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Article

Antimicrobial Natural Products from Plant Pathogenic Fungi

1
School of Chemical Sciences, University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
2
Bioluminescent Superbugs Lab, School of Medical Sciences, University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
3
Manaaki Whenua—Landcare Research, Private Bag 92170, Auckland 1142, New Zealand
4
Te Pūnaha Matatini Centre of Research Excellence in Complex Systems, Auckland 1142, New Zealand
*
Authors to whom correspondence should be addressed.
These authors contributed equally to this work.
Molecules 2023, 28(3), 1142; https://doi.org/10.3390/molecules28031142
Submission received: 14 December 2022 / Revised: 18 January 2023 / Accepted: 19 January 2023 / Published: 23 January 2023
(This article belongs to the Special Issue Microbial Natural Products 2022)

Abstract

:
Isolates of a variety of fungal plant pathogens (Alternaria radicina ICMP 5619, Cercospora beticola ICMP 15907, Dactylonectria macrodidyma ICMP 16789, D. torresensis ICMP 20542, Ilyonectria europaea ICMP 16794, and I. liriodendra ICMP 16795) were screened for antimicrobial activity against the human pathogenic bacteria Acinetobacter baumannii, Pseudomonas aeruginosa, Escherichia coli, Mycobacterium abscessus, and M. marinum and were found to have some activity. Investigation of the secondary metabolites of these fungal isolates led to the isolation of ten natural products (1–10) of which one was novel, (E)-4,7-dihydroxyoct-2-enoic acid (1). Structure elucidation of all natural products was achieved by a combination of NMR spectroscopy and mass spectrometry. We also investigated the antimicrobial activity of a number of the isolated natural products. While we did not find (E)-4,7-dihydroxyoct-2-enoic acid (1) to have any activity against the bacteria and fungi in our assays, we did find that cercosporin (7) exhibited potent activity against Methicillin resistant Staphylococcus aureus (MRSA), dehydro-curvularin (6) and radicicol (10) exhibited antimycobacterial activity against M. marinum, and brefeldin A (8) and radicicol (10) exhibited antifungal activity against Candida albicans. Investigation of the cytotoxicity and haemolytic activities of these natural products (6–8 and 10) found that only one of the four active compounds, radicicol (10), was non-cytotoxic and non-haemolytic.

Graphical Abstract

1. Introduction

Plant pathogenic fungi have evolved to invade and kill living plant tissue to derive nutrition and facilitate their reproduction. Entry of fungi into living plant tissue can be though natural openings such as leaf stomata [1] or using specialised fungal structures such as appressoria to punch holes though protective plant cell walls [2]. Once inside the plant cell, fungal pathogens must suppress or evade plant defensive responses typically though protein–protein interactions comprising fungal effectors and specific matching host plant resistant (R) proteins [3].
The role of secondary metabolites in this process is under explored but they can act as phytotoxins that enhance pathogenicity and virulence [4] and as mycotoxins that suppress endophytic and other competing phytopathogenic fungi [5]. In our ongoing investigation of the secondary metabolites of several necrotrophic plant pathogens from the International Collection of Microorganisms from Plants (ICMP), namely, Alternaria radicina, Cercospora beticola, Dactylonectria macrodidyma, D. torresensis, Ilyonectria europaea, and I. liriodendra, we isolated natural products 1–10, one of which was novel. Herein, we report the fermentation, isolation, and biological activities of these natural products.

2. Results

We screened several plant pathogens from the ICMP collection for antimicrobial activity against bioluminescent derivatives of Acinetobacter baumannii, Pseudomonas aeruginosa, Escherichia coli, Mycobacterium abscessus, and M. marinum. Antibacterial activity was measured as log reductions in light output compared to no-fungi controls and are presented as activity scores. Scores above 1 correspond to a >90% reduction in bacterial bioluminescence compared to the corresponding no-fungi control. Similarly, an activity score above 2 corresponds to a >99% reduction. ICMPs 5619, 15907, 16789, 16794, 16795, and 20542 were identified as hits against both M. abscessus with ICMPs 5619, 16794, and 16795 also exhibiting activity against M. marinum (Figure 1). In addition, ICMP 5619 was also found to be active against E. coli. Thus, the fungal isolates Alternaria radicina ICMP 5619, Cercospora beticola ICMP 15907, Dactylonectria macrodidyma ICMP 16789, D. torresensis ICMP 20542, Ilyonectria europaea ICMP 16794, and I. liriodendra ICMP 16795 were selected for further investigation.
ICMP 5619, 15907, 16789, 16794, 16795, and 20542 were incubated and grown on potato dextrose agar (PDA) plates and extracted with a combination of methanol and dichloromethane to afford crude extracts. The crude extracts were subjected to extensive chromatographic methods for purification including C8 reversed-phase column chromatography (H2O/MeOH), Sephadex LH-20 (MeOH/5% CH2Cl2) and Diol-bonded silica gel (hexane/EtOAc) chromatography to afford compounds 1–10 (Figure 2 and Table 1).
High resolution ESIMS of 1, isolated from Alternaria radicina ICMP 5619, showed the presence of a sodiated adduct at m/z 197.0784 corresponding to a molecular formula of C8H14O4. Analysis of the proton NMR spectrum of 1 in MeOD (Figure S1) showed the presence of two olefinic protons (δH 6.87 (dd, J = 15.6, 6.3 Hz, H-3) and 5.90 (dd, J = 15.6, 1.4 Hz, H-2)), two oxygenated methines (δH 5.04 (m, H-7) and 4.12 (m, H-4)), two sets of diastereotopic methylenes (δH 1.80 (m, H-5a), 1.71 (m, H-5b, H-6a), and 1.60 (m, H-6b)) and a methyl group (δH 1.25 (d, J = 6.5 Hz, H3-8). The carbon NMR spectrum (Figure S2) showed eight carbon signals including a carbonyl carbon (δC 167.3 (C-1)), two olefinic carbons (δC 151.0 (C-3) and 122.7 (C-2)), two oxygenated methines (δC 71.4 (C-4/C-7) and 71.3 (C-4/C-7)), two methylenes (δC 31.8 (C-5) and 29.5 (C-6)), and a methyl carbon (δC 18.9 (C-8)). COSY cross correlations (Figure S3) established the connectivity order across the oct-2-enyl chain with the two olefinic protons being attributed to an E-alkene due to the relatively large JHH coupling constant of 15.6 Hz. HBMC correlations (Figure S5) observed between H3-8 and C-6, H2-5 and C-7, H-3 and both C-5 and C-1 and between H-2 and C-4 provided further evidence of connectivity (Figure 3). Thus, the structure of compound 1 was established as (E)-4,7-dihydroxyoct-2-enoic acid. The stereochemistry at C-4 and C-7 for 1 could not be assigned as 1 was optically inactive and showed no absorption curves in the electronic circular dichroism experiment.
Structure elucidation of compounds 1–10 was achieved by a combination of NMR spectroscopy and mass spectrometry, which was in agreement with the literature [6,7,8,9,10,11,12]. In addition to 1, Alternaria radicina ICMP 5619 also afforded compounds 2–6, which were identified as radicinin (2) [13], terpestacin (3) [14], tetrahydropyrenophorin (4) [15], curvularin (5) [16] and dehydro-curvularin (6) [17]. Compound 7, isolated from Cercospora beticola ICMP 15907 was identified as cercosporin (7) [18] while compound 8, isolated from both D. macrodidyma ICMP 16789 and D. torresensis ICMP 20542, was identified as brefeldin A (8) [19] with the latter also producing brefeldin C (9) [20]. Both I. europaea ICMP 16794 and I. liriodendra ICMP 16795 afforded compound 10, which was identified as radicicol (10) [21].
All compounds except for 9, due to insufficient sample, were evaluated for their antimicrobial activity against a panel of bacterial (A. baumannii, E. coli, Klebsiella pneumoniae, Methicillin-resistant Staphylococcus aureus (MRSA), and P. aeruginosa) and fungal (Candida albicans and Cryptococcus neoformans) pathogens (Table 1). Of all the compounds tested, cercosporin (7) was the most active against the bacterial strains with a MIC of ≤0.47 µM against MRSA. Intriguingly, the activity of ICMP 5619 we observed against E coli during initial screening was lost after purification, not an uncommon occurrence. Of note was the moderate antifungal activity exhibited by brefeldin A (8) and radicicol (10) against C. albicans with minimum inhibitory concentrations (MICs) of 57 and 44 µM, respectively. Neither of these compounds exhibited significant activity against any of the bacterial strains.
All compounds were also evaluated for their cytotoxicity against human embryonic kidney cells (HEK-293) and any haemolytic activity against human red blood cells. Compounds 6–8 were found to be cytotoxic with 50% cytotoxic concentrations (CC50) of 1.27, 25.33, and 0.89 µM, respectively. Compound 10 was non-cytotoxic and non-haemolytic.
The antimycobacterial activity of compounds 1, 2, and 4–10 was also investigated using bioluminescent strains of M. abscessus and M. marinum (Figure 4). Compound 3 was not investigated due to the lack of sample. In contrast to the observed antimycobacterial activity observed in the initial screening, none of the tested compounds showed activity against M. abscessus or M. marinum except for dehydro-curvularin (6) and radicicol (10), which showed activity against M. marinum (MIC of 32 and 64 μg/mL, respectively).

