Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential
Abstract
:1. Introduction
2. Results and Discussion
2.1. RdINV Overall Folding
2.2. RdINV N-Terminus Analysis
2.3. Complexes of RdINV Depict Its Active Site
2.4. Design of the Mutations and Study of Their Effect on RdINV Hydrolytic Activity
2.5. Impact of Mutations on RdINV Transfructosylating Productivity
3. Material and Methods
3.1. Organisms, Media, Growth and Mutagenesis
3.2. RdINV Expression and Purification
3.3. Hydrolase Activity and Kinetic Analysis
3.4. Transferase Activity, Fructooligosaccharides Production and HPLC Analysis
3.5. Crystallization and X-ray Structure Determination of RdINV
3.6. Automated Docking of 6-Kestose into D188A-RdINVΔ21–139
3.7. Differential Scanning Fluorimetry
4. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
References
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RdINV Mutant | Km (mM) | kcat (1/s) | kcat/Km (1/s mM) |
---|---|---|---|
WT | 5 ± 0.1 | 4751 ± 25 | 1011 ± 10 |
Q216L | 24 ± 1 | 2324 ± 13 | 98 ± 3 |
Q216T | 13 ± 1 | 11,496 ± 182 | 864 ± 39 |
A360Q | 15 ± 0.2 | 3814 ± 16 | 251 ± 21 |
N387T | 17 ± 0.8 | 583 ± 5 | 35 ± 1 |
A360Q/N387T | 14 ± 0.6 | 486 ± 4 | 34 ± 1 |
A213W | 47 ± 3 | 2716 ± 45 | 58 ± 3 |
A213W/Q216L | 88 ± 9 | 10,523 ± 329 | 120 ± 4 |
RdINVΔ21–139 | 9 ± 1 | 16,384 ± 216 | 1781 ± 16 |
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Jiménez-Ortega, E.; Narmontaite, E.; González-Pérez, B.; Plou, F.J.; Fernández-Lobato, M.; Sanz-Aparicio, J. Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential. Int. J. Mol. Sci. 2022, 23, 14981. https://doi.org/10.3390/ijms232314981
Jiménez-Ortega E, Narmontaite E, González-Pérez B, Plou FJ, Fernández-Lobato M, Sanz-Aparicio J. Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential. International Journal of Molecular Sciences. 2022; 23(23):14981. https://doi.org/10.3390/ijms232314981
Chicago/Turabian StyleJiménez-Ortega, Elena, Egle Narmontaite, Beatriz González-Pérez, Francisco J. Plou, María Fernández-Lobato, and Julia Sanz-Aparicio. 2022. "Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential" International Journal of Molecular Sciences 23, no. 23: 14981. https://doi.org/10.3390/ijms232314981