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17 pages, 1541 KiB  
Article
Impact of Antiglaucoma Drug Number and Class on Corneal Epithelial Thickness Measured by OCT
by Piotr Miklaszewski, Anna Maria Gadamer, Dominika Janiszewska-Bil, Anita Lyssek-Boroń, Dariusz Dobrowolski, Edward Wylęgała, Beniamin Oskar Grabarek, Michael Janusz Koss and Katarzyna Krysik
Pharmaceuticals 2025, 18(6), 868; https://doi.org/10.3390/ph18060868 - 11 Jun 2025
Viewed by 500
Abstract
Background/Objectives: The corneal epithelium plays a vital role in maintaining corneal transparency and ocular surface integrity. Chronic topical use of antiglaucoma medications may induce epithelial changes, especially with the concurrent use of multiple agents. This study aimed to evaluate the association between the [...] Read more.
Background/Objectives: The corneal epithelium plays a vital role in maintaining corneal transparency and ocular surface integrity. Chronic topical use of antiglaucoma medications may induce epithelial changes, especially with the concurrent use of multiple agents. This study aimed to evaluate the association between the number and class of antiglaucoma medications and central corneal epithelial thickness (CET), measured using a spectral-domain optical coherence tomography (SD-OCT) device. Methods: This cross-sectional study included 456 eyes from 242 adults (median age 72 years), grouped by the number of antiglaucoma agents used (0–4 medications). All pharmacologically treated participants had received the same regimen for ≥6 months. CET was measured using SD-OCT (SOLIX, Optovue). Generalized estimating equations (GEEs) accounted for inter-eye correlation. Two models were constructed: one evaluating specific medication effects and another assessing CET reduction per additional drug used. Age and sex were included as covariates. Results: CET progressively decreased with the number of medications, ranging from 53 µm in controls to 48 µm with quadruple therapy. Multivariable GEE analysis confirmed a cumulative thinning effect, with each additional medication associated with further CET reduction (β = −2.83 to −9.17 µm, p < 0.001). Latanoprost exerted the most pronounced single-drug effect (β = −3.01 µm, p < 0.001). Age was a modest negative predictor, while sex showed no significant effect. Conclusions: The cumulative number and specific class of antiglaucoma medications have a significant impact on corneal epithelial thickness. These results emphasize the need for vigilant ocular surface evaluation in patients on multi-drug regimens and propose CET as a surrogate marker for the burden of topical therapy. Full article
(This article belongs to the Special Issue Recent Advances in Ocular Pharmacology)
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18 pages, 8552 KiB  
Article
Application of a Rational Crystal Contact Engineering Strategy on a Poly(ethylene terephthalate)-Degrading Cutinase
by Brigitte Walla, Anna-Maria Dietrich, Edwin Brames, Daniel Bischoff, Stefanie Fritzsche, Kathrin Castiglione, Robert Janowski, Dierk Niessing and Dirk Weuster-Botz
Bioengineering 2025, 12(6), 561; https://doi.org/10.3390/bioengineering12060561 - 23 May 2025
Viewed by 658
Abstract
Industrial biotechnology offers a potential ecological solution for PET recycling under relatively mild reaction conditions via enzymatic degradation, particularly using the leaf branch compost cutinase (LCC) quadruple mutant ICCG. To improve the efficient downstream processing of this biocatalyst after heterologous gene expression with [...] Read more.