3. Discussion

Secondary metabolites from the fungal plant pathogens Alternaria radicina, Cercospora beticola, D. macrodidyma, D. torresensis, I. europaea, and I. liriodendra have been reported to exhibit a variety of bioactivities including antimicrobial, anti-proliferative, antimalarial, and phytotoxic activities and as inhibitors of acetylcholinesterase [22,23,24,25,26,27,28,29,30,31,32,33,34].
In this study, we isolated ten natural products from these fungi including the novel compound (E)-4,7-dihydroxyoct-2-enoic acid (1), and the known compounds radicinin (2) [13], terpestacin (3) [14], tetrahydropyrenophorin (4) [15], curvularin (5) [16], dehydro-curvularin (6) [17], cercosporin (7) [18], brefeldin A (8) [19], brefeldin C (9) [20] and radicicol (10) [21].
The antimicrobial activities of radicinin (2), tetrahydropyrenophorin (4), curvularin (5), dehydro-curvularin (6), brefeldin A (8), and radicicol (10) have previously been reported (Table 2). Radicinin (2) has been shown to exhibit moderate antifungal activity against Elymus repens and Mycotypha microspora [35] while tetrahydropyrenophorin (4) has been shown to exhibit moderate antibacterial activity against E. coli and Bacillus megaterium as well as antifungal activity against Microbotryum violaceum [36]. Interestingly, we could not replicate this anti-E. coli activity in the present study. This could be because of the differences in the methods used to measure antibacterial activity where Zhang et al. used an agar diffusion assay with an unspecified bacterial inoculum sprayed onto the agar plates [36] while we performed our assays in a liquid medium. It is well-known that factors such as inoculum size [37] can impact on the results of antimicrobial activity testing, so this may be the reason for the discrepancy. Betina and Mičeková [38] previously investigated the antimicrobial activities of 5, 8, and 10 against E. coli, Bacillus subtilis, C. albicans, Saccharomyces cerevisiae, and Botrytis cinerea in disk diffusion assays and found that none of the compounds were active against E. coli and only 10 was active against B. subtilis. Our findings agree with this. In addition, 8 has also been reported to exhibit activity against Aspergillus fumigatus and Microsporum gypseum while 10 has been reported to have activity against Aspergillus flavus [38,39,40]. Investigation of the antimicrobial activities of 5 and 6 against B. subtilis, S. aureus, S. cerevisiae, Sclerotinia sclerotiorum, and Mycobacteria tuberculosis showed that both compounds were inactive against all strains with the exception of 6, which was active against M. tuberculosis (MIC 40 μM) [9,26].
We tested the novel compound (E)-4,7-dihydroxyoct-2-enoic acid (1) from Alternaria radicina ICMP 5619 and while we found it to have no cytotoxic or haemolytic activity, it also possessed no antimicrobial activity against the bacterial and fungal strains we used. Of the other known natural products isolated, we found that compound 7 exhibited potent activity against MRSA and 6 and 10 had activity against M. marinum. This last finding is in keeping with the findings of Souza et al., who determined that compound 6 was active against another Mycobacterium species, M. tuberculosis [26]. Meanwhile, compounds 8 and 10 exhibited moderate antifungal activity against C. albicans. Unfortunately, compounds 6–8 were found to be cytotoxic but not haemolytic, while 10 exhibited no cytotoxicity or haemolytic activity.
Table 2. Summary of natural products 1–10 isolated from fungal pathogens.
Table 2. Summary of natural products 1–10 isolated from fungal pathogens.
FungusICMPCompounds IsolatedBioactivityReferences
Alternaria radicina5619(E)-4,7-dihydroxyoct-2-enoic acid (1)None
Radicinin (2)Phytotoxic
Antifungal
Anti-proliferative Acetylcholinesterase inhibitor
[27,30,32,33,35]
Terpestacin (3)Anti-proliferative[41]
Tetrahydropyrenophorin (4)Antibacterial
Antifungal
Algicidal
[36]
Curvularin (5)Phytotoxic[9,23,26,38,42]
Dehydrocurvularin (6)Antifungal
Phytotoxic
Antimycobacterial
[9,23,26,42]
Cercospora beticola15907Cercosporin (7)Photo-activated plant toxin[22,43]
Dactylonectria macrodidyma16789Brefeldin A (8)
(also known as Decumbin, Cyanein,
Ascotoxin,
Nectrolide,
Synergisidin)
Anti-proliferative
Antifungal
[19,38,44,45,46]
Brefeldin C (9) [20]
Dactylonectria torresensis20542Brefeldin A (8)Anti-proliferative[19,38,44,45,46]
Ilyonectria
europaea
16794Radicicol (10)
(also known as Monorden)
HSP90 inhibitor
Antifungal
Antimalarial
[24,25,34,39,47]
Ilyonectria
liriodendra
16795Radicicol (10)HSP90 inhibitor
Antifungal
Antimalarial
[24,25,34,39,47]

4. Materials and Methods

4.1. General Experimental Procedures

Mass spectra were acquired on a Bruker micrOTOF Q II spectrometer. Specific rotations were recorded on an Autopol IV polarimeter using a 1 dm cell (concentration units of g/100 mL). Melting points were recorded on an electrothermal melting point apparatus and were uncorrected. Electronic circular dichroism readings were obtained with a Chirascan circular dichroism spectrometer using a 1 mm cuvette (concentration units of molL−1). 1H and 13C NMR spectra were recorded at 298 K on a Bruker AVANCE 400 spectrometer at 400 and 100 MHz, respectively, using standard pulse sequences. Proto-deutero solvent signals were used as internal references (CD3OD: δH 3.31, δC 49.0; (CD3)2CO: δH 2.04, δC 29.8; CDCl3: δH 0.00 (TMS), δC 77.16). For 1H NMR, the data are quoted as position (δ), relative integral, multiplicity (s = singlet, d = doublet, t = triplet, q = quartet, p = pentet, m = multiplet, dd = doublet of doublets, ddd = doublet of doublets of doublets, dt = doublet of triplets, dq, = doublet of quartets, br = broad), coupling constant (J, Hz), and assignment to the atom. The 13C NMR data are quoted as position (δ) and assignment to the atom. Flash column chromatography was carried out using Kieselgel silica gel (40–63 μm) or Merck diol bonded silica (40–63 μm), C8 (Merck) reversed-phase (40–63 μm) solid support. Gel filtration flash chromatography was carried out on Sephadex LH–20 (Pharmacia). Thin layer chromatography was conducted on DC–plastikfolien Kieselgel 60 F254 plates. All solvents used were of analytical grade or better and/or purified according to the standard procedures.

4.2. Fungal Material

Fungal isolates of Alternaria radicina, Cercospora beticola, Dactylonectria macrodidyma, D. torresensis, Ilyonectria europaea, and I. liriodendra were acquired from Manaaki Whenua—Landcare Research’s International Collection of Microorganisms from Plants (ICMP).

4.2.1. ICMP 5619—Alternaria radicina

A. radicina is a pathogen of carrot (Daucus carota) causing the disease ‘black rot’. It is a globally common fungus associated with carrot production [48]. Culture ICMP 5619 was isolated in February 1969 from a diseased carrot in Ohakune, the major carrot growing region of New Zealand. The identification of this culture is supported by GenBank sequence MW862781 [49].

4.2.2. ICMP 15907—Cercospora beticola

C. beticola is described as a leaf spot pathogen of sugar beet (Beta vulgaris), however, it has been recorded on eight different hosts in New Zealand [50]. Culture ICMP 15907 was isolated in April 2005 from lupin (Lupinus polyphyllus) in Auckland, New Zealand. The identification of this culture is supported by GenBank sequences OP390248, OP382645, OP382665, OP382685, and OP382702 [51].

4.2.3. ICMP 16789—Dactylonectria macrodidyma

D. macrodidyma is a plant pathogen affecting the roots of grape vines causing the disease ‘black foot’, and it is occasionally isolated from other plants. It is found to be associated with grapevines in Australia, Europe, New Zealand, South Africa, and the USA [52]. Culture ICMP 16789 was isolated in May 2005 from a dead grapevine in Gisborne, New Zealand. The identification of this culture is supported by GenBank sequence MH553533 [53].

4.2.4. ICMP 20542—Dactylonectria torresensis

D. torresensis is a plant root pathogen causing disease on a wide variety of hosts worldwide [54]. Culture ICMP 20542 was isolated in March 2005 from a grapevine root in Waipara, New Zealand. The identification of this culture is supported by GenBank sequences MW862792 and MZ393468 [55].

