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3-(3,4-Dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole

1
Pharmaceutical Technology Transfer Center, Yaroslavl State Pedagogical University Named after K.D. Ushinsky, Yaroslavl 150000, Russia
2
Department of Organic Chemistry, Russian State University Named after A. N. Kosygin, Moscow 115035, Russia
3
Institute of Chemistry, Saint Petersburg State University, Saint Petersburg 199034, Russia
4
Pharmaceutical Chemistry and Centre of Excellence for Pharmaceutical Sciences, North-West University, Potchefstroom 2520, South Africa
*
Author to whom correspondence should be addressed.
Molbank 2023, 2023(1), M1552; https://doi.org/10.3390/M1552
Received: 12 December 2022 / Revised: 7 January 2023 / Accepted: 11 January 2023 / Published: 13 January 2023

Abstract

:
3-(3,4-Dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole was synthesized via the condensation of 3,4-dichlorobenzamidoxime and methyl 1H-indole-5-carboxylate using a superbasic medium (NaOH/DMSO). The compound was tested as a potential inhibitor of human monoamine oxidase (MAO) A and B. It demonstrated a notable inhibition with an IC50 value of 0.036 μM for the MAO-B and isoform specificity. The product was characterized by 1H-NMR, 13C-NMR, and HRMS. In conclusion, the new active MAO-B inhibitor may serve as a candidate for the future discovery of therapeutic agents for neurodegenerative disorders such as Parkinson’s disease.

1. Introduction

Parkinson’s disease (PD) is an age-related neurodegenerative disorder of the central nervous system (CNS), currently affecting over 8% of individuals aged 65 years and older worldwide. PD results in the chronic, irreversible, and progressive neuronal degradation of specific areas in the human brain and is caused by complex pathophysiological processes, including oxidative stress, neuro-inflammation, excitotoxicity, mitochondrial dysfunction, and proteolytic stress [1,2,3].
Monoamine oxidases (MAOs) are mitochondrial flavoenzymes that play a key role in the metabolism of monoaminergic neurotransmitters. The selective inhibition of MAO-B is a well-established approach in the treatment of PD [4,5,6]. For example, the irreversible MAO-B inhibitor, selegiline, and the reversible inhibitor, safinamide, have been approved for the treatment of PD [4,5,6] (Figure 1a).
Despite the diversity of MAO-B inhibitors that has been described in the literature, the discovery of novel inhibitors with good potencies and isoform specificities is still of interest. Recently, indole and indazole derivatives have been reported to be highly potent and specific MAO-B inhibitors (Figure 1b) [7]. However, the amide bond in the central fragment of these compounds may be metabolically labile and could lead to the rapid inactivation of future drugs in this class.
Our research group has reported a variety of new lead compounds for the discovery of isoform-specific MAO-B inhibitors such as imidazolines, benzenesulfonamides, and pyrazolo[1,5-a]quinoxalin-4-ones [8,9,10]. Based on our interest in the discovery of novel MAO-B inhibitors, in this work, we used our previously developed synthetic approach to synthesize a new indole-derivative where the amide functionality has been replaced by a bioisostere.
According to the data of the Swiss Institute of Bioinformatics, the central amide group of the molecule can be replaced without a loss of biological activity by the 1,2,4-oxadiazole heterocyclic fragment. This substitution should have a favorable effect on the in vivo metabolic stability of drug leads due to the greater stability of the fragments of five-membered heterocycles compared to the amide bond.
In addition, indole- and oxadiazole-based building blocks and their composition and complexes are popular chemical tools for the creation of new biologically active compounds with anti-infective [11], anticancer [12], cytoprotective activity [13], and other biological properties [14].
Thus, we hypothesize that the novel 1,2,4-oxadiazole/indole hybrid framework described below may appeal to scientists as a starting point for the new drug candidate development.

2. Results

2.1. Chemistry

3-(3,4-Dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole (4) was synthesized by the condensation of amidoxime 2 with carboxylic acid ester 3 in the superbasic medium (NaOH/DMSO) (Scheme 1), as described in our previous work [15]. The amidoxime 2 was synthesized from the corresponding nitrile 1, as described in the literature [16].