Industrial biotechnology offers a potential ecological solution for PET recycling under relatively mild reaction conditions via enzymatic degradation, particularly using the leaf branch compost cutinase (LCC) quadruple mutant ICCG. To improve the efficient downstream processing of this biocatalyst after heterologous gene expression with a suitable production host, protein crystallization can serve as an effective purification/capture step. Enhancing protein crystallization was achieved in recent studies by introducing electrostatic (and aromatic) interactions in two homologous alcohol dehydrogenases (Lb/LkADH) and an ene reductase (NspER1-L1,5) produced with Escherichia coli. In this study, ICCG, which is difficult to crystallize, was utilized for the application of crystal contact engineering strategies, resulting in ICCG mutant L50Y (ICCGY). Previously focused on the Lys-Glu interaction for the introduction of electrostatic interactions at crystal contacts, the applicability of the engineering strategy was extended here to an Arg-Glu interaction to increase crystallizability, as shown for ICCGY T110E. Furthermore, the rationale of the engineering approach is demonstrated by introducing Lys and Glu at non-crystal contacts or sites without potential interaction partners as negative controls. These resulting mutants crystallized comparably but not superior to the wild-type protein. As demonstrated by this study, crystal contact engineering emerges as a promising approach for rationally enhancing protein crystallization. This advancement could significantly streamline biotechnological downstream processing, offering a more efficient pathway for research and industry. Full article
(This article belongs to the Section Biochemical Engineering)
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20 pages, 290 KiB  
Review
Helicobacter pylori Vaccine: Mechanism of Pathogenesis, Immune Evasion and Analysis of Vaccine Types
by Jingwen Gong, Qing Wang, Xing Chen and Junhui Lu
Vaccines 2025, 13(5), 526; https://doi.org/10.3390/vaccines13050526 - 15 May 2025
Cited by 1 | Viewed by 1530
Abstract
Helicobacter pylori (H. pylori) is a gram-negative, spiral-shaped bacterium that colonizes the human gastric mucosa, leading to various gastric diseases. H. pylori infection has become a pressing public health issue that affects more than 50% of the human population worldwide, almost 40 years [...] Read more.
Helicobacter pylori (H. pylori) is a gram-negative, spiral-shaped bacterium that colonizes the human gastric mucosa, leading to various gastric diseases. H. pylori infection has become a pressing public health issue that affects more than 50% of the human population worldwide, almost 40 years after its discovery. Traditional treatments, based on the use of bismuth-based triple and quadruple therapies, are effective while facing a series of problems, such as difficulty in patient compliance, the rise of antibiotic resistance, and possible recurrence of infection. Therefore, the development of an efficacious vaccine against H. pylori would be extremely urgent. This review mainly elaborates on the pathogenic mechanism and immune evasion mechanism of H. pylori, as well as various strategies adopted in vaccine development, including whole-cell vaccines, subunit vaccines, DNA vaccines, and live vector vaccines. Animal studies and clinical trials demonstrate that H. pylori vaccines significantly reduce bacterial load and provide cellular immunity over some time. Multiple studies have clarified the advantages and limitations of each candidate vaccine. Although the development of H. pylori vaccines provides benefits to reduce the global burden, there are still significant challenges to developing vaccines in safety, efficacy, and availability. Overcoming these challenges, along with the advancement of vaccine technology, can better prevent and treat H. pylori infection. Full article
(This article belongs to the Section Vaccines, Clinical Advancement, and Associated Immunology)
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20 pages, 2736 KiB  
Article
Dysregulated miRNA Expression and Androgen Receptor Loss in Racially Distinct Triple-Negative Breast Cancer
by Shristi Bhattarai, Bruna M. Sugita, Emanuelle Nunes-Souza, Aline S. Fonseca, Darshan Shimoga Chandrashekar, Mahak Bhargava, Luciane R. Cavalli and Ritu Aneja
Int. J. Mol. Sci. 2024, 25(24), 13679; https://doi.org/10.3390/ijms252413679 - 21 Dec 2024
Viewed by 1008
Abstract
Androgen receptor (AR)-negative triple-negative breast cancer (TNBC), often termed quadruple-negative breast cancer (QNBC), disproportionately impacts women of African descent, leading to poorer overall survival (OS). MiRNAs regulate the expression of gene drivers involved in critical signaling pathways in TNBC, such as the AR [...] Read more.