4.2.5. ICMP 16794—Ilyonectria europaea

I. europaea is a plant root pathogen. It is widely distributed in Europe on several different plant species. In New Zealand, it has been found on grapevine and apple. Culture ICMP 16794 was isolated in March 2005 from a grapevine root in Waipara, New Zealand. The identification of this culture is supported by GenBank sequences MH497571 and MH553543 [56].

4.2.6. ICMP 16795—Ilyonectria liriodendri

I. liriodendri is a significant root disease of grapevines both in New Zealand and worldwide [57]. Culture ICMP 16795 was isolated in March 2005 from a grapevine root in Waipara, New Zealand. The identification of this culture is supported by GenBank sequences MW862788 and MZ393467 [58].

4.3. Fermentation, Extraction and Isolation

4.3.1. ICMP 5619—Alternaria radicina

Forty PDA plates were inoculated with ICMP 5619 and incubated at room temperature for 3 weeks. Fully grown fungal plates were freeze-dried (20.42 g, dry weight) and extracted with MeOH (2 × 500 mL) for 4 h followed by CH2Cl2 (500 mL) overnight. Combined organic extracts were concentrated under reduced pressure to afford a brown oil (2.05 g). The crude product was subjected to purification by C8 reversed-phase column chromatography eluted with a gradient of H2O/MeOH to afford five fractions (F1–F5). Purification of Fraction F3 by silica gel column chromatography, eluted with n-hexane/EtOAc (1:1), afforded four fractions (D1–D4). Fraction D3 was triturated with water to afford radicinin (2) as a white solid (2.50 mg), while the eluent afforded (E)-4,7-dihydroxyoct-2-enoic acid (1) as a yellow oil (2.0 mg). Fraction F4 was subjected to purification by silica gel column chromatography and eluted with CH2Cl2/MeOH (gradient) to afford our fractions (A1–A4). Purification of A1 by silica gel column chromatography, eluted with n-hexane/EtOAc (1:1), afforded four fractions (B1–B4). Fraction B1 afforded dehydro-curvularin (6) as a yellow solid (50.2 mg) while B2 afforded curvularin (5) as a white solid (35.6 mg). Fraction B3 was subjected to Sephadex LH-20, eluted with MeOH to afford three fractions (C1–C3). Subsequent purification of C1 by diol-bonded silica gel column chromatography, eluted with EtOAc/PetEther (gradient), afforded tetrahydropyrenophorin (4) (5.5 mg) and terpestacin (3) (1.2 mg).

(E)-4,7-Dihydroxyoct-2-enoic acid (1)

[α]D19 = −5.9 (c = 0.27, MeOH); 1H NMR (CD3OD, 400 MHz) δ 6.87 (1H, dd, J = 15.6, 6.3 Hz, H-3), 5.90 (1H, dd, J = 15.6, 1.4 Hz, H-2), 5.04 (1H, m, H-7), 4.12 (1H, m, H-4), 1.80 (1H, m, H-5a), 1.71 (2H, m, H-5b, H-6a), 1.60 (1H, m, H-6b), 1.25 (3H, d, J = 6.5 Hz, H3-8); 13C NMR (CD3OD, 100 MHz) δ 167.3 (C-1), 151.0 (C-3), 122.7 (C-2), 71.4 (C-4/C-7), 71.3 (C-4/C-7), 31.8 (C-5), 29.5 (C-6), 18.9 (C-8); (+)-HRESIMS m/z 197.0784 [M + Na]+ (calcd for C8H14NaO4, 197.0784).

Radicinin (2)

[α]D20 = −43.1 (c = 0.35, CHCl3/EtOH 2:1) [lit [α]D22 = −125 (c = 1.26, CHCl3/EtOH 2:1) [59]]; 1H NMR (CDCl3, 400 MHz) δ 6.98 (1H, dq, J = 15.5, 7.0 Hz, H-10), 6.04 (1H, dq, J = 15.5, 1.5 Hz, H-9), 5.85 (1H, s, H-8), 4.36 (1H, dq, J = 12.5, 6.1 Hz, H-2), 3.99 (1H, d, J = 12.5 Hz, H-3), 3.84 (1H, br s, OH), 1.97 (1H, dd, J = 7.0, 1.5 Hz, H-11), 1.66 (1H, d, J = 6.1 Hz, H-12); (+)-HRESIMS m/z 259.0590 [M + Na]+ (calcd for C12H12NaO5, 259.0582).

Terpestacin (3)

[α]D22 = −7.3 (c = 0.21, MeOH) [lit [α]D = −18 (c = 0.1, MeOH) [60]]; 1H NMR (CDCl3, 400 MHz) δ 5.41–5.39 (1H, m, H-13), 5.26–5.23 (1H, m, H-3), 5.15–5.13 (1H, m, H-7), 4.06 (1H, dd, J = 9.8, 3.8 Hz, H-11), 3.89 (1H, dd, J = 10.4, 7.3 Hz, H2-23a), 3.82 (1H, dd, J = 10.4, 7.3 Hz, H2-23b), 2.71 (1H, dd, J = 11.5, 2.5 Hz, H-14a), 2.68–2.65 (1H, m, H-22), 2.47–2.42 (1H, m, H2-14a), 2.39 (1H, dd, J = 13.8, 10.5 Hz, H2-2a), 2.29–2.24 (2H, m, H2-5a, H2-6a), 2.23–2.19 (1H, m, H2-9a), 2.13–2.07 (1H, m, H2-6b), 2.05–2.00 (2H, m, H2-5b, H2-9b), 1.98–1.91 (1H, m, H2-14b), 1.80–1.73 (2H, m, H2-10), 1.72–1.67 (1H, m, H2-2b), 1.64 (6H, br s, H3-18, H3-19), 1.57 (3H, s, H3-20), 1.29 (3H, d, J = 7.3 Hz, H3-21), 1.00 (3H, s, H3-17); HRESIMS m/z 425.2663 [M + Na]+ (calcd for C25H38NaO4, 425.2662).

Tetrahydropyrenophorin (4)

[α]D22 = −11.0 (c = 0.10, CHCl3) [lit [α]D20 = −11.0 (c = 0.21, CHCl3) [36]]; 1H NMR (CDCl3, 400 MHz) δ 6.77 (1H, dd, J = 16.0, 6.5 Hz, H-3′), 5.89 (1H, dd, J = 16.0, 1.0 Hz, H-2′), 4.94–4.87 (2H, m, H-7, H-7′), 4.30–4.26 (1H, m, H-4′), 2.90–2.83 (1H, m, H-3a), 2.77–2.68 (1H, m, H-2a), 2.63 (1H, dd, J = 8.3, 3.2 Hz, H-5a), 2.52 (1H, dd, J = 8.6, 3.2 Hz, H-5b), 2.51–2.47 (1H, m, H-3b), 2.41–2.38 (1H, m, H-2b), 2.17–2.10 (1H, m, H-6), 1.83–1.78 (1H, m, H-5′a), 1.78–1.75 (1H, m, H-5′b), 1.70–1.66 (1H, m, H-6′a), 1.61–1.57 (1H, m, H-6′b), 1.28 (3H, d, J = 5.8 Hz, H3-8), 1.22 (3H, d, J = 6.3 Hz, H3-8′); 13C NMR (CDCl3, 100 MHz) δ 207.8 (C-4), 172.4 (C-1), 165.9 (C-1′), 149.3 (C-3′), 122.7 (C-2′), 71.9 (C-7), 71.3 (C-4′), 70.3 (C-7′), 39.3 (C-5), 37.5 (C-3), 30.1 (C-5′), 29.9 (C-6′), 28.9 (C-6), 28.7 (C-2), 20.5 (C-8), 18.9 (C-8′); (+)-HRESIMS m/z 335.1473 [M + Na]+ (calcd for C16H24NaO6, 335.1471).

Curvularin (5)

[α]D22 = −30 (c = 0.1, MeOH) [lit [α]D20 = −44.9 (c = 1.0, MeOH) [61]]; 1H NMR ((CD3)2CO, 400 MHz) δ 6.39 (1H, d, J = 2.4 Hz, H-4), 6.34 (1H, d, J = 2.4 Hz, H-6), 4.92 (1H, m, H-15), 3.78 (1H, d, J = 16.0 Hz, H-2a), 3.70 (1H, d, J = 16.0 Hz, H-2b), 3.11 (1H, ddd, J = 15.5, 8.4, 2.9 Hz, H-10a), 2.77 (1H, ddd, J = 15.5, 8.4, 2.9 Hz, H-10b), 1.74 (1H, m, H-11a), 1.59 (2H, m, H-14a), 1.51 (1H, m, H-11b), 1.46 (1H, m, H-13a), 1.43 (1H, m, H-14b), 1.41 (1H, m, H-12a), 1.31 (1H, m, H-13b), 1.27 (1H, m, H-12b), 1.11 (3H, d, J = 6.2 Hz, H3-16); 13C NMR ((CD3)2CO, 100 MHz) δ 206.7 (C-9), 171.0 (C-1), 160.2 (C-5), 158.2 (C-7), 136.9 (C-3), 121.6 (C-8), 112.2 (C-4), 102.5 (C-6), 72.6 (C-15), 44.0 (C-10), 39.7 (C-2), 33.0 (C-14), 27.6 (C-12), 24.6 (C-13), 23.5 (C-11), 20.6 (C-16); (+)-HRESIMS m/z 315.1203 [M + Na]+ (calcd for C16H20NaO5, 315.1203).

