A Convolutional Neural Network-Based Intelligent Medical System with Sensors for Assistive Diagnosis and Decision-Making in Non-Small Cell Lung Cancer
Abstract
:1. Introduction
- Heavy physician burden. The number of patients is large while the number of doctors is small. As a result, doctors are overwhelmed by the repetition of inefficient and cumbersome diagnostic tasks, making it difficult to attend to all patients and delaying the diagnosis or treatment of some patients.
- Uneven geographical distribution of medical resources. While advanced medical resources are scarce and concentrated in large cities, most patients come from underdeveloped rural areas without better medical conditions or resources, which may delay their treatment, causing their condition to deteriorate.
- Overtreatment due to doctor misdiagnosis. The lack of advanced medical testing technology and excellent qualified doctors can easily lead to misdiagnosis. Not only does this result in the burden of additional physical treatment as well as high and unnecessary medical costs for the patient, but it also worsens the doctor–patient relationship.
- The development of a new CNN-based assisted diagnosis and decision-making intelligent medical system with sensors, which can diagnose the staging of NSCLC patients and provide recommend treatment strategies to physicians by extracting semantic features from the text of highly relevant diagnostic and decision parameters. The system can be used to help physicians assess the effectiveness of patient treatment and adjust the next stage of the treatment plan in a timely manner according to the patient’s recovery.
- The method of migrating the parameters of large-sample training models to small-sample training models using transfer learning techniques, which realizes the knowledge sharing and solves the impact on model performance caused by the problem of insufficient training samples.
- The dynamic sampling technique training algorithm is proposed to construct a balanced training set of positive and negative samples for iterative training to improve the accuracy and robustness of the auxiliary diagnosis model.
- The experimental data were all obtained from real-world NSCLC patient case samples recorded in three hospitals in China. The results show that our proposed new intelligent medical system can approach the diagnostic accuracy of NSCLC staging to the level of real doctors with good performance.
2. Related Work
3. System Design
3.1. Overall System Framework
3.2. NSCLC Staging Prediction Model
3.2.1. The Skip-Gram Word Vector Model
3.2.2. CNN Convolution Operation
3.3. Prediction Model for NSCLC Staging Based on Transfer Learning and Dynamic Sampling for Small Samples
Algorithm 1: The dynamic sampling technique training algorithm |
Input: is the multi-label data set. where is the total number of labels, NSCLC has four stages, so , the labels to be trained are , the number of iterations is and the size of the training data block for each iteration is . Output: The prediction model . Step 1: For any label , the co-occurrence frequency of the small sample pathological stage label and is calculated, as shown in Equation (4). Then, the parameters of the training model for the large sample case dataset are selected and saved according to the label corresponding to the maximum value, which is used as the initialization value for the small sample pathological period prediction model. where is a binary function that labels each case sample of NSCLC patients, and the labeling value is 1 if and have appeared in the same case sample, otherwise the labeling value is 0, as shown in Equation (5). The sampling probabilities of positive samples are regulized, where is the sum of all positive sample sampling probabilities, as shown in Equations (13) and (14). |
4. Experiments and Analysis
4.1. Diagnostic Data Parameters
4.2. Evaluate Performance
4.3. Decision-Making and Discussion
5. Conclusions
Author Contributions
Funding
Conflicts of Interest
References
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Type | Number |
---|---|
Patient information | 2,789,675 |
Outpatient service | 968,545 |
Doctors’ device in outpatient | 28,554,590 |
Hospitalized | 1,676,899 |
Diagnosis | 1,124,561 |