Androgen receptor (AR)-negative triple-negative breast cancer (TNBC), often termed quadruple-negative breast cancer (QNBC), disproportionately impacts women of African descent, leading to poorer overall survival (OS). MiRNAs regulate the expression of gene drivers involved in critical signaling pathways in TNBC, such as the AR gene, and their expression varies across races and breast cancer subtypes. This study investigates whether differentially expressed miRNAs influence AR transcription, potentially contributing to the observed disparities between African American (AA) and European American (EA) QNBC patients. Race-annotated TNBC samples (n = 129) were analyzed for AR expression status and revealed the prevalence of QNBC in AA patients compared to EA (76.6% vs. 57.7%) and a significant association of AR loss with poor survival among AAs. The Cancer Genome Atlas (TCGA) RNA-seq data showed that AAs with TNBC (n = 32) had lower AR mRNA levels than EAs (n = 67). Among TCGA patients in the AR-low group, AAs had significantly poorer OS than EAs. In our cohort, 46 miRNAs exhibited differential expression between AAs and EAs with QNBC. Ten of these miRNAs (miR-1185-5p, miR-1305, miR-3161, miR-3690, miR-494-3p, miR-509-3-5p, miR-619-3p, miR-628-3p, miR-873-5p, and miR-877-5p) were predicted to target the AR gene/signaling. The loss of AR expression is linked to poorer prognoses in AA women. The understanding of the specific miRNAs involved and their regulatory mechanisms on AR expression could provide valuable insights into why AA women are more prone to QNBC. Full article
(This article belongs to the Special Issue Breast Cancer: From Pathophysiology to Novel Therapies)
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14 pages, 2917 KiB  
Article
Numerical Investigation of Non-Equilibrium Condensation in a Supersonic Nozzle Based on Spontaneous Nucleation
by Saman Javadi Kouchaksaraei and Mohammad Akrami
Aerospace 2024, 11(12), 1032; https://doi.org/10.3390/aerospace11121032 - 17 Dec 2024
Cited by 3 | Viewed by 1254
Abstract
Non-equilibrium condensation involves intricate physics, making it crucial to thoroughly investigate the factors that influence it. Understanding these factors is essential for optimizing the system performance and minimizing the negative effects associated with non-equilibrium condensation. This study focused on examining the impact of [...] Read more.
Non-equilibrium condensation involves intricate physics, making it crucial to thoroughly investigate the factors that influence it. Understanding these factors is essential for optimizing the system performance and minimizing the negative effects associated with non-equilibrium condensation. This study focused on examining the impact of various operational conditions in a saturated mode on non-equilibrium condensation within a supersonic nozzle. The operation conditions under investigation involved pressures of 25 kPa, 50 kPa, 75 kPa, and 100 kPa. Each saturation state was examined to assess its effect on various parameters, such as temperature, pressure, liquid mass fraction, droplet radius, nucleation rate, Mach number, and droplet count. A consistent pattern emerged across all samples. As the gas accelerated through the converging section of the nozzle, both pressure and temperature gradually decreased. However, upon reaching the throat and entering the divergent section, a phenomenon known as condensation shock occurred. This shock wave caused a sudden and significant spike in both pressure and temperature. Following the shock, both parameters resumed their downward trend along the remaining length of the nozzle. Interestingly, increasing the initial pressure of the gas led to a less intense condensation shock. Additionally, raising the saturation pressure at the nozzle inlet resulted in larger droplets and a higher concentration of liquid within the gas flow. By quadrupling the inlet saturation pressure from 25 to 100 kPa, a substantial 106.9% increase in droplet radius and a 9.65% increase in liquid mass fraction were observed at the nozzle outlet. Full article
(This article belongs to the Special Issue Innovation and Challenges in Hypersonic Propulsion)
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13 pages, 337 KiB  
Article
Antibiotic Susceptibility-Guided Concomitant Therapy Regimen with Vonoprazan, High-Dose Amoxicillin, Clarithromycin, and Metronidazole for Helicobacter pylori Eradication as Fourth-Line Regimen: An Interventional Study
by Soichiro Sue, Takeshi Sato, Mao Matsubayashi, Hiroaki Kaneko, Kuniyasu Irie and Shin Maeda
Microorganisms 2024, 12(10), 2104; https://doi.org/10.3390/microorganisms12102104 - 21 Oct 2024
Viewed by 1862
Abstract
This is the first registered intervention study for vonoprazan, high-dose amoxicillin, clarithromycin, and metronidazole 14-day concomitant therapy based on a susceptibility test of Helicobacter pylori. We conducted this study as a fourth-line rescue regimen in Japan. Methods: Twenty patients who underwent three [...] Read more.
