) | 108 (34.4) |
| ABCG2 inhibitors | ||
| 0 | 24 (33.8) | 92 (29.3) |
| 1 | 47 (66.2) | 222 (70.7) |
| ABCG2 substrates | ||
| 0 | 13 (18.3) | 28 (8.9) |
| 1–2 | 53 (74.6) | 254 (80.9) |
| 3 or more | 5 (7.1) | 32 (10.2) |
| Cases (Bleeding) | Controls (No Bleeding) | |
|---|---|---|
| N | 71 | 314 |
| CYP3A phenotype | ||
| Rapid/intermediate metabolizer | 68 (95.8) | 294 (93.6) |
| Poor metabolizer | 4 (4.2) | 20 (6.4) |
| CYP2J2 phenotype (according to CYP2J*7) | ||
| Normal function | 66 (93.0) | 273 (86.9) |
| Reduced function | 5 (7.0) | 41 (13.1) |
| CYP2J2 A>T (rs11572325) | ||
| Wild type | 60 (84.5) | 242 (77.1) |
| Variant allele carrier | 11 (15.5) | 72 (22.9) |
| ABCG2 c.421C>A | ||
| Wild type | 55 (77.5) | 259 (82.5) |
| Variant allele carrier | 16 (22.5) | 55 (17.5) |
| ABCB1 c.1236C>T | ||
| Wild type | 24 (33.8) | 100 (31.8) |
| Variant allele carrier | 47 (66.2) | 214 (68.2) |
| ABCB1 2677G>T/A | ||
| Wild type | 28 (39.4) | 129 (41.1) |
| Variant allele carrier | 43 (60.6) | 185 (58.9) |
| ABCB1 3435C>T | ||
| Wild type | 19 (26.8) | 70 (22.3) |
| Variant allele carrier | 52 (73.2) | 244 (77.7) |
| ABCB1 2482-2236G>A | ||
| Wild type | 17 (23.9) | 92 (29.3) |
| Variant allele carrier | 54 (76.1) | 222 (70.7) |
| Variant | Raw Data OR (95% CrI) | Balanced Data OR (95% CrI) |
|---|---|---|
| CYP2J2 c.A>T variant allele vs. wild type | 0.80 (0.50–1.38) | 0.94 (0.55–1.65) |
| ABCG2 c.421C>A variant allele vs. wild type | 1.16 (0.70–1.88) | 1.25 (0.76–2.12) |
| ABCB1 c.1236C>T variant allele vs. wild type | 1.12 (0.70–1.75) | 1.05 (0.59–1.90) |
| ABCB1 c.2677G>T/A variant allele vs. wild type | 1.20 (0.76–1.95) | 1.35 (0.81–2.07) |
| ABCB1 c.3435C>T variant allele vs. wild type | 1.04 (0.76–1.88) | 0.85 (0.49–1.51) |
| ABCB1 c.rs4148738 variant allele vs. wild type | 1.20 (0.76–1.95) | 1.12 (0.66–2.01) |
| Study (Year) | N | Design | Main Variants | Key Finding | Consistency with Present Study |
|---|---|---|---|---|---|
| Wu et al. 2023 [12] | 95 | Prospective multicenter | CYP3A4/5, ABCB1, ABCG2 | No bleeding association | Yes |
| Wang et al. 2025 [18] | SR | Systematic review | 25 loci | Insufficient evidence for implementation | Yes |
| Li et al. 2024 [13] | 165 | Prospective | CYP3A4/5 | CYP3A4 variants associated with bleeding | Partial |
| Wang et al. 2025 [15] | 228 | Prospective PK research | ABCB1 c.3435C>T, c.1236C>T, c.2677G>T/A | c.3435 T/T: higher VTE risk | No |
| Kim et al. 2023 [14] | 293 | Case-control | ABCG2, ABCB1 | ABCG2 rs3114018, ABCB1 rs1045642 assoc. with bleeding | No |
| Campos-Staffico 2022 [19] | 2364 | Retrospective cohort | 8 PK variants ABCB1, ABCG2, CYP2J2, CYP3A4/5 | No PGx–DOAC bleeding association | Yes |
| Present study (2026) | 385 | Nested case-control | 10 SNPs (5 genes) | No PGx signal; age + GI comorbidity dominate | — |
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Slišković, A.M.; Trkulja, V.; Ganoci, L.; Božina, T.; Pašara, V.; Vrkić Kirhmajer, M.; Palić, J.; Strikić, D.; Narančić, M.; Sopek Merkaš, I.; et al. Pharmacogenomics of Rivaroxaban: Association of CYP3A4, CYP3A5, CYP2J2, ABCB1, and ABCG2 Variants with Bleeding and Thrombotic Outcomes in Real-World Clinical Practice. Pharmaceutics 2026, 18, 884. https://doi.org/10.3390/pharmaceutics18070884
Slišković AM, Trkulja V, Ganoci L, Božina T, Pašara V, Vrkić Kirhmajer M, Palić J, Strikić D, Narančić M, Sopek Merkaš I, et al. Pharmacogenomics of Rivaroxaban: Association of CYP3A4, CYP3A5, CYP2J2, ABCB1, and ABCG2 Variants with Bleeding and Thrombotic Outcomes in Real-World Clinical Practice. Pharmaceutics. 2026; 18(7):884. https://doi.org/10.3390/pharmaceutics18070884
Chicago/Turabian StyleSlišković, Ana Marija, Vladimir Trkulja, Lana Ganoci, Tamara Božina, Vedran Pašara, Majda Vrkić Kirhmajer, Jozefina Palić, Dominik Strikić, Marino Narančić, Ivana Sopek Merkaš, and et al. 2026. "Pharmacogenomics of Rivaroxaban: Association of CYP3A4, CYP3A5, CYP2J2, ABCB1, and ABCG2 Variants with Bleeding and Thrombotic Outcomes in Real-World Clinical Practice" Pharmaceutics 18, no. 7: 884. https://doi.org/10.3390/pharmaceutics18070884
APA StyleSlišković, A. M., Trkulja, V., Ganoci, L., Božina, T., Pašara, V., Vrkić Kirhmajer, M., Palić, J., Strikić, D., Narančić, M., Sopek Merkaš, I., Merćep, I., Bulum, J., & Šimičević, L. (2026). Pharmacogenomics of Rivaroxaban: Association of CYP3A4, CYP3A5, CYP2J2, ABCB1, and ABCG2 Variants with Bleeding and Thrombotic Outcomes in Real-World Clinical Practice. Pharmaceutics, 18(7), 884. https://doi.org/10.3390/pharmaceutics18070884