Dehydro-curvularin (6)

[α]D22 = −48 (c = 0.1, MeOH) [lit [α]D20 = −64.9 (c = 1.0, MeOH) [61]]; 1H NMR ((CD3)2CO, 400 MHz) δ 6.78 (1H, d, J = 15.5 Hz, H-10), 6.57 (1H, ddd, J = 15.5, 8.9, 4.7 Hz, H-11), 6.36 (1H, d, J = 2.4 Hz, H-4), 6.31 (1H, d, J = 2.4 Hz, H-6), 4.74 (1H, m, H-15), 4.08 (1H, d, J = 18.1 Hz, H-2a), 3.61 (1H, d, J = 18.1 Hz, H-2b), 2.42 (1H, m, H-12a), 2.35 (1H, m, H-12b), 2.00 (1H, m, H-13a), 1.86 (1H, m, H-14a), 1.66 (1H, m, H-13b), 1.62 (1H, m, H-14b), 1.20 (3H, d, J = 6.4 Hz, H3-16); 13C NMR ((CD3)2CO, 100 MHz) δ 197.1 (C-9), 171.8 (C-1), 165.9 (C-7), 163.3 (C-5), 149.5 (C-11), 139.4 (C-3), 132.6 (C-10), 115.5 (C-8), 113.8 (C-4), 102.9 (C-6), 72.8 (C-15), 43.7 (C-2), 34.7 (C-14), 33.1 (C-12), 24.9 (C-13), 20.3 (C-16); (+)-HRESIMS m/z 313.1048 [M + Na]+ (calcd for C16H18NaO5, 313.1046).

4.3.2. ICMP 15907—Cercospora beticola

Eight PDA plates were inoculated with ICMP 15907 and incubated at room temperature for 4 weeks. Fully grown fungal plates were freeze-dried (4.62 g, dry weight) and extracted with MeOH (2 × 200 mL) for 4 h followed by CH2Cl2 (200 mL) overnight. Combined organic extracts were concentrated under reduced pressure to afford a brown oil (0.543 g). The crude product was subjected to purification by C8 reversed-phase column chromatography eluted with a gradient of H2O/MeOH to afford six fractions (F1–F6). F4 was subjected to purification by diol-bonded silica gel column chromatography, eluted with CH2Cl2/MeOH (gradient) to afford cercosporin (7) as a solid (20.4 mg).

Cercosporin (7)

[α]D19 = + 256.5 (c = 0.03, CHCl3) [lit [α]D20 = + 470 (c = 0.50, CHCl3) [18]]; 1H NMR (CDCl3, 400 MHz) δ 14.82 (2H, s, OH-4), 7.07 (2H, s, H-7), 5.74 (2H, s, H-13), 4.21 (6H, s, H-12), 3.59 (2H, dd, J = 12.9, 6.4 Hz, H-10), 3.39 (2H, m, H-9a), 2.90 (2H, dd, J = 12.9, 5.9 Hz, H-9b), 0.64 (6H, d, J = 6.4 Hz, H3-11); 13C NMR (CDCl3, 100 MHz) δ 181.9 (C-5), 167.6 (C-4), 163.5 (C-2), 152.9 (C-6), 135.4 (C-7), 130.7 (C-8), 128.1 (C-8a), 113.1 (C-1), 109.5 (C-3), 108.4 (C-4a), 92.8 (C-13), 68.2 (C-10), 61.3 (C-12), 42.3 (C-9), 23.5 (C-11); (+)-HRESIMS m/z 557.1424 [M + Na]+ (calcd for C29H26NaO10, 557.1418).

4.3.3. ICMP 16789—Dactylonectria macrodidyma

Nineteen PDA plates were inoculated with ICMP 16789 and incubated at room temperature for 4 weeks. Fully grown fungal plates were freeze-dried (8.45 g, dry weight) and extracted with MeOH (2 × 400 mL) for 4 h followed by CH2Cl2 (400 mL) overnight. Combined organic extracts were concentrated under reduced pressure to afford a brown oil (0.56 g). The crude product was subjected to C8 reversed-phase column chromatography eluted with a gradient of H2O/MeOH to afford five fractions (F1–F5). F4 was subjected to purification by Sephadex LH-20 and eluted with MeOH/5% CH2Cl2 to afford five fractions (A1–A5). Fractions A2–A4 were combined and triturated with CH2Cl2 to afford brefeldin A (8) (2.37 mg). F3 was subjected to purification by Sephadex LH-20, eluted with MeOH/5% CH2Cl2 to afford brefeldin C (9) (0.79 mg).

Brefeldin A (8)

[α]D22 = +58.2 (c = 0.22, MeOH) [lit [α]D29 = +92.2 (c = 0.51, MeOH) [7]]; 1H NMR (CD3OD, 400 MHz) δ 7.46 (1H, dd, J = 15.6, 3.1 Hz, H-3), 5.82 (1H, dd, J = 15.6, 2.2 Hz, H-2), 5.78–5.72 (1H, m, H-11), 5.27 (1H, dd, J = 15.3, 9.5 Hz, H-10) 4.82–4.78 (1H, m, H-15), 4.24–4.20 (1H, m, H-7), 4.05–4.02 (1H, m, H-4), 2.42–2.35 (1H, m, H-9), 2.16–2.10 (1H, m, H2-8a), 2.04–1.98 (2H, m, H2-6a, H2-12a), 1.89–1.80 (4H, m, H-5, H2-6b, H2-12b, H2-13a), 1.79–1.73 (1H, m, H2-14a), 1.62–1.55 (1H, m, H2-14b), 1.47–1.42 (1H, m, H2-8b), 1.24 (3H, d, J = 6.2 Hz, H3-16), 0.94–0.87 (1H, m, H2-13b); 13C NMR (CD3OD, 100 MHz) δ 167.3 (C-1), 154.1 (C-3), 136.9 (C-10), 130.4 (C-11), 116.6 (C-2), 75.8 (C-4), 72.2 (C-15), 72.0 (C-7), 52.3 (C-5), 44.4 (C-9), 43.3 (C-8), 40.7 (C-6), 34.0 (C-14), 32.4 (C-12), 27.1 (C-13), 20.1 (C-16); (+)-HRESIMS m/z 303.1569 [M + Na]+ (calcd for C16H24NaO4, 303.1567).

Brefeldin C (9)

[α]D20 = +83.1 (c = 0.22, MeOH) [lit [α]D20 = +121 (c = 0.07, MeOH) [11]]; 1H NMR (CD3OD, 400 MHz) δ 7.50 (1H, dd, J = 15.4, 3.3 Hz, H-3), 5.92–5.86 (1H, m, H-11), 5.87 (1H, dd, J = 15.4, 2.0 Hz, H-2), 5.26 (1H, dd, J = 15.1, 9.2 Hz, H-10), 4.82–4.80 (1H, m, H-4), 4.24–4.21 (1H, m, H-15), 2.82–2.78 (1H, m, H-9), 2.05–2.01 (3H, m, H2-6a, H2-8a, H2-12a), 1.94–1.86 (4H, m, H-5, H2-8b, H2-12b, H2-13a), 1.79–1.73 (2H, m, H2-7a, H2-14a), 1.65–1.57 (3H, m, H2-6b, H2-7b, H2-14b), 1.25 (3H, d, J = 6.4 Hz, H3-16), 0.99–0.97 (1H, m, H2-13b); (+)-HRESIMS m/z 287.1618 [M + Na]+ (calcd for C16H24NaO3, 287.1623).

4.3.4. ICMP 20542—Dactylonectria torresensis

Nineteen PDA plates were inoculated with ICMP 20542 and incubated at room temperature for 5 weeks. Fully grown fungal plates were freeze-dried (15.26 g, dry weight) and extracted with MeOH (2 × 400 mL) for 4 h followed by CH2Cl2 (400 mL) overnight. Combined organic extracts were concentrated under reduced pressure to afford a brown oil (0.37 g). The crude product was subjected to C8 reversed-phase column chromatography eluted with a gradient of H2O/MeOH to afford five fractions (F1–F5). F4 was subjected to purification by Sephadex LH-20 and eluted with MeOH/5% CH2Cl2 to afford brefeldin A (8) (1.57 mg).