This is the first registered intervention study for vonoprazan, high-dose amoxicillin, clarithromycin, and metronidazole 14-day concomitant therapy based on a susceptibility test of Helicobacter pylori. We conducted this study as a fourth-line rescue regimen in Japan. Methods: Twenty patients who underwent three rounds of eradication therapies (first- or second-line 7-day triple therapy consisting of amoxicillin and clarithromycin, or metronidazole- and sitafloxacin-based third-line therapy) and had failed eradication based on a urea breath test or fecal antigen test were recruited. All patients underwent endoscopic examination and culture tests before starting eradication therapy. The intervention was concomitant therapy consisting of vonoprazan 20 mg bid, amoxicillin 500 mg qid, clarithromycin 400 mg bid, and metronidazole 250 mg bid for 14 days, which were modified based on the susceptibility test, and the resistant drugs were removed from the regimen. Patients with negative culture results were treated with quadruple therapy. The primary outcome was the eradication rate (UMIN000025765, jRCTs 031180208). Results: The eradication rate of susceptibility-testing-based fourth-line eradication therapy was 63.2% (95%CI: 38.4–83.7%) in intent-to-treat analysis and 70.6% (95%CI: 44.0–89.7%) in per-protocol analysis. Thirteen patients received quadruple therapy, with eradication rates of 61.5% and 75.0%, respectively. No serious adverse events were reported. Conclusions: This vonoprazan-based concomitant therapy modified by the susceptibility test is a potential option as fourth-line eradication after first-line clarithromycin-based 7-day triple, second-line metronidazole-based 7-day triple, and third-line sitafloxacin-based 7-day triple therapy failure. Full article
(This article belongs to the Special Issue Helicobacter pylori Infection: Detection and Novel Treatment)
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19 pages, 781 KiB  
Systematic Review
Insights from Clinical Trials: Evidence-Based Recommendations for Induction Treatment of Newly Diagnosed Transplant-Eligible Multiple Myeloma
by Olga Lytvynova, Jenna Jwayyed, Daniel Pastel, Rohan Prasad, Jack Khouri, Louis Williams, Sandra Mazzoni, Shahzad Raza and Faiz Anwer
Antibodies 2024, 13(4), 80; https://doi.org/10.3390/antib13040080 - 29 Sep 2024
Cited by 1 | Viewed by 2423
Abstract
Multiple myeloma (MM) is a hematological malignancy and poses significant therapeutic challenges. This review synthesizes evidence from pivotal clinical trials to guide induction treatment for transplant-eligible (TE), newly diagnosed MM (NDMM) patients. Emphasizing the evolution from three-drug to four-drug induction therapies, we highlight [...] Read more.
Multiple myeloma (MM) is a hematological malignancy and poses significant therapeutic challenges. This review synthesizes evidence from pivotal clinical trials to guide induction treatment for transplant-eligible (TE), newly diagnosed MM (NDMM) patients. Emphasizing the evolution from three-drug to four-drug induction therapies, we highlight the integration of monoclonal antibodies, particularly CD38 recombinant monoclonal antibody agents, into treatment regimens. This analysis includes a comprehensive literature review of research from major databases and conferences conducted between 2010 and 2023, culminating in the detailed evaluation of 47 studies. The findings underscore the superiority of quadruple regimens in TE NDMM, notably those incorporating daratumumab, in achieving superior responses including progression-free survival (PFS), minimal residual disease (MRD) negativity, objective response rate (ORR), and overall survival (OS) when compared to triple-drug regimens. As treatment regimens evolve with additional agents, the improved outcomes with treatment-related adverse events should be carefully balanced. This review advocates for a paradigm shift towards quadruple induction therapies for TE NDMM, offers a detailed insight into the current landscape of MM treatment, and reinforces a new standard of care. Full article
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18 pages, 3156 KiB  
Article
A New Measure for Quantifying Four-Limb Coordination of Human Gait Based on Mobility Sensors
by Noam Galor, Gabi Zeilig and Meir Plotnik
Sensors 2024, 24(18), 6105; https://doi.org/10.3390/s24186105 - 21 Sep 2024
Cited by 1 | Viewed by 1459
Abstract
Coordinated movement of four limbs is a hallmark of healthy locomotion. No measures exist to quantify four-limb coordination. This study aimed to investigate temporal four-limb coordination and proposed a new metric for quantifying the inter-limb phase of rhythmic locomotion-related movements. Kinetic data of [...] Read more.
