Application of Raman Spectroscopy to Rapid Discrimination of Autochthonous Lactic Acid Bacteria Isolated from Goat Cheese
Abstract
1. Introduction
2. Materials and Methods
2.1. Bacterial Stain and Growth Conditions
Differentiation of Species of the Genus Lactiplantibacillus
2.2. Raman Spectra of LAB Strains
2.3. Chemometric Methods
3. Results and Discussion
3.1. Identification of Lactiplantibacillus Strains
3.2. Raman Analysis and Bands Assignments for LAB Strains
3.2.1. Leuconostoc mesenteroides Strain
3.2.2. Lentilactobacillus parabuchneri Strains
| L. mesenteroides | L. parabuchneri | L. plantarum | Tentative Assignment | |||
|---|---|---|---|---|---|---|
| This Work | SERS [16] | This Work | FTIR [33] | This Work | Raman [15,19,21,22] | |
| 1653 | 1644 | 1660 | 1640 | 1655–1662 | 1662 | Amide I, Amide II (proteins) |
| 1553–1575 | 1582–1584 | Adenine (DNA), C=C stretching vibration (benzone rings) | ||||
| 1528 | 1529 | Asymmetric stretching (COO-) proteins | ||||
| 1512 | 1499 | Phe | ||||
| 1445 | 1465 | 1416 | 1455 | 1412–1453 | 1447–1454 | C-H bending (lipids) |
| 1335 | 1327 | 1305–1335 | 1321–1396 | Amide III (proteins) | ||
| 1238 | 1207–1247 | 1228–1236 | Amide III (proteins) | |||
| 1153 | 1163 | Stretching (C-C), | ||||
| 1087 | 1096 | 1081 | 1086 | 1080–1198 | 1077–1099 | PO2− in nucleic acid, or stretching (P-O), stretching (C-C), lipids, N-C stretching (phospholipids), proteins, or C-C skeletal and C-O-C stretching, glycosidic link (carbohydrates) |
| 974 | 956 | 980 | 970 | 976–993 | 958–1099 | Carbohydrates, C-COO stretching, stretching (C-O) and (C-N) of proteins, stretching (C-C), stretching (C-O), skeletal proteins, phenilalanine |
| 890 | 881 | 882 | 858–891 | 850–886 | stretching (C-O-C), stretching (C-C), polysaccharides; symmetric stretching (C-C-N), lipids, proline, hydroxiproline, tyrosine, pririmidine rings | |
| 779–784 | 729–785 | PO2− of DNA backbone, citocine, uracile, adenine, nucleic acids | ||||
| 665–678 | 667–696 | C-S stretching cysteine | ||||
| 533 | 522 | 540 | 532–369 | 554–604 | C-C stretching (carbohydrates), S-S stretching (proteins) | |
| 394 | 412 | Phosphate group or skeletal modes of CC, | ||||
| 355 | 396 | 405 | Phosphate group | |||
3.2.3. Lactiplantibacillus plantarum Strains
3.3. Spectral Biomarkers and Intracellular Composition
3.4. Principal Component Analysis of Raman Spectra
4. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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| Strains | Mass Spectrometry * | Molecular Identification * | Multiplex PCR Assay Based on recA gene Ұ |
|---|---|---|---|
| CB1 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB2 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB3 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB5 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB6 | Leuconostoc mesenteroides | Leuconostoc mesenteroides | |
| CB8 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB9 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB10 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB11 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB12 | Lentilactobacillus parabuchneri | Lentilactobacillus parabuchneri | |
| CB13 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB14 | Lentilactobacillus parabuchneri | Lentilactobacillus parabuchneri | |
| CB16 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| CB17 | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum/paraplantarum/pentosus | Lactiplantibacillus plantarum |
| Microorganisms | Strain | 976/1094 Ratio | 1094/890 Ratio | 976/890 Ratio |
|---|---|---|---|---|
| L. plantarum (Group 1) | CB2 | 1.9 | 1.4 | 2.4 |
| L. plantarum (Group 2) | CB8 | 5.7 | 0.6 | 3.8 |
| CB10 | 6.1 | 0.7 | 4 | |
| CB11 | 6 | 0.7 | 4.3 | |
| CB13 | 5 | 0.6 | 3 | |
| CB17 | 5.1 | 0.6 | 3.3 | |
| L. plantarum (Group 3) | CB1 | 0.6 | 4.9 | 3.2 |
| CB3 | 0.8 | 3.1 | 2.5 | |
| CB5 | 0.9 | 2.8 | 2.1 | |
| CB9 | 0.4 | 10 | 4.2 | |
| CB16 | 0.8 | 3.7 | 3 | |
| L. parabuchneri | CB12 | 4.5 | 0.8 | 4.5 |
| CB14 | 7.1 | 0.4 | 2.7 | |
| L. mesenteroids | CB6 | 4.5 | 0.6 | 2.7 |
| Microorganisms | CB2 | CB6 | CB9 |
|---|---|---|---|
| CB2 | 7 | 1 | 0 |
| CB6 | 1 | 7 | 0 |
| CB9 | 0 | 0 | 8 |
| Figure of Merit | Global | ||
|---|---|---|---|
| Accuracy | 91.7% | ||
| CB2 | CB6 | CB9 | |
| Sensitivity | 87.5% | 87.5% | 100% |
| Specificity | 93.8% | 93.8% | 87.5% |
| Efficiency | 90.6% | 90.6% | 93.5% |
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Bustos, A.Y.; Carol Paz, J.J.; Gómez, J.N.; Ledesma, A.E. Application of Raman Spectroscopy to Rapid Discrimination of Autochthonous Lactic Acid Bacteria Isolated from Goat Cheese. Curr. Issues Mol. Biol. 2026, 48, 497. https://doi.org/10.3390/cimb48050497
Bustos AY, Carol Paz JJ, Gómez JN, Ledesma AE. Application of Raman Spectroscopy to Rapid Discrimination of Autochthonous Lactic Acid Bacteria Isolated from Goat Cheese. Current Issues in Molecular Biology. 2026; 48(5):497. https://doi.org/10.3390/cimb48050497
Chicago/Turabian StyleBustos, Ana Yanina, Juan José Carol Paz, Jorge Nicolás Gómez, and Ana Estela Ledesma. 2026. "Application of Raman Spectroscopy to Rapid Discrimination of Autochthonous Lactic Acid Bacteria Isolated from Goat Cheese" Current Issues in Molecular Biology 48, no. 5: 497. https://doi.org/10.3390/cimb48050497
APA StyleBustos, A. Y., Carol Paz, J. J., Gómez, J. N., & Ledesma, A. E. (2026). Application of Raman Spectroscopy to Rapid Discrimination of Autochthonous Lactic Acid Bacteria Isolated from Goat Cheese. Current Issues in Molecular Biology, 48(5), 497. https://doi.org/10.3390/cimb48050497