4.3.5. ICMP 16794—Ilyonectria europaea

Ten PDA plates were inoculated with ICMP 16794 and incubated at room temperature for 4 weeks. Fully grown fungal plates were freeze-dried (5.42 g, dry weight) and extracted with MeOH (2 × 200 mL) for 4 h followed by CH2Cl2 (200 mL) overnight. Combined organic extracts were concentrated under reduced pressure to afford a brown oil (0.280 g). The crude product was subjected to purification by C8 reversed-phase column chromatography eluted with a gradient of H2O/MeOH to afford five fractions (F1–F5). Fraction F3 afforded radicicol (10) as a white solid (10.13 mg).

Radicicol (10)

[α]D21 = +96 (c = 0.25, CHCl3) [lit [α]D20 = +95.3 (c = 0.06, CHCl3) [8]; 1H NMR (CD3OD, 400 MHz) δ 7.59 (1H, dd, J = 16.1, 9.9 Hz, H-8), 6.46 (1H, s, H-15), 6.23 (1H, td, J = 10.7, 9.9 Hz, H-7), 6.09 (1H, d, J = 16.1 Hz, H-9), 5.77 (1H, dd, J = 10.7, 4.0 Hz, H-6), 5.38 (1H, m, H-2), 4.16 (1H, d, J = 16.2 Hz, H-11a), 3.92 (1H, d, J = 16.2 Hz, H-11b), 3.32 (1H, m, H-5), 3.05 (1H, dt, J = 8.6, 2.7 Hz, H-4), 2.41 (1H, dt, J = 14.8, 3.5 Hz, H-3a), 1.72 (1H, m, H-3b), 1.52 (3H, d, J = 6.6 Hz, H3-1); 13C NMR (CD3OD, 100 MHz) δ 200.6 (C-10), 169.7 (C-18), 160.9 (C-14, C-16), 140.6 (C-8), 136.6 (C-6), 135.2 (C-12), 131.4 (C-9), 130.8 (C-7), 116.9 (C-13), 108.4 (C-17), 104.5 (C-15), 71.8 (C-2), 56.9 (C-4), 56.5 (C-5), 46.8 (C-11), 37.5 (C-3), 18.7 (C-1); (+)-HRESIMS m/z 387.0614 [M + Na]+ (calcd for C18H17ClNaO6, 387.0606).

4.3.6. ICMP 16795—Ilyonectria liriodendri

Four PDA plates were inoculated with ICMP 16795 and incubated at room temperature for 4 weeks. Fully grown fungal plates were freeze-dried (2.14 g, dry weight) and extracted with MeOH (2 × 200 mL) for 4 h followed by CH2Cl2 (200 mL) overnight. Combined organic extracts were concentrated under reduced pressure to afford a brown oil (0.189 g). The crude product was subjected to purification by Sephadex LH-20, eluted with MeOH, to afford four fractions (F1–F4). Purification of F2 by silica gel column chromatography, eluted with n-hexane/EtOAc (1:1), afforded a brown solid that was subsequently triturated with CH2Cl2 to afford radicicol (10) as a white solid (8.47 mg).

4.4. Antimicrobial Testing of Fungal Cultures

Fungal isolates were grown on PDA (Fort Richard, Auckland, New Zealand) prior to screening for antibacterial activity using a 24-well plate assay, using a modification of a protocol previously described [62]. Briefly, 0.5 mL aliquots of PDA agar were added to triplicate wells of a black 24-well plate (4titude, Millennium Science, Auckland, New Zealand) and allowed to set. With the aid of a sterile scalpel blade, fungal isolates grown on PDA were sectioned into cubes ≤5 mm in diameter and transferred to agar-filled wells of the 24-well plates, ensuring that each cube was placed fungus-side down and touching the agar. The inoculated 24-well screening plates were covered, sealed, and incubated at room temperature.
Fungal growth was monitored visually at regular intervals and recorded the time taken for them to either cover the entire well or to stop visibly growing. During this time, a 6 mm plug of agar was removed from each well using a biopsy punch twice. To screen for antimycobacterial activity, M. abscessus BSG301 [63] and M. marinum BSG101 [64] were resuspended in 0.8% Middlebrook 7H9 agar (Fort Richard, New Zealand) supplemented with 10% Middlebrook ADC enrichment media (Fort Richard, New Zealand) to a final concentration of approx. 107 colony forming units (CFU)/mL for M. abscessus and 108 CFU/mL for M. marinum. To screen for activity against A. baumannii, E. coli, and P. aeruginosa, bioluminescent derivatives of these bacteria were resuspended in 0.8% Mueller Hinton agar (Fort Richard, New Zealand) to achieve a final concentration of approx. 106 colony forming units (CFU)/mL.
Thereafter, 50 μL of the bacterial–agar mixtures were pipetted into the cylindrical holes left after the removal of the fungal–agar plugs and allowed to set. The bacterial luminescence was measured at regular intervals using a Victor X-3 luminescence plate reader (PerkinElmer, Waltham, MA, USA) with an integration time of 1 s. Between measurements, plates were covered and incubated static at 28 °C for M. marinum and 37 °C for all of the other bacteria. Luminescence was also measured for bacteria inoculated into wells containing no fungus as the control.

4.5. Antimicrobial Assays of Pure Compounds

Antimicrobial evaluation of the pure compounds against A. baumannii ATCC 19606, Candida albicans ATCC 90028, Cryptococcus neoformans ATCC 208821, E. coli ATCC 25922, K. pneumoniae ATCC 700603, P. aeruginosa ATCC 27853, and S. aureus ATCC 43300 (MRSA) was undertaken at the Community for Open Antimicrobial Drug Discovery at The University of Queensland (St. Lucia, Queensland, Australia) according to standard protocols [65] as previously described [63,66,67].
Antimicrobial evaluation against M. abscessus and M. marinum was undertaken using in-house assays with the bioluminescent derivatives M. abscessus BSG301 [63] and M. marinum BSG101 [64]. Assays were performed as previously described [63,68]. Specifically, mycobacterial cultures were grown with shaking at 200 rpm in Middlebrook 7H9 broth (Fort Richard, Auckland, New Zealand) supplemented with 10% Middlebrook ADC enrichment media (Fort Richard, Auckland, New Zealand), 0.4% glycerol (Sigma-Aldrich, St. Louis, MO, USA), and 0.05% tyloxapol (Sigma-Aldrich, St. Louis, MO, USA). M. abscessus was grown at 37 °C and M. marinum at 28 °C. Cultures were grown until they reached the stationary phase (approximately 3–5 days for M. abscessus BSG301 and 7–10 days for M. marinum BSG101) and then diluted in MHB supplemented with 10% Middlebrook ADC enrichment media and 0.05% tyloxapol to give an optical density at 600 nm (OD600) of 0.001, which is the equivalent of ~106 bacteria per mL. Pure compounds were dissolved in DMSO and added to the wells of a black 96-well plate (Nunc, Thermo Scientific, Waltham, MA, USA) at doubling dilutions with a maximum concentration of 128 mg/mL. Then, 50 mL of diluted bacterial culture was added to each well of the compound containing plates giving final compound concentrations of 0–64 mg/mL and a cell density of ~5 × 105 CFU/mL. Rifampicin (Sigma-Aldrich, St. Louis, MO, USA) was used as the positive control at 1000 mg/mL for M. abscessus and 10 mg/mL for M. marinum. Between measurements, plates were covered, placed in a plastic box lined with damp paper towels, and incubated with shaking at 100 rpm at 37 °C for M. abscessus and 28 °C for M. marinum. Bacterial luminescence was measured at regular intervals over 72 h using a Victor X-3 luminescence plate reader with an integration time of 1 s. We defined the MIC as causing a 1-log reduction in light production, as previously described [69]. Experiments were carried out in triplicate and repeated if there was sufficient compound.

5. Conclusions

Investigation of several pathogens from the ICMP collection, Alternaria radicina, Cercospora beticola, Dactylonectria macrodidyma, D. torresensis, Ilyonectria europaea, and I. liriodendra afforded ten secondary metabolites, one of which was novel. Of the isolated metabolites, dehydro-curvularin (6) and radicicol (10) exhibited good activity against M. marinum; cercosporin (7) exhibited potent activity against MRSA; while brefeldin A (8) and radicicol (10) exhibited moderate antifungal activity against C. albicans. Although three of the compounds, 6–8, were also found to be cytotoxic, 10 was non-cytotoxic and non-haemolytic, making it a promising candidate for further study.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/molecules28031142/s1. Figure S1: 1H NMR spectrum (CD3OD, 400 MHz) of 1; Figure S2: 13C NMR spectrum (CD3OD, 100 MHz) of 1; Figure S3: COSY NMR spectrum (CD3OD) of 1; Figure S4: HSQC NMR spectrum (CD3OD) of 1; Figure S5: HMBC NMR spectrum (CD3OD) of 1; Figure S6. 1H NMR spectrum (CDCl3, 400 MHz) of 1.

Author Contributions

Conceptualization and supervision, B.R.C. and S.W.; Methodology, validation, formal analysis, investigation, data curation, M.M.C., S.A.L., D.M., S.J.v.d.P. and A.G.; Writing—original draft preparation, M.M.C.; Funding acquisition, S.W.; Writing—review and editing, M.M.C., B.R.C. and S.W.; Resources, B.S.W. All authors have read and agreed to the published version of the manuscript.