2.2. MAO Inhibition

The MAO inhibition potency of 3-(3,4-dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole was investigated using recombinant human MAO-A and MAO-B, following the same protocol as described for the previous investigation of 1,3,4-oxadiazol-2-ylbenzenesulfonamides [8]. The results of the MAO inhibition studies are presented in Table 1. Compound 4 inhibited MAO-B with an IC50 value of 0.036 μM, whereas a weak inhibition was recorded for MAO-A.

3. Discussion

This study reports the MAO inhibition potency of 3-(3,4-dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole (4). This compound inhibited MAO-B with an IC50 value of 0.036 μM, while the MAO-A isoform was inhibited with an IC50 value of 150 μM. The discovery of this active MAO-B inhibitor paves the way for the future discovery of potent MAO-B inhibitors among indole derivatives, which may find an application in the treatment of neurodegenerative disorders such as PD.

4. Materials and Methods

4.1. General

All the reagents and solvents were obtained from commercial sources and were used without purification. The reactions were monitored by analytical thin layer chromatography (TLC) using Silufol-254 plates. The visualization of the developed plates was performed by fluorescence quenching at 254 nm. 1H-NMR and 13C-NMR spectra were recorded on a Varian 400 Unity Plus instrument (400 MHz for 1H and 100 MHz for 13C, respectively). Chemical shifts (δ) are given in parts per million (ppm) and were referenced to the solvent signal for DMSO-d6 (2.50 for proton and 39.52 for carbon), while the coupling constants (J) are reported in hertz (Hz). Multiplicities are abbreviated as follows: s = singlet, d = doublet, dd = doublet of doublets, t = triplet, q = quartet, and m = multiplet. The melting points were determined on an Electrothermal IA 9300 series digital melting point apparatus. The mass spectra were recorded on microTOF spectrometers (ESI ionization).

4.2. Synthesis and Characterization of 3-(3,4-Dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole 4

To a solution of 3,4-dichlorobenzamidoxime 2 (0.0015 mol, 1 equiv.) and methyl 1H-indole-5-carboxylate 3 (0.0015 mol, 1 equiv.) in DMSO (1 mL), powdered NaOH (0.002 mol, 1.3 equiv.) was rapidly added. The reaction mixture was stirred at room temperature for the required time (TLC). The reaction mixture was diluted with cold water (30–50 mL). The resulting precipitate was collected by filtration, washed with water (30 mL), and air-dried at 50 °C. The yield was 0.391g, 79%, beige solid, mp 193–195 °C; 1H-NMR (400 MHz, DMSO) δ 11.64 (s, 1H), 8.45 (s, 1H), 8.21 (d, J = 2.1 Hz, 1H), 8.03 (dd, J = 8.4, 2.0 Hz, 1H), 7.91–7.82 (m, 2H), 7.62 (d, J = 8.5 Hz, 1H), 7.54 (d, J = 3.2 Hz, 1H), 6.66 (d, J = 3.2 Hz, 1H); 13C-NMR (101 MHz, DMSO) δ 178.05, 167.05, 139.17, 134.86, 132.79, 132.32, 129.32, 128.49, 127.74, 122.09, 121.25, 114.51, 113.17, 103.41; MS (ESI+): m/z [M + H]+. Anal. Calcd for C16H10Cl2N3O: 330.0196. Found: 330.0182. 1H-NMR, 13C-NMR of compound 4 are presented in Supplementary Materials.