Coordinated movement of four limbs is a hallmark of healthy locomotion. No measures exist to quantify four-limb coordination. This study aimed to investigate temporal four-limb coordination and proposed a new metric for quantifying the inter-limb phase of rhythmic locomotion-related movements. Kinetic data of arm and leg movements generated during walking (self-selected speed) from healthy adults were used to extract the phases (φ) between all possible limb pairings. The φ series were used to calculate each pair’s Phase Coordination Index (PCI). The PCI quantifies the accuracy and consistency of generating anti-phased rhythmic movements (lower PCI values mean better coordination). We also calculated the Quadruple-PCI (Q-PCI) by combining all φ values of all limb pairs. We found a significant correlation between the PCI values of all limb pairings and the Q-PCI (pairs involving arms: Pearson’s R > 0.79, p < 0.001; leg–leg: Pearson’s R = 0.3, p < 0.01). The PCI values that involve arms (median values between 6.5% and 8.3%) were significantly higher than the leg–leg PCI (median values between 3.8% and 4.1%), and the Q-PCI (median values between 8.3% and 9.7%) was significantly higher than all other PCI values. We also found a negative correlation between the arm swing amplitude and the PCI values (Spearman’s Rho of different limb pairings ranging from −0.25 to −0.5, p < 0.05), suggesting that higher arm swing amplitude leads to better coordination. Four-limb coordination analysis is a novel method for comprehensive assessment of gait coordination, which is often compromised among persons with disabilities. Full article
(This article belongs to the Special Issue Wearable Sensors for Physical Activity and Healthcare Monitoring)
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28 pages, 2602 KiB  
Review
FOXM1 Transcriptionally Co-Upregulates Centrosome Amplification and Clustering Genes and Is a Biomarker for Poor Prognosis in Androgen Receptor-Low Triple-Negative Breast Cancer
by Padmashree Rida, Sophia Baker, Adam Saidykhan, Isabelle Bown and Nikita Jinna
Cancers 2024, 16(18), 3191; https://doi.org/10.3390/cancers16183191 - 18 Sep 2024
Cited by 1 | Viewed by 2286
Abstract
There are currently no approved targeted treatments for quadruple-negative breast cancer [QNBC; ER/PR/HER2/androgen receptor (AR)], a subtype of triple-negative breast cancer (TNBC). AR-low TNBC is more proliferative and clinically aggressive than AR-high TNBC. Centrosome amplification [...] Read more.
There are currently no approved targeted treatments for quadruple-negative breast cancer [QNBC; ER/PR/HER2/androgen receptor (AR)], a subtype of triple-negative breast cancer (TNBC). AR-low TNBC is more proliferative and clinically aggressive than AR-high TNBC. Centrosome amplification (CA), a cancer hallmark, is rampant in TNBC, where it induces spindle multipolarity-mediated cell death unless centrosome clustering pathways are co-upregulated to avert these sequelae. We recently showed that genes that confer CA and centrosome clustering are strongly overexpressed in AR-low TNBCs relative to AR-high TNBCs. However, the molecular mechanisms that index centrosome clustering to the levels of CA are undefined. We argue that FOXM1, a cell cycle-regulated oncogene, links the expression of genes that drive CA to the expression of genes that act at kinetochores and along microtubules to facilitate centrosome clustering. We provide compelling evidence that upregulation of the FOXM1-E2F1-ATAD2 oncogene triad in AR-low TNBC is accompanied by CA and the co-upregulation of centrosome clustering proteins such as KIFC1, AURKB, BIRC5, and CDCA8, conferring profound dysregulation of cell cycle controls. Targeting FOXM1 in AR-low TNBC may render cancer cells incapable of clustering their centrosomes and impair their ability to generate excess centrosomes. Hence, our review illuminates FOXM1 as a potential actionable target for AR-low TNBC. Full article
(This article belongs to the Special Issue Feature Papers in Section "Cancer Biomarkers" in 2023–2024)
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11 pages, 225 KiB  
Article
Clinical Characteristics of Distinct Subgroups of Patients with Primary Sjögren’s Syndrome Classified by Serological Profiles: A Comparison Study
by Erdal Bodakçi
J. Pers. Med. 2024, 14(9), 967; https://doi.org/10.3390/jpm14090967 - 12 Sep 2024
Cited by 2 | Viewed by 1586
Abstract
Sjögren’s syndrome (SS) is an autoimmune disease characterized by heterogeneous clinical presentation and the presence of various autoantibodies. This study aimed to determine the differences in clinical findings according to antibody positivity in patients with primary Sjögren syndrome (pSS) in the Turkish population. [...] Read more.