Funding

This work was supported by funds from Cure Kids, NZ Carbon Farming, and donations from the New Zealand public.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

Raw data for the primary fungal screening and for the testing of pure compounds against M. abscessus and M. marinum are available on Figshare (https://doi.org/10.17608/k6.auckland.21714851, accessed on 20 January 2023).

Acknowledgments

We would like to thank Michael Schmitz and Tony Chen for their assistance with the NMR and mass spectrometric data and the Community for Antimicrobial Drug Discovery (CO-ADD), funded by the Wellcome Trust (UK) and The University of Queensland (Australia), for carrying out the activity and toxicity testing of the pure compounds.

Conflicts of Interest

The authors declare no conflict of interest.

Sample Availability

Samples of compounds 4–7 and 10 are available from the authors.

References

  1. Gudesblat, G.E.; Torres, P.S.; Vojno, A.A. Stomata and Pathogens. Plant Signal. Behav. 2009, 4, 1114–1116. [Google Scholar] [CrossRef] [PubMed]
  2. Demoor, A.; Silar, P.; Brun, S. Appressorium: The Breakthrough in Dikarya. J. Fungi 2019, 5, 72. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  3. Lo Presti, L.; Lanver, D.; Schweizer, G.; Tanaka, S.; Liang, L.; Tollot, M.; Zuccaro, A.; Reissmann, S.; Kahmann, R. Fungal Effectors and Plant Susceptibility. Annu. Rev. Plant Biol. 2015, 66, 513–545. [Google Scholar] [CrossRef] [PubMed]
  4. Pusztahelyi, T.; Holb, I.; Pócsi, I. Secondary Metabolites in Fungus-Plant Interactions. Front. Plant Sci. 2015, 6, 573. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  5. Abdullah, A.S.; Moffat, C.S.; Lopez-Ruiz, F.J.; Gibberd, M.R.; Hamblin, J.; Zerihun, A. Host–Multi-Pathogen Warfare: Pathogen Interactions in Co-Infected Plants. Front. Plant Sci. 2017, 8, 1806. [Google Scholar] [CrossRef] [Green Version]
  6. Chan, J.; Jamison, T.F. Synthesis of (−)-Terpestacin via Catalytic, Stereoselective Fragment Coupling: Siccanol Is Terpestacin, Not 11-epi- Terpestacin. J. Am. Chem. Soc. 2003, 125, 11514–11515. [Google Scholar] [CrossRef]
  7. Wu, Y.; Shen, X.; Yang, Y.-Q.; Hu, Q.; Huang, J.-H. An Aldol Approach to the Total Synthesis of (+)-Brefeldin A. Tetrahedron Lett. 2004, 45, 199–202. [Google Scholar] [CrossRef]
  8. Barluenga, S.; Moulin, E.; Lopez, P.; Winssinger, N. Solution- and Solid-Phase Synthesis of Radicicol (Monorden) and Pochonin C. Chem. A Eur. J. 2005, 11, 4935–4952. [Google Scholar] [CrossRef]
  9. Xie, L.W.; Ouyang, Y.C.; Zou, K.; Wang, G.H.; Chen, M.J.; Sun, H.M.; Dai, S.K.; Li, X. Isolation and Difference in Anti-Staphylococcus Aureus Bioactivity of Curvularin Derivates from Fungus Eupenicillium sp. Appl. Biochem. Biotechnol. 2009, 159, 284–293. [Google Scholar] [CrossRef]
  10. Morgan, B.J.; Mulrooney, C.A.; Kozlowski, M.C. Perylenequinone Natural Products: Evolution of the Total Synthesis of Cercosporin. J. Org. Chem. 2010, 75, 44–56. [Google Scholar] [CrossRef]
  11. Archambaud, S.; Legrand, F.; Aphecetche-Julienne, K.; Collet, S.; Guingant, A.; Evain, M. Total Synthesis of (+)-Brefeldin C, (+)-nor-Me Brefeldin A and (+)-4- Epi -nor-Me Brefeldin A. Eur. J. Org. Chem. 2010, 2010, 1364–1380. [Google Scholar] [CrossRef]
  12. Shao, M.; Wang, N.; Lin, F.; Zhang, Y. Identification and Herbicidal Active Ingredients of DN02, a Fungus Residing in a Ceriagrion Sp. Gut. ActanPhytophylacica Sin. 2014, 41, 98–102. [Google Scholar]
  13. Clarke, D.D.; Nord, F.F.; Bhacca, N.S. Radicinin: Revision of Its Structure Obtained from NMR Measurements. Arch. Biochem. Biophys. 1963, 102, 473–474. [Google Scholar] [CrossRef]
  14. Iimura, S.; Oka, M.; Narita, Y.; Konishi, M.; Kakisawa, H.; Gao, Q.; Oki, T. Terpestacin, a Novel Syncytium Formation Inhibitor, Isolated from Arthrinium Species. Tetrahedron Lett. 1993, 34, 493–496. [Google Scholar] [CrossRef]
  15. Nozoe, S.; Hirai, K.; Tsuda, K.; Ishibashi, K.; Shirasaka, M.; Frederick Grove, J. The Structure of Pyrenophorin. Tetrahedron Lett. 1965, 6, 4675–4677. [Google Scholar] [CrossRef]
  16. Musgrave, O.C. Curvularin. Part I. Isolation and Partial Characterisation of a Metabolic Product from a New Species of Curvularia. J. Chem. Soc. 1956, 4301–4305. [Google Scholar] [CrossRef]
  17. Starratt, A.N.; White, G.A. Identification of Some Metabolites of Alternaria cucumerina (E. & E.) Ell. Phytochemistry 1968, 7, 1883–1884. [Google Scholar] [CrossRef]
  18. Kuyama, S.; Tamura, T. Cercosporin. A Pigment of Cercosporina Kikuchii Matsumoto et Tomoyasu. I. Cultivation of Fungus, Isolation and Purification of Pigment. J. Am. Chem. Soc. 1957, 79, 5725–5726. [Google Scholar] [CrossRef]
  19. Singleton, V.L.; Bohonos, N.; Ullstrup, A.J. Decumbin, a New Compound from a Species of Penicillium. Nature 1958, 181, 1072–1073. [Google Scholar] [CrossRef]
  20. Sunagawa, M.; Ohta, T.; Nozoe, S. Isolation and Structure of Brefeldin C. Heterocycles 1979, 13, 267–270. [Google Scholar]
  21. Mirrington, R.N.; Ritchie, E.; Shoppee, C.W.; Taylor, W.C.; Sternhell, S. The Constitution of Radicicol. Tetrahedron Lett. 1964, 5, 365–370. [Google Scholar] [CrossRef]
  22. Fajola, A.O. Cercosporin, a Phytotoxin from Cercospora spp. Physiol. Plant Pathol. 1978, 13, 157–164. [Google Scholar] [CrossRef]
  23. Robeson, D.J.; Strobel, G.A.; Strange, R.N. The Identification of a Major Phytotoxic Component from Alternaria macrospora as Aβ-Dehydrocurvularin. J. Nat. Prod. 1985, 48, 139–141. [Google Scholar] [CrossRef]
  24. Shimada, Y.; Ogawa, T.; Sato, A.; Kaneko, I.; Tsujita, Y. Induction of Differentiation of HL-60 Cells by the Anti-Fungal Antibiotic, Radicicol. J. Antibiot. 1995, 48, 824–830. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  25. Tanaka, Y.; Shiomi, K.; Kamei, K.; Sugoh-Hagino, M.; Enomoto, Y.; Fang, F.; Yamaguchi, Y.; Masuma, R.; Zhang, C.G.; Zhang, X.W.; et al. Antimalarial Activity of Radicicol. Heptelidic Acid and Other Fungal Metabolites. J. Antibiot. 1998, 51, 153–160. [Google Scholar] [CrossRef] [Green Version]
  26. de Souza, A.O.; Galetti, F.C.S.; Silva, C.L.; Bicalho, B.; Parma, M.M.; Fonseca, S.F.; Marsaioli, A.J.; Trindade, A.C.L.B.; Gil, R.P.F.; Bezerra, F.S.; et al. Antimycobacterial and Cytotoxicity Activity of Synthetic and Natural Compounds. Quím. Nova 2007, 30, 1563–1566. [Google Scholar] [CrossRef] [Green Version]
  27. Zhang, Y.; Kong, L.; Jiang, D.; Yin, C.; Cai, Q.; Chen, Q.; Zheng, J. Phytotoxic and Antifungal Metabolites from Curvularia sp. FH01 Isolated from the Gut of Atractomorpha sinensis. Bioresour. Technol. 2011, 102, 3575–3577. [Google Scholar] [CrossRef]
  28. Bladt, T.; Frisvad, J.; Knudsen, P.; Larsen, T. Anticancer and Antifungal Compounds from Aspergillus, Penicillium and Other Filamentous Fungi. Molecules 2013, 18, 11338–11376. [Google Scholar] [CrossRef] [Green Version]
  29. Sztiller-Sikorska, M.; Koprowska, K.; Majchrzak, K.; Hartman, M.; Czyz, M. Natural Compounds’ Activity against Cancer Stem-Like or Fast-Cycling Melanoma Cells. PLoS ONE 2014, 9, e90783. [Google Scholar] [CrossRef] [Green Version]