4.3. Synthesis and Characterization of 3,4-Dichlorobenzamidoxime 2

To a suspension of 3,4-dichlorobenzonitrile (0.012 mol, 1 equiv.) and NH2OH·HCl (0.018 mol, 1.5 equiv.) in ethanol (15 ml), NaHCO3 (0.018 mol, 1.5 equiv.) was added. The reaction mixture was heated under reflux for 2 h (TLC). The solvent was subsequently evaporated under a reduced pressure, and the reaction mixture was diluted with cold water. The resulting precipitate was collected by filtration, washed with water (30 mL), and air-dried at 50 °C. The yield was 86%, white solid, mp 143–145 °C; 1H-NMR (400 MHz, DMSO) δ 9.87 (s, 1H), 7.89 (d, J = 1.9 Hz, 1H), 7.71–7.60 (m, 2H), 5.95 (s, 2H). [18]

4.4. MAO Inhibition Studies

The measurement of the IC50 values for the inhibition of human MAO-A and MAO-B was carried out according to the previously reported protocols [8,19]. Recombinant human MAO-A and MAO-B were obtained from Sigma-Aldrich (St. Louis, MO, USA) and the fluorescence measurements were rescored with a SpectraMax iD3 Multi-Mode microplate reader (Molecular Devices). The measurement of the MAO activity was based on the fluorescence signal generated when the substrate, kynuramine, is oxidized by the MAOs to yield 4-hydroxyquinoline.

Supplementary Materials

The following supporting information can be downloaded online, Copies of 1H- and 13C-NMR spectra.

Author Contributions

The conceptualization of the study was done by A.A.S. and S.V.B.; the formal analysis was done by S.V.B.; formal analysis and investigation—J.A.E. and A.P.; writing—original draft preparation was done by J.A.E.; writing—review and editing was done by A.A.S. and J.P.P. All authors have read and agreed to the published version of the manuscript.

Funding

Chemical part of this work was supported by the Russian Science Foundation (project 22-13-20085). MAO inhibition studies were funded by the National Research Foundation of South Africa [grant specific unique reference numbers (UID) 137997 (JPP) and 132168 (AP)].

Data Availability Statement

Not applicable.

Acknowledgments

The grant holders acknowledge that the opinions, findings, and conclusions or recommendations expressed in any publication which is NRF-supported are that of the authors, and that the NRF accepts no liability whatsoever in this regard.

Conflicts of Interest

The authors declare no competing interest.

Sample Availability

Samples of the compounds are available from the authors.

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Figure 1. (a) Structures of MAO-B-specific inhibitors; (b) the series of indole and indazole derived MAO inhibitors.
Figure 1. (a) Structures of MAO-B-specific inhibitors; (b) the series of indole and indazole derived MAO inhibitors.
Molbank 2023 m1552 g001
Scheme 1. Synthesis of 3,4-dichlorobenzamidoxime 2 and 3-(3,4-dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole 4.
Scheme 1. Synthesis of 3,4-dichlorobenzamidoxime 2 and 3-(3,4-dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole 4.
Molbank 2023 m1552 sch001
Table 1. The inhibition of human MAO-A and MAO-B by 3-(3,4-dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole 4.
Table 1. The inhibition of human MAO-A and MAO-B by 3-(3,4-dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole 4.
StructureIC50 (μM ± SD) 1
MAO-AMAO-B
Molbank 2023 m1552 i001150 ± 7.880.036 ± 0.012
Safinamide 2-0.048
Toloxatone 23.92-
1 The IC50 values are presented as the means ± standard deviation (SD) of triplicate measurements. 2 Reference inhibitors [17].
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MDPI and ACS Style

Efimova, J.A.; Shetnev, A.A.; Baykov, S.V.; Petzer, A.; Petzer, J.P. 3-(3,4-Dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole. Molbank 2023, 2023, M1552. https://doi.org/10.3390/M1552

AMA Style

Efimova JA, Shetnev AA, Baykov SV, Petzer A, Petzer JP. 3-(3,4-Dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole. Molbank. 2023; 2023(1):M1552. https://doi.org/10.3390/M1552

Chicago/Turabian Style

Efimova, Julia A., Anton A. Shetnev, Sergey V. Baykov, Anél Petzer, and Jacobus P. Petzer. 2023. "3-(3,4-Dichlorophenyl)-5-(1H-indol-5-yl)-1,2,4-oxadiazole" Molbank 2023, no. 1: M1552. https://doi.org/10.3390/M1552

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