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Keywords = real-time 3D single particle tracking

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18 pages, 2409 KB  
Article
Initial Results of Modeling and Improvement of BDS-2/GPS Broadcast Ephemeris Satellite Orbit Based on BP and PSO-BP Neural Networks
by Hanlin Chen, Fei Niu, Xing Su, Tao Geng, Zhimin Liu and Qiang Li
Remote Sens. 2021, 13(23), 4801; https://doi.org/10.3390/rs13234801 - 26 Nov 2021
Cited by 26 | Viewed by 3323
Abstract
With the rapid development and gradual perfection of GNSS in recent years, improving the real-time service performance of GNSS has become a research hotspot. In GNSS single-point positioning, broadcast ephemeris is used to provide a space–time reference. However, the orbit parameters of broadcast [...] Read more.
With the rapid development and gradual perfection of GNSS in recent years, improving the real-time service performance of GNSS has become a research hotspot. In GNSS single-point positioning, broadcast ephemeris is used to provide a space–time reference. However, the orbit parameters of broadcast ephemeris have meter-level errors, and no mathematical model can simulate the variation of this, which restricts the real-time positioning accuracy of GNSS. Based on this research background, this paper uses a BP (Back Propagation) neural network and a PSO (Particle Swarm Optimization)–BP neural network to model the variation in the orbit error of GPS and BDS broadcast ephemeris to improve the accuracy of broadcast ephemeris. The experimental results showed that the two neural network models in GPS can model the broadcast ephemeris orbit errors, and the results of the two models were roughly the same. The one-day and three-day improvement rates of RMS(3D) were 30–50%, but the PSO–BP neural network model was better able to model the trend of errors and effectively improve the broadcast ephemeris orbit accuracy. In BDS, both of the neural network models were able to model the broadcast ephemeris orbit errors; however, the PSO–BP neural network model results were better than those of the BP neural network. In the GEO satellite outcome of the PSO–BP neural network, the STD and RMS of the orbit error in three directions were reduced by 20–70%, with a 20–30% improvement over the BP neural network results. The IGSO satellite results showed that the PSO–BP neural network model output accuracy of the along- and radial-track directions experienced a 70–80% improvement in one and three days. The one- and three-day RMS(3D) of the MEO satellites showed that the PSO–BP neural network has a greater ability to resist gross errors than that of the BP neural network for modeling the changing trend of the broadcast ephemeris orbit errors. These results demonstrate that using neural networks to model the orbit error of broadcast ephemeris is of great significance to improving the orbit accuracy of broadcast ephemeris. Full article
(This article belongs to the Topic GNSS Measurement Technique in Aerial Navigation)
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25 pages, 9761 KB  
Review
Real-Time 3D Single Particle Tracking: Towards Active Feedback Single Molecule Spectroscopy in Live Cells
by Shangguo Hou, Courtney Johnson and Kevin Welsher
Molecules 2019, 24(15), 2826; https://doi.org/10.3390/molecules24152826 - 2 Aug 2019
Cited by 39 | Viewed by 9207
Abstract
Single molecule fluorescence spectroscopy has been largely implemented using methods which require tethering of molecules to a substrate in order to make high temporal resolution measurements. However, the act of tethering a molecule requires that the molecule be removed from its environment. This [...] Read more.