  30. Li, S.; Shao, M.-W.; Lu, Y.-H.; Kong, L.-C.; Jiang, D.-H.; Zhang, Y.-L. Phytotoxic and Antibacterial Metabolites from Fusarium proliferatum ZS07 Isolated from the Gut of Long-Horned Grasshoppers. J. Agric. Food Chem. 2014, 62, 8997–9001. [Google Scholar] [CrossRef]
  31. Ye, X.; Anjum, K.; Song, T.; Wang, W.; Yu, S.; Huang, H.; Lian, X.-Y.; Zhang, Z. A New Curvularin Glycoside and Its Cytotoxic and Antibacterial Analogues from Marine Actinomycete Pseudonocardia sp. HS7. Nat. Prod. Res. 2016, 30, 1156–1161. [Google Scholar] [CrossRef]
  32. Piemontese, L.; Vitucci, G.; Catto, M.; Laghezza, A.; Perna, F.; Rullo, M.; Loiodice, F.; Capriati, V.; Solfrizzo, M. Natural Scaffolds with Multi-Target Activity for the Potential Treatment of Alzheimer’s Disease. Molecules 2018, 23, 2182. [Google Scholar] [CrossRef] [PubMed]
  33. Handayani, D.; Putri, R.A.; Ismed, F.; Hertiani, T.; Ariantari, N.P.; Proksch, P. Bioactive Metabolite from Marine Sponge-Derived Fungus Cochliobolus geniculatus WR12. RJC 2020, 13, 417–422. [Google Scholar] [CrossRef]
  34. Kuttikrishnan, S.; Prabhu, K.S.; Al Sharie, A.H.; Al Zu’bi, Y.O.; Alali, F.Q.; Oberlies, N.H.; Ahmad, A.; El-Elimat, T.; Uddin, S. Natural Resorcylic Acid Lactones: A Chemical Biology Approach for Anticancer Activity. Drug Discov. Today 2022, 27, 547–557. [Google Scholar] [CrossRef]
  35. Hussain, H.; Kliche-Spory, C.; Al-Harrasi, A.; Al-Rawahi, A.; Abbas, G.; Green, I.R.; Schulz, B.; Krohn, K.; Shah, A. Antimicrobial Constituents from Three Endophytic Fungi. Asian Pac. J. Trop. Med. 2014, 7, S224–S227. [Google Scholar] [CrossRef]
  36. Zhang, W.; Krohn, K.; Egold, H.; Draeger, S.; Schulz, B. Diversity of Antimicrobial Pyrenophorol Derivatives from an Endophytic Fungus, Phoma sp. Eur. J. Org. Chem. 2008, 2008, 4320–4328. [Google Scholar] [CrossRef]
  37. Rutala, W.A.; Weber, D.J. Infection Control: The Role of Disinfection and Sterilization. J. Hosp. Infect. 1999, 43, S43–S55. [Google Scholar] [CrossRef]
  38. Betina, V.; Mičeková, D. Antimicrobial Properties of Fungal Macrolide Antibiotics. Z. Allg. Mikrobiol. 1972, 12, 355–364. [Google Scholar] [CrossRef]
  39. Wicklow, D.T.; Joshi, B.K.; Gamble, W.R.; Gloer, J.B.; Dowd, P.F. Antifungal Metabolites (Monorden, Monocillin IV, and Cerebrosides) from Humicola fuscoatra Traaen NRRL 22980, a Mycoparasite of Aspergillus flavus Sclerotia. Appl Env. Microbiol 1998, 64, 4482–4484. [Google Scholar] [CrossRef] [Green Version]
  40. Trisuwan, K.; Rukachaisirikul, V.; Sukpondma, Y.; Phongpaichit, S.; Preedanon, S.; Sakayaroj, J. Lactone Derivatives from the Marine-Derived Fungus Penicillium sp. PSU-F44. Chem. Pharm. Bull. 2009, 57, 1100–1102. [Google Scholar] [CrossRef] [Green Version]
  41. Jung, H.J.; Shim, J.S.; Lee, J.; Song, Y.M.; Park, K.C.; Choi, S.H.; Kim, N.D.; Yoon, J.H.; Mungai, P.T.; Schumacker, P.T.; et al. Terpestacin Inhibits Tumor Angiogenesis by Targeting UQCRB of Mitochondrial Complex III and Suppressing Hypoxia-Induced Reactive Oxygen Species Production and Cellular Oxygen Sensing*. J. Biol. Chem. 2010, 285, 11584–11595. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  42. Caputo, O.; Viola, F. Isolation of α, β–Dehydrocurvularin from Aspergillus aureofulgens. Planta Med. 1977, 31, 31–32. [Google Scholar] [CrossRef] [PubMed]
  43. Daub, M.E.; Ehrenshaft, M. The Photoactivated Cercospora Toxin Cercosporin: Contributions to Plant Disease and Fundamental Biology. Annu. Rev. Phytopathol. 2000, 38, 461–490. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  44. Suzuki, Y.; Tanaka, H.; Aoki, H.; Tamura, T. Ascotoxin (Decumbin), a Metabolite of Ascochyta imperfecta PECK. Agric. Biol. Chem. 1970, 34, 395–413. [Google Scholar] [CrossRef] [Green Version]
  45. Hutchinson, C.R.; Shu-Wen, L.; McInnes, A.G.; Walter, J.A. Comparative Biochemistry of Fatty Acid and Macrolide Antibiotic (Brefeldin a). Formation in Penicillium brefeldianum. Tetrahedron 1983, 39, 3507–3513. [Google Scholar] [CrossRef]
  46. Anadu, N.O.; Davisson, V.J.; Cushman, M. Synthesis and Anticancer Activity of Brefeldin A Ester Derivatives. J. Med. Chem. 2006, 49, 3897–3905. [Google Scholar] [CrossRef]
  47. Moulin, E.; Zoete, V.; Barluenga, S.; Karplus, M.; Winssinger, N. Design, Synthesis, and Biological Evaluation of HSP90 Inhibitors Based on Conformational Analysis of Radicicol and Its Analogues. J. Am. Chem. Soc. 2005, 127, 6999–7004. [Google Scholar] [CrossRef]
  48. Trivedi, R.S.; Hampton, J.G.; Townshend, J.M.; Jaspers, M.V.; Ridgway, H.J. First Report of Alternaria carotiincultae on Carrot Seed Produced in New Zealand. Plant Dis. 2010, 94, 1168. [Google Scholar] [CrossRef]
  49. Specimen Details. Available online: https://scd.landcareresearch.co.nz/Specimen/ICMP_5619 (accessed on 5 July 2022).
  50. Cercospora beticola Sacc. 1876—Biota of NZ. Available online: https://biotanz.landcareresearch.co.nz/scientific-names/1cb180db-36b9-11d5-9548-00d0592d548c (accessed on 15 July 2022).
  51. Specimen Details. Available online: https://scd.landcareresearch.co.nz/Specimen/ICMP%2015907 (accessed on 25 October 2022).
  52. Lombard, L.; van der Merwe, A.; Groenewald, J.Z.; Crous, P.W. Lineages in Nectriaceae: Re-Evaluating the Generic Status of Ilyonectria and Allied Genera. Phytopathol. Mediterr. 2014, 53, 515–532. [Google Scholar]
  53. Specimen Details. Available online: https://scd.landcareresearch.co.nz/Specimen/ICMP%2016789 (accessed on 25 October 2022).
  54. Cabral, A.; Rego, C.; Nascimento, T.; Oliveira, H.; Groenewald, J.Z.; Crous, P.W. Multi-Gene Analysis and Morphology Reveal Novel Ilyonectria Species Associated with Black Foot Disease of Grapevines. Fungal Biol. 2012, 116, 62–80. [Google Scholar] [CrossRef]
  55. Specimen Details. Available online: https://scd.landcareresearch.co.nz/Specimen/ICMP%2020542 (accessed on 25 October 2022).
  56. Specimen Details. Available online: https://scd.landcareresearch.co.nz/Specimen/ICMP%2016794 (accessed on 25 October 2022).
  57. Probst, C.M.; Ridgway, H.J.; Jaspers, M.V.; Eirian Jones, E. Pathogenicity of Ilyonectria liriodendri and Dactylonectria macrodidyma Propagules in Grapevines. Eur. J. Plant Pathol. 2019, 154, 405–421. [Google Scholar] [CrossRef]
  58. Specimen Details. Available online: https://scd.landcareresearch.co.nz/Specimen/ICMP%2016795 (accessed on 25 October 2022).
  59. Hansen, O.R. Stemphylone, a Root-Killing Substance from Stemphylium radicinum. Acta Chem. Scand. 1954, 8, 1332–1334. [Google Scholar] [CrossRef]
  60. Chan, J.; Jamison, T.F. Enantioselective Synthesis of (−)-Terpestacin and Structural Revision of Siccanol Using Catalytic Stereoselective Fragment Couplings and Macrocyclizations. J. Am. Chem. Soc. 2004, 126, 10682–10691. [Google Scholar] [CrossRef]
  61. Bicalho, B.; Gonçalves, R.A.C.; Zibordi, A.P.M.; Manfio, G.P.; Marsaioli, A.J. Antimicrobial Compounds of Fungi Vectored by Clusia spp. (Clusiaceae) Pollinating Bees. Z. Nat. C 2003, 58, 746–751. [Google Scholar] [CrossRef]
