Phytophthora Species from Xinjiang Wild Apple Forests in China
Abstract
:1. Introduction
2. Material and Methods
2.1. Study Area
2.2. Sampling and Phytophthora Isolation
2.3. Classical Identification of Isolates
2.4. Molecular Identification of Isolates
2.5. Phylogenetic Analysis
3. Results
3.1. Phytophthora Species Identification
3.2. Phylogenetic Analysis
3.3. The Distribution of Phytophthora Species
4. Discussion
5. Conclusions
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Clade | Species | Plot | Method | Number |
---|---|---|---|---|
clade1a | P. cactorum | BL | canopy drip | 1 |
clade2c | P. plurivora | BL | soil | 1 |
XY | soil | 2 | ||
XY | stream | 3 | ||
KE | stream | 5 | ||
clade6b | P. lacustris | BL | stream | 175 |
BL | canopy drip | 2 | ||
BL | soil | 4 | ||
XY | stream | 84 | ||
XY | canopy drip | 1 | ||
XY | soil | 1 | ||
KE | stream | 48 | ||
JQ | stream | 28 | ||
P. gonapodyides | BL | stream | 56 | |
XY | stream | 74 | ||
XY | canopy drip | 5 | ||
XY | soil | 3 | ||
KE | stream | 63 | ||
JQ | stream | 7 | ||
P. chlamydospora | BL | stream | 3 | |
XY | stream | 3 | ||
P. gregata | BL | stream | 2 | |
XY | stream | 4 | ||
XY | soil | 1 | ||
P. inundata | XY | stream | 1 | |
P. sp. CYP74 | BL | stream | 13 | |
XY | stream | 15 | ||
XY | canopy drip | 2 | ||
KE | stream | 3 | ||
JQ | stream | 2 | ||
P. sp. forestsoil-like | BL | stream | 3 | |
KE | stream | 2 | ||
JQ | stream | 3 | ||
clade9a | P. virginiana | BL | stream | 1 |
Species | Isolate No. | ITS Clade | Genbank Number |
---|---|---|---|
Phytophthora cactorum | 8BLL3 | 1 | MN175469 |
Phytophthora plurivora | 1KEX3(6) | 2 | MN175458 |
Phytophthora lacustris | 4GLX9(3) | 6 | MN175455 |
8KEX3(2) | 6 | MN175463 | |
Phytophthora gregata | 9XYX6(5) | 6 | MN175456 |
7XYT6(2) | 6 | MN175459 | |
Phytophthora gonapodyides | 9XYX7(2) | 6 | MN175457 |
2KEX5(5) | 6 | MN175462 | |
Phytophthora sp. CYP74 | 1KEX9(1) | 6 | MN175460 |
15XYX2(1) | 6 | MN175465 | |
Phytophthora chlamydospora | 9XYX5(4) | 6 | MN175461 |
5BLX9(2) | 6 | MN175466 | |
Phytophthora sp. forestsoil-like | 1BLX1(7) | 6 | MN175464 |
8JQX4(1) | 6 | MN175468 | |
Phytophthora inundata | 15XYX3(1) | 6 | MN209784 |
Phytophthora virginiana | 1BLX1(3) | 9 | MN175467 |
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Xu, X.; Huai, W.; Hamiti; Zhang, X.; Zhao, W. Phytophthora Species from Xinjiang Wild Apple Forests in China. Forests 2019, 10, 927. https://doi.org/10.3390/f10100927
Xu X, Huai W, Hamiti, Zhang X, Zhao W. Phytophthora Species from Xinjiang Wild Apple Forests in China. Forests. 2019; 10(10):927. https://doi.org/10.3390/f10100927
Chicago/Turabian StyleXu, Xiaoxue, Wenxia Huai, Hamiti, Xuechao Zhang, and Wenxia Zhao. 2019. "Phytophthora Species from Xinjiang Wild Apple Forests in China" Forests 10, no. 10: 927. https://doi.org/10.3390/f10100927