Electronic medical records | 5,287,413 |
Doctors’ device in clinical | 31,427,790 |
Inspection records | 179,712 |
Medical laboratory records | 9,483,216 |
Routine inspection records | 24,287,612 |
Operation records | 393,218 |
Drug records | 90,631 |
Parameter | CYFRA21-1 (μg/mL) | CEA (μg/L) | CA-125 (KU/L) |
---|---|---|---|
Range | 0–1.80 | 0–5.00 | 0–35.00 |
Parameter | NSE (μg/mL) | CA242 (KU/L) | PSA (μg/mL) | HGH (μg/mL) | Free-PSA (μg/mL) |
---|---|---|---|---|---|
Normal data area | 0–13.00 | 0–20.00 | 0–5.00 | 0–7.50 | 0–1.00 |
Stage Partition | Stage I | Stage II | Stage III | Stage IV |
---|---|---|---|---|
Range | 18–57 | 58–119 | 119–180 | >180 |
CYFRA21-1 (μg/mL) | CEA (μg/L) | CA-125 (KU/L) | NSE (μg/mL) | CA242 (KU/L) | PSA (μg/mL) | HGH (μg/mL) | Free-PSA (μg/mL) | FERRITIN (KU/L) |
---|---|---|---|---|---|---|---|---|
36.71 | 3.29 | 157.64 | 21 | 31 | 0.81 | 0.51 | 1.88 | 154.2 |
33.58 | 4.12 | 189.55 | 16 | 24 | 1.01 | 0.82 | 1.45 | 189.6 |
40.23 | 3.15 | 156.31 | 27 | 32 | 0.95 | 0.77 | 1.78 | 175.8 |
31.84 | 3.92 | 179.32 | 22 | 28 | 1.45 | 0.48 | 0.81 | 193.7 |
34.53 | 3.44 | 198.09 | 19 | 31 | 0.98 | 0.89 | 0.57 | 173.8 |
1.20 | 75.48 | 576.12 | 33 | 9 | 1.22 | 11.25 | 21.88 | 935.7 |
1.15 | 82.79 | 498.32 | 37 | 5 | 1.48 | 22.82 | 28.74 | 854.1 |
0.91 | 79.32 | 524.89 | 22 | 6 | 1.88 | 19.85 | 24.32 | 718.2 |
1.01 | 89.11 | 489.36 | 24 | 7 | 0.99 | 23.58 | 26.81 | 921.5 |
1.03 | 84.12 | 518.88 | 27 | 4 | 1.57 | 18.78 | 37.58 | 814.6 |
1.22 | 6.77 | 116.32 | 31 | 21 | 7.22 | 6.51 | 0.12 | 258.9 |
1.41 | 8.24 | 97.54 | 36 | 26 | 7.52 | 5.32 | 0.55 | 322.7 |
1.32 | 16.78 | 104.58 | 35 | 29 | 7.14 | 4.87 | 0.17 | 278.9 |
1.20 | 22.12 | 99.28 | 28 | 24 | 8.56 | 5.99 | 0.45 | 341.8 |
1.19 | 17.95 | 89.65 | 21 | 22 | 8.47 | 6.02 | 0.67 | 304.8 |
CYFRA21-1 (μg/mL) | CEA (μg/L) | CA-125 (KU/L) | NSE (μg/mL) | CA242 (KU/L) | PSA (μg/mL) | HGH (μg/mL) | Free-PSA (μg/mL) | FERRITIN (KU/L) | |
---|---|---|---|---|---|---|---|---|---|
1 | 4.16 | 285.41 | 711.01 | 34 | 8 | 1.12 | 10.25 | 58.81 | 835.7 |
2 | 5.57 | 277.99 | 688.81 | 36 | 5 | 1.42 | 11.21 | 49.71 | 754.1 |
3 | 3.55 | 257.15 | 521.42 | 27 | 6 | 1.86 | 12.15 | 48.22 | 738.2 |
4 | 4.28 | 231.44 | 461.56 | 25 | 6 | 1.29 | 11.20 | 47.55 | 622.1 |
5 | 3.47 | 184.88 | 408.18 | 36 | 5 | 1.54 | 15.71 | 38.51 | 422.6 |
6 | 4.84 | 128.11 | 321.88 | 27 | 7 | 1.68 | 13.88 | 35.12 | 351.8 |
7 | 5.17 | 62.89 | 295.10 | 38 | 6 | 1.71 | 12.51 | 11.6 | 211.1 |
8 | 3.89 | 21.17 | 178.20 | 21 | 5 | 1.55 | 13.61 | 7.1 | 209.7 |
Parameters | Description |
---|---|
layer 1 | word vector matrix |
layer 2 | convolutional layer with multi-scale kernels, 3 kernels, kernel size [3,4,5] |
layer 3 | 1-max pooling |
layer 4 | full connection with dropout = 0.5 and softmax output |
epoch size | 256 |
optimizer | stochastic gradient descent (SGD) |
k-fold | 10 |
Category | Sensitivity (%) | Specificity (%) | Accuracy (%) | AUC |
---|---|---|---|---|
Stage I | 92.04 | 91.34 | 92.20 | 0.93 |
Stage II | 93.20 | 92.30 | 94.17 | 0.94 |
Stage III | 94.60 | 95.85 | 97.50 | 0.97 |
Stage IV | 96.83 | 96.79 | 95.94 | 0.96 |
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Zhan, X.; Long, H.; Gou, F.; Duan, X.; Kong, G.; Wu, J. A Convolutional Neural Network-Based Intelligent Medical System with Sensors for Assistive Diagnosis and Decision-Making in Non-Small Cell Lung Cancer. Sensors 2021, 21, 7996. https://doi.org/10.3390/s21237996
Zhan X, Long H, Gou F, Duan X, Kong G, Wu J. A Convolutional Neural Network-Based Intelligent Medical System with Sensors for Assistive Diagnosis and Decision-Making in Non-Small Cell Lung Cancer. Sensors. 2021; 21(23):7996. https://doi.org/10.3390/s21237996
Chicago/Turabian StyleZhan, Xiangbing, Huiyun Long, Fangfang Gou, Xun Duan, Guangqian Kong, and Jia Wu. 2021. "A Convolutional Neural Network-Based Intelligent Medical System with Sensors for Assistive Diagnosis and Decision-Making in Non-Small Cell Lung Cancer" Sensors 21, no. 23: 7996. https://doi.org/10.3390/s21237996
APA StyleZhan, X., Long, H., Gou, F., Duan, X., Kong, G., & Wu, J. (2021). A Convolutional Neural Network-Based Intelligent Medical System with Sensors for Assistive Diagnosis and Decision-Making in Non-Small Cell Lung Cancer. Sensors, 21(23), 7996. https://doi.org/10.3390/s21237996