Single molecule fluorescence spectroscopy has been largely implemented using methods which require tethering of molecules to a substrate in order to make high temporal resolution measurements. However, the act of tethering a molecule requires that the molecule be removed from its environment. This is especially perturbative when measuring biomolecules such as enzymes, which may rely on the non-equilibrium and crowded cellular environment for normal function. A method which may be able to un-tether single molecule fluorescence spectroscopy is real-time 3D single particle tracking (RT-3D-SPT). RT-3D-SPT uses active feedback to effectively lock-on to freely diffusing particles so they can be measured continuously with up to photon-limited temporal resolution over large axial ranges. This review gives an overview of the various active feedback 3D single particle tracking methods, highlighting specialized detection and excitation schemes which enable high-speed real-time tracking. Furthermore, the combination of these active feedback methods with simultaneous live-cell imaging is discussed. Finally, the successes in real-time 3D single molecule tracking (RT-3D-SMT) thus far and the roadmap going forward for this promising family of techniques are discussed. Full article
(This article belongs to the Special Issue Single-Molecule Fluorescence Spectroscopy)
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16 pages, 4291 KB  
Review
Two-Dimensional and Three-Dimensional Single Particle Tracking of Upconverting Nanoparticles in Living Cells
by Kyujin Shin, Yo Han Song, Yeongchang Goh and Kang Taek Lee
Int. J. Mol. Sci. 2019, 20(6), 1424; https://doi.org/10.3390/ijms20061424 - 21 Mar 2019
Cited by 30 | Viewed by 8052
Abstract
Lanthanide-doped upconversion nanoparticles (UCNPs) are inorganic nanomaterials in which the lanthanide cations embedded in the host matrix can convert incident near-infrared light to visible or ultraviolet light. These particles are often used for long-term and real-time imaging because they are extremely stable even [...] Read more.
Lanthanide-doped upconversion nanoparticles (UCNPs) are inorganic nanomaterials in which the lanthanide cations embedded in the host matrix can convert incident near-infrared light to visible or ultraviolet light. These particles are often used for long-term and real-time imaging because they are extremely stable even when subjected to continuous irradiation for a long time. It is now possible to image their movement at the single particle level with a scale of a few nanometers and track their trajectories as a function of time with a scale of a few microseconds. Such UCNP-based single-particle tracking (SPT) technology provides information about the intracellular structures and dynamics in living cells. Thus far, most imaging techniques have been built on fluorescence microscopic techniques (epifluorescence, total internal reflection, etc.). However, two-dimensional (2D) images obtained using these techniques are limited in only being able to visualize those on the focal planes of the objective lens. On the contrary, if three-dimensional (3D) structures and dynamics are known, deeper insights into the biology of the thick cells and tissues can be obtained. In this review, we introduce the status of the fluorescence imaging techniques, discuss the mathematical description of SPT, and outline the past few studies using UCNPs as imaging probes or biologically functionalized carriers. Full article
(This article belongs to the Special Issue Bioactive Nanoparticles)
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18 pages, 11287 KB  
Review
Three-Dimensional Mapping of mRNA Export through the Nuclear Pore Complex
by Steven J. Schnell, Jiong Ma and Weidong Yang
Genes 2014, 5(4), 1032-1049; https://doi.org/10.3390/genes5041032 - 11 Nov 2014
Cited by 11 | Viewed by 10981
Abstract
The locations of transcription and translation of mRNA in eukaryotic cells are spatially separated by the nuclear envelope (NE). Plenty of nuclear pore complexes (NPCs) embedded in the NE function as the major gateway for the export of transcribed mRNAs from the nucleus [...] Read more.
The locations of transcription and translation of mRNA in eukaryotic cells are spatially separated by the nuclear envelope (NE). Plenty of nuclear pore complexes (NPCs) embedded in the NE function as the major gateway for the export of transcribed mRNAs from the nucleus to the cytoplasm. Whereas the NPC, perhaps one of the largest protein complexes, provides a relatively large channel for macromolecules to selectively pass through it in inherently three-dimensional (3D) movements, this channel is nonetheless below the diffraction limit of conventional light microscopy. A full understanding of the mRNA export mechanism urgently requires real-time mapping of the 3D dynamics of mRNA in the NPC of live cells with innovative imaging techniques breaking the diffraction limit of conventional light microscopy. Recently, super-resolution fluorescence microscopy and single-particle tracking (SPT) techniques have been applied to the study of nuclear export of mRNA in live cells. In this review, we emphasize the necessity of 3D mapping techniques in the study of mRNA export, briefly summarize the feasibility of current 3D imaging approaches, and highlight the new features of mRNA nuclear export elucidated with a newly developed 3D imaging approach combining SPT-based super-resolution imaging and 2D-to-3D deconvolution algorithms. Full article
(This article belongs to the Special Issue Mechanisms of mRNA Nuclear Export)
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