  62. Wiles, S.; Grey, A. Bioluminescence-Based 24 Well Plate Assay for Screening Fungi for Activity against Mycobacterium marinum. Available online: https://www.protocols.io/view/bioluminescence-based-24-well-plate-assay-for-scre-bvnbn5an (accessed on 12 December 2022).
  63. Cadelis, M.M.; Gordon, H.; Grey, A.; Geese, S.; Mulholland, D.R.; Weir, B.S.; Copp, B.R.; Wiles, S. Isolation of a Novel Polyketide from Neodidymelliopsis Sp. Molecules 2021, 26, 3235. [Google Scholar] [CrossRef]
  64. Dalton, J.P.; Uy, B.; Okuda, K.S.; Hall, C.J.; Denny, W.A.; Crosier, P.S.; Swift, S.; Wiles, S. Screening of Anti-Mycobacterial Compounds in a Naturally Infected Zebrafish Larvae Model. J. Antimicrob. Chemother. 2017, 72, 421–427. [Google Scholar] [CrossRef] [Green Version]
  65. Blaskovich, M.A.T.; Zuegg, J.; Elliott, A.G.; Cooper, M.A. Helping Chemists Discover New Antibiotics. ACS Infect. Dis. 2015, 1, 285–287. [Google Scholar] [CrossRef]
  66. Cadelis, M.M.; Geese, S.; Gris, L.; Weir, B.S.; Copp, B.R.; Wiles, S. A Revised Structure and Assigned Absolute Configuration of Theissenolactone A. Molecules 2020, 11, 4823. [Google Scholar] [CrossRef]
  67. Cadelis, M.M.; Geese, S.; Uy, B.B.; Mulholland, D.R.; van de Pas, S.J.; Grey, A.; Weir, B.S.; Copp, B.R.; Wiles, S. Antimicrobial Metabolites against Methicillin-Resistant Staphylococcus aureus from the Endophytic Fungus Neofusicoccum australe. Molecules 2021, 26, 1094. [Google Scholar] [CrossRef]
  68. Grey, A.B.J.; Cadelis, M.M.; Diao, Y.; Park, D.; Lumley, T.; Weir, B.S.; Copp, B.R.; Wiles, S. Screening of Fungi for Antimycobacterial Activity Using a Medium-Throughput Bioluminescence-Based Assay. Front. Microbiol. 2021, 12, 2525. [Google Scholar] [CrossRef]
  69. Dalton, J.P.; Uy, B.; Phummarin, N.; Copp, B.R.; Denny, W.A.; Swift, S.; Wiles, S. Effect of Common and Experimental Anti-Tuberculosis Treatments on Mycobacterium tuberculosis Growing as Biofilms. PeerJ 2016, 4, e2717. [Google Scholar] [CrossRef] [PubMed]
Figure 1. Antibacterial activity of ICMP 5619, 15907, 16789, 16794, 16795, and 20542 against A. baumannii, E. coli, M. abscessus, M. marinum, and P. aeruginosa. Data are presented as box and whisker plots of the activity scores. The solid line shown at 0 is the median control value while the dotted line at 1 is the activity threshold. Scores above 1 correspond to a >90% reduction in bacterial bioluminescence compared to the corresponding no-fungi control. Similarly, an activity score above 2 corresponds to a >99% reduction.
Figure 1. Antibacterial activity of ICMP 5619, 15907, 16789, 16794, 16795, and 20542 against A. baumannii, E. coli, M. abscessus, M. marinum, and P. aeruginosa. Data are presented as box and whisker plots of the activity scores. The solid line shown at 0 is the median control value while the dotted line at 1 is the activity threshold. Scores above 1 correspond to a >90% reduction in bacterial bioluminescence compared to the corresponding no-fungi control. Similarly, an activity score above 2 corresponds to a >99% reduction.
Molecules 28 01142 g001
Figure 2. Structures of the isolated natural products 1–10.
Figure 2. Structures of the isolated natural products 1–10.
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Figure 3. Selected COSY correlations (blue) and HMBC correlations (red) for 1.
Figure 3. Selected COSY correlations (blue) and HMBC correlations (red) for 1.
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Figure 4. Antimycobacterial activity of compounds 1, 2, and 4–10 against M. abscessus BSG301 and M. marinum BSG101. Data are presented as box and whisker plots of activity scores. The solid line shown at 0 is the median control value while the dotted line at 1 is the activity threshold. Scores above 1 correspond to a >90% reduction in bacterial bioluminescence compared to the corresponding no-fungi control. Similarly, an activity score above 2 corresponds to a >99% reduction.
Figure 4. Antimycobacterial activity of compounds 1, 2, and 4–10 against M. abscessus BSG301 and M. marinum BSG101. Data are presented as box and whisker plots of activity scores. The solid line shown at 0 is the median control value while the dotted line at 1 is the activity threshold. Scores above 1 correspond to a >90% reduction in bacterial bioluminescence compared to the corresponding no-fungi control. Similarly, an activity score above 2 corresponds to a >99% reduction.
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Table 1. Antimicrobial and antifungal activities of natural products 1–8 and 10.
Table 1. Antimicrobial and antifungal activities of natural products 1–8 and 10.
MIC (µM)HEK293
CC50 (µM) h
HC10 (µM) i
S. a aE. c bK. p cP. a dA. b eC. a fC. n g
1>184>184>184>184>184>184>184n.t jn.t j
2>135>135>135>135>135>135>135n.t jn.t j
3>79>79>79>79>79>79>79n.t jn.t j
4>102>102>102>102>102>102>102n.t jn.t j
5>109>109>109>109>109>109>109n.t jn.t j
6>110>110>110>110>110>110>1101.27>110
7≤0.47>60>60>60>60>60>6025.33>60
8>114>114>114>114>11457>1140.89>114
10>88>88>88>88>8844>88>88>88
Active compounds are shown in bold. All values are presented as the mean of two experiments. a S. aureus ATCC 43300 (MRSA) with vancomycin (MIC 0.7 μM) used as a positive control; b E. coli ATCC 25922 with colistin (MIC 0.1 μM); c K. pneumoniae ATCC 700603 with colistin (MIC 0.2 μM) as a positive control; d P. aeruginosa ATCC 27853 with colistin (MIC 0.2 μM); e A. baumanii ATCC 19606 with colistin (MIC 0.2 μM) as a positive control; f C. albicans ATCC 90028 with fluconazole (MIC 0.4 μM) as a positive control; g C. neoformans ATCC 208821 with fluconazole (MIC 26 μM) as a positive control; h Concentration of compound at 50% cytotoxicity on HEK293 human embryonic kidney cells with tamoxifen as the positive control (IC50 24 μM); i Concentration of compound at 10% haemolytic activity on human red blood cells with melittin as the positive control (HC10 0.95 μM); j Not tested.
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Cadelis, M.M.; Li, S.A.; van de Pas, S.J.; Grey, A.; Mulholland, D.; Weir, B.S.; Copp, B.R.; Wiles, S. Antimicrobial Natural Products from Plant Pathogenic Fungi. Molecules 2023, 28, 1142. https://doi.org/10.3390/molecules28031142

AMA Style

Cadelis MM, Li SA, van de Pas SJ, Grey A, Mulholland D, Weir BS, Copp BR, Wiles S. Antimicrobial Natural Products from Plant Pathogenic Fungi. Molecules. 2023; 28(3):1142. https://doi.org/10.3390/molecules28031142

Chicago/Turabian Style

Cadelis, Melissa M., Steven A. Li, Shara J. van de Pas, Alex Grey, Daniel Mulholland, Bevan S. Weir, Brent R. Copp, and Siouxsie Wiles. 2023. "Antimicrobial Natural Products from Plant Pathogenic Fungi" Molecules 28, no. 3: 1142. https://doi.org/10.3390/molecules28031142

APA Style

Cadelis, M. M., Li, S. A., van de Pas, S. J., Grey, A., Mulholland, D., Weir, B. S., Copp, B. R., & Wiles, S. (2023). Antimicrobial Natural Products from Plant Pathogenic Fungi. Molecules, 28(3), 1142. https://doi.org/10.3390/molecules28031142

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