Sjögren’s syndrome (SS) is an autoimmune disease characterized by heterogeneous clinical presentation and the presence of various autoantibodies. This study aimed to determine the differences in clinical findings according to antibody positivity in patients with primary Sjögren syndrome (pSS) in the Turkish population. A retrospective study was conducted and 402 patients (378 women and 24 men) with pSS were analyzed. The patients were categorized into three subgroups based on serological tests. These were (1) quadruple seropositivity (positive for anti-Sjögren’s syndrome-related antigen A antibodies (anti-SSA; anti-Ro) and anti-Sjögren’s syndrome-related antigen B antibodies (anti-SSB; anti-La), rheumatoid factor (RF), and antinuclear antibody (ANA); (2) double seropositivity (positive for ANA and anti-SSA/Ro antibodies); and (3) quadruple seronegativity (negative for ANA, RF, anti-SSA/Ro and anti-SSB/La antibodies). The number of quadruple-seropositive patients was 72 (18.6%), double-seropositive 174 (43.2%), and quadruple-seronegative was 85 (21.1%). The age at diagnosis of quadruple-seropositive pSS was 42.4 ± 10.8, which was significantly younger than that of patients with double-seropositive and quadruple-seronegative pSS (p = 0.021, p = 0.112). In terms of organ involvement, salivary gland enlargement, arthralgia, arthritis, Raynaud’s phenomenon, lymphadenopathy, cutaneous vasculitis, interstitial lung disease, neurological involvement, autoimmune thyroiditis, renal interstitial disease, anemia, leukopenia, hypergammaglobulinemia, and hypocomplementemia were more common in quadruple-seropositive patients with pSS than in quadruple-seronegative patients (p < 0.0001). The results of this study confirmed the strong impact of immunological markers on the pSS phenotype at the time of diagnosis. Immunological patterns play a central role in the phenotypic expression of the disease, even during the initial diagnostic phase, and can guide physicians in designing personalized treatment plans for patients with pSS. Full article
(This article belongs to the Section Clinical Medicine, Cell, and Organism Physiology)
21 pages, 5944 KiB  
Review
Gastrointestinal Stromal Tumors (GISTs) in Pediatric Patients: A Case Report and Literature Review
by Tudor-Alexandru Popoiu, Cãtãlin-Alexandru Pîrvu, Cãlin-Marius Popoiu, Emil Radu Iacob, Tamas Talpai, Amalia Voinea, Rãzvan-Sorin Albu, Sorina Tãban, Larisa-Mihaela Bãlãnoiu and Stelian Pantea
Children 2024, 11(9), 1040; https://doi.org/10.3390/children11091040 - 26 Aug 2024
Cited by 1 | Viewed by 2701
Abstract
Gastrointestinal stromal tumors (GISTs) are rare mesenchymal neoplasms that primarily affect adults, with pediatric cases constituting only 0.5–2.7% of the total. Pediatric GISTs present unique clinical, genetic, and pathological features that distinguish them from adult cases. This literature review aims to elucidate these [...] Read more.
Gastrointestinal stromal tumors (GISTs) are rare mesenchymal neoplasms that primarily affect adults, with pediatric cases constituting only 0.5–2.7% of the total. Pediatric GISTs present unique clinical, genetic, and pathological features that distinguish them from adult cases. This literature review aims to elucidate these differences, emphasizing diagnostic and therapeutic challenges. We discuss the resistance of pediatric GISTs to conventional chemotherapy and highlight the importance of surgical intervention, especially in emergency situations involving intra-abdominal bleeding. The review also explores the molecular characteristics of pediatric GISTs, including rare mutations such as quadruple-negative wild-type GIST with an FGF3 gene gain mutation. To illustrate these points, we conclude with a case from our clinic involving a 15-year-old female with multiple CD117-positive gastric GISTs and a quadruple-negative wild-type genetic profile who required urgent surgical intervention following a failed tumor embolization. This case underscores the critical need for early diagnosis and individualized therapeutic strategies combining oncologic and surgical care to improve outcomes in pediatric GIST patients. Full article
(This article belongs to the Special Issue Cutting-Edge Laparoscopic and Thoracoscopic Surgery in Children)
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16 pages, 2006 KiB  
Article
Weakly Supervised Specular Highlight Removal Using Only Highlight Images
by Yuanfeng Zheng, Guangwei Hu, Hao Jiang, Hao Wang and Lihua Wu
Mathematics 2024, 12(16), 2578; https://doi.org/10.3390/math12162578 - 21 Aug 2024
Viewed by 1368
Abstract
Specular highlight removal is a challenging task in the field of image enhancement, while it can significantly improve the quality of image in highlight regions. Recently, deep learning-based methods have been widely adopted in this task, demonstrating excellent performance by training on either [...] Read more.
Specular highlight removal is a challenging task in the field of image enhancement, while it can significantly improve the quality of image in highlight regions. Recently, deep learning-based methods have been widely adopted in this task, demonstrating excellent performance by training on either massive paired data, wherein both the highlighted and highlight-free versions of the same image are available, or unpaired datasets where the one-to-one correspondence is inapplicable. However, it is difficult to obtain the corresponding highlight-free version of a highlight image, as the latter has already been produced under specific lighting conditions. In this paper, we propose a method for weakly supervised specular highlight removal that only requires highlight images. This method involves generating highlight-free images from highlight images with the guidance of masks estimated using non-negative matrix factorization (NMF). These highlight-free images are then fed consecutively into a series of modules derived from a Cycle Generative Adversarial Network (Cycle-GAN)-style network, namely the highlight generation, highlight removal, and reconstruction modules in sequential order. These modules are trained jointly, resulting in a highly effective highlight removal module during the verification. On the specular highlight image quadruples (SHIQ) and the LIME datasets, our method achieves an accuracy of 0.90 and a balance error rate (BER) of 8.6 on SHIQ, and an accuracy of 0.89 and a BER of 9.1 on LIME, outperforming existing methods and demonstrating its potential for improving image quality in various applications. Full article
(This article belongs to the Special Issue Advances in Applied Mathematics in Computer Vision)
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19 pages, 2581 KiB  
Article
Investigating Rural Logistics and Transportation through the Lens of Quadruple Bottom Line Sustainability
by Derya Parmaksız, M. Ali Ülkü and Heidi Weigand
Logistics 2024, 8(3), 81; https://doi.org/10.3390/logistics8030081 - 15 Aug 2024
Cited by 4 | Viewed by 6192
Abstract
Background: An alternative to unsustainable urban developments, rural living is on the rise, but it already has its challenges. To that end, rural logistics and transportation (RLT) calls for a comprehensive analysis of its context, especially in a climate-changed and socially turbulent world. [...] Read more.
Background: An alternative to unsustainable urban developments, rural living is on the rise, but it already has its challenges. To that end, rural logistics and transportation (RLT) calls for a comprehensive analysis of its context, especially in a climate-changed and socially turbulent world. Unlike urban logistics, there is limited focus on RLT in academic literature. However, rural areas’ lack of transportation and limited logistics operations negatively affect rural residents’ daily lives, especially socially disadvantaged groups such as older people, children, women, and low-income households. Methods: This study first identifies the key literature on RLT and sustainability using a systematic literature review. Then, it synthesizes from the extant literature the challenges in RLT and proposed solutions to understand how to improve accessibility and address some barriers to implementation, all through the perspective of quadruple bottom line (QBL) sustainability pillars. Results: The lack of opportunities presented to rural residents due to limited RLT leads to inequality between rural and urban populations, requiring academic attention. Moreover, despite the growing emphasis on sustainability in academic literature, there is a noticeable lack of attention to sustainability in RLT. Conclusions: This study leads policymakers toward a better understanding of rural communities’ complexities, directs practitioners to adopt the QBL perspective in decision-making, and aims to stipulate innovative RLT topics for further research for academicians. Full article
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12 pages, 1402 KiB  
Article
Beyond Triple-Negative: High Prevalence of Quadruple-Negative Breast Cancer in African Americans
by Oluwadamilola Oladeru, Fareed Rajack, Ashwini Esnakula, Tammey J. Naab, Yasmine Kanaan and Luisel Ricks-Santi
Biomedicines 2024, 12(7), 1522; https://doi.org/10.3390/biomedicines12071522 - 9 Jul 2024
Cited by 1 | Viewed by 1988
Abstract
Quadruple-negative breast cancer (QNBC) is a triple-negative breast cancer (TNBC) subtype that lacks expression of the androgen (AR) receptor. Few studies have focused on this highly aggressive breast cancer, portending worse survival rates. We aimed to determine the following: (1) QNBC’s molecular and [...] Read more.
Quadruple-negative breast cancer (QNBC) is a triple-negative breast cancer (TNBC) subtype that lacks expression of the androgen (AR) receptor. Few studies have focused on this highly aggressive breast cancer, portending worse survival rates. We aimed to determine the following: (1) QNBC’s molecular and clinical characteristics and compare them with other subtypes and (2) QNBC’s association with clinicopathological factors and prognostic markers. We performed immunohistochemical evaluations of ARs on tissue tumor microarrays from FFPE tumor blocks of invasive ductal breast carcinomas in 202 African American women. Univariate analysis was performed using the chi-square test, with survival rates calculated using Kaplan–Meier curves. Overall, 75.8% of TNBCs were AR-negative. Compared to the luminal subtypes, TNBC and QNBC tumors were likely to be a higher grade (p < 0.001); HER2+/AR- and QNBCs were also larger than the other subtypes (p < 0.001). They also expressed increasing mean levels of proteins involved in invasion, such as CD44, fascin, and vimentin, as well as decreasing the expression of proteins involved in mammary differentiation, such as GATA3 and mammaglobin. We found no association between QNBC and stage, recurrence-free survival, or overall survival rates. The high prevalence of TNBC AR-negativity in these women could explain observed worse outcomes, supporting the existence of the unique QNBC subtype. Full article
(This article belongs to the Special Issue Molecular Research of Triple-Negative Breast Cancer)
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21 pages, 2513 KiB  
Article
Development of a Bead-Based Multiplex Fluorescent Immunoassay to Detect Antibodies against Maedi-Visna Virus in Sheep
by Anniken Jerre Borge, Barbara Colitti, Sergio Rosati, Anne B. Nordstoga, Britt Gjerset, Kristin Udjus, Chiara Nogarol, Stalin Chellappa, Ingunn Anita Samdal and Kari Lybeck
Animals 2024, 14(10), 1442; https://doi.org/10.3390/ani14101442 - 12 May 2024
Viewed by 1854
Abstract
The Maedi-visna virus (MVV) causes a persistent infection in small ruminants, and its high genetic heterogeneity affects the performance of diagnostic tests when used in different populations. Therefore, the aim of this study was to develop a bead-based multiplex immunoassay tailored to detect [...] Read more.
The Maedi-visna virus (MVV) causes a persistent infection in small ruminants, and its high genetic heterogeneity affects the performance of diagnostic tests when used in different populations. Therefore, the aim of this study was to develop a bead-based multiplex immunoassay tailored to detect antibodies against a Norwegian MVV strain. We used tissue samples from 14 PCR-positive sheep from a recent MVV outbreak in Norway to sequence the viral strain and produced recombinant antigens based on sequences from one animal. The assay included commercial TM-A and recombinant Norwegian p25, p16–25 and SU5 antigens. Cut-off values for each antigen were determined using receiver operating characteristic curves on 40 ELISA-negative and 67 ELISA-positive samples from the outbreak. The intraplate and interplate repeatability were investigated by testing a quadruplicate of five samples over three days, while the analytical sensitivity (aSe) and specificity (aSp) were measured in comparison to a commercial ELISA. The repeatability showed a coefficient of variation below 15% for most positive samples. The aSe was equal or higher for the multiplex assay than the ELISA, and the aSp of each antigen was 91.7, 93.3, 95.0 and 93.3% for p25, p16–25, SU5 and TