Is Remusatia (Araceae) Monophyletic? Evidence from Three Plastid Regions
Abstract
:1. Introduction
2. Results and Discussion
2.1. Results
2.2. Discussion
2.2.1. Is Remusatia Monophyletic?
2.2.2. Infrageneric Relationships Within Remusatia
| 1a. Spathe with two constrictions, one separating tube and limb, one separating limb into two parts | R. pumila |
| 1b. Spathe with only one constriction separating tube and limb | |
| 2a. Stonlons erect, simple, stout | R. vivipara |
| 2b. Stonlons creeping or pendulous, simple or branched, slender | |
| 3a. Limb of spathe semispreading to erect, not reflexed | R. hookeriana |
| 3b. Limb of spathe initially erect, later reflexed | R. yunnanensis |
3. Experimental Section
3.1. Taxon Sampling
3.2. DNA Extractions, Amplification, and Sequencing
3.3. Sequence Alignment and Phylogenetic Analyses
4. Conclusions
Supplementary Materials
ijms-13-00071-s001.pdfAcknowledgments
References
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| Aligned length (bp) | Number of variable sites (%) | Number of parsimony-informative sites (%) | Model selected by AIC | |
|---|---|---|---|---|
| rbcL gene | 1221 | 80 (6.6%) | 35 (2.9%) | HKY + I + G |
| trnL-F intergenic spacer | 936 | 85 (9.1%) | 45 (4.8%) | TVM + G |
| rps16 intron | 1014 | 160 (15.8%) | 73 (7.2%) | TIM + G |
| Plastid concatenated | 3171 | 325 (10.2%) | 153 (4.8%) |
| Taxon | Voucher | Locality | GenBank Accession No. | ||
|---|---|---|---|---|---|
| rbcL | trnL-F | rps16 | |||
| Ingroups | |||||
| Alocasia cucullata (Loureiro) G. Don | R. Li 56 | China: Yunnan, Xishuangbanna | JQ237188 | JQ237218 | JQ237158 |
| Alocasia odora (Roxburgh) K. Koch | R. Li 54 | China: Yunnan, Xishuangbanna | JQ237190 | JQ237220 | JQ237160 |
| Ariopsis peltata Nimmo | H. AR 602 | S India | JQ237191 | JQ237221 | JQ237161 |
| Ariopsis peltata Nimmo | s.n. | S India | JQ237192 | JQ237222 | JQ237162 |
| Arisaema bonatianum Engler | T.S. Yi 08006 | China: Yunnan, Gongshan | JQ237193 | JQ237223 | JQ237163 |
| Arisaema elephas Buchet | T.S. Yi 08008 | China: Yunnan, Baoshan | JQ237194 | JQ237224 | JQ237164 |
| Arisaema wattii J. D. Hooker | T.S. Yi 08011 | China: Yunnan, Gongshan | JQ237195 | JQ237225 | JQ237165 |
| Colocasia antiquorum Schott | T.S. Yi 08013 | China: Yunnan, Tengchong | JQ237199 | JQ237229 | JQ237169 |
| Colocasia antiquorum Schott | T.S. Yi 08014 | China: Yunnan, Yingjiang | JQ237200 | JQ237230 | JQ237170 |
| Colocasia esculenta (L.) Schott | R. Li 55 | China: Yunnan, Xishuangbanna, cultivated | JQ237189 | JQ237219 | JQ237159 |
| Colocasia esculenta (L.) Schott | R. Li 48 | China: Yunnan, Lvchun, cultivated | JQ237196 | JQ237226 | JQ237166 |
| Colocasia gigantea (Blume) J. D. Hooker | R. Li 66 | China: Yunnan, Lvchun | JQ237197 | JQ237227 | JQ237167 |
| Colocasia gigantea (Blume) J. D. Hooker | R. Li 69 | China: Yunnan, Jinping | JQ237198 | JQ237228 | JQ237168 |
| Pinellia cordata N. E. Brown | T.S. Yi 08015 | China: Fujian, Wuyishan | JQ237201 | JQ237231 | JQ237171 |
| Pinellia peltata C. Pei | T.S. Yi 08016 | China: Zhejiang, Wenzhou | JQ237202 | JQ237232 | JQ237172 |
| Ingroups | |||||
| Pinellia ternata (Thunb.) Tenore ex Breitenbach | T.S. Yi 08018 | China: Yunnan, Kunming | JQ237203 | JQ237233 | JQ237173 |
| Remusatia hookeriana Schott | Y.M. Chen 26 | China: Yunnan, Wuding | JQ237206 | JQ237236 | JQ237176 |
| Remusatia hookeriana Schott | R. Li 10 | China: Yunnan, Jinping | JQ237207 | JQ237237 | JQ237177 |
| Remusatia hookeriana Schott | R. Li 46 | China: Yunnan, Lvchun | JQ237208 | JQ237238 | JQ237178 |
| Remusatia pumila (D. Don) H. Li & A. Hay | R. Li 13 | China: Yunnan, Pingbian | JQ237209 | JQ237239 | JQ237179 |
| Remusatia pumila (D. Don) H. Li & A. Hay | R. Li 43 | China: Yunnan, Lvchun | JQ237210 | JQ237240 | JQ237180 |
| Remusatia vivipara (Roxb.) Schott | R. Li 12 | China: Yunnan, Jinping | JQ237211 | JQ237241 | JQ237181 |
| Remusatia vivipara (Roxb.) Schott | R. Li 44 | China: Yunnan, Lvchun | JQ237212 | JQ237242 | JQ237182 |
| Remusatia vivipara (Roxb.) Schott | s.n. | S India | JQ237213 | JQ237243 | JQ237183 |
| Remusatia yunnanensis (H. Li & A. Hay) H. Li & A. Hay | R. Li 11 | China: Yunnan, Yingjiang | JQ237214 | JQ237244 | JQ237184 |
| Remusatia yunnanensis (H. Li & A. Hay) H. Li & A. Hay | R. Li 45 | China: Yunnan, Yingjiang | JQ237215 | JQ237245 | JQ237185 |
| Steudnera colocasiifolia K. Koch | R. Li 14 | China: Yunnan, Puer | JQ237216 | JQ237246 | JQ237186 |
| Steudnera colocasiifolia K. Koch | R. Li 51 | China: Yunnan, Xishuangbanna | JQ237217 | JQ237247 | JQ237187 |
| Outgroups | |||||
| Pistia stratiotes L. | T.S. Yi 08020 | China: Yunnan, Kunming | JQ237204 | JQ237234 | JQ237174 |
| Protarum sechellarum Engl. | Bogner s.n. | Germany: Munich Botanical Garden, cultivated | JQ237205 | JQ237235 | JQ237175 |
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Li, R.; Yi, T.; Li, H. Is Remusatia (Araceae) Monophyletic? Evidence from Three Plastid Regions. Int. J. Mol. Sci. 2012, 13, 71-83. https://doi.org/10.3390/ijms13010071
Li R, Yi T, Li H. Is Remusatia (Araceae) Monophyletic? Evidence from Three Plastid Regions. International Journal of Molecular Sciences. 2012; 13(1):71-83. https://doi.org/10.3390/ijms13010071
Chicago/Turabian StyleLi, Rong, Tingshuang Yi, and Heng Li. 2012. "Is Remusatia (Araceae) Monophyletic? Evidence from Three Plastid Regions" International Journal of Molecular Sciences 13, no. 1: 71-83. https://doi.org/10.3390/ijms13010071
APA StyleLi, R., Yi, T., & Li, H. (2012). Is Remusatia (Araceae) Monophyletic? Evidence from Three Plastid Regions. International Journal of Molecular Sciences, 13(1), 71-83. https://doi.org/10.3390/ijms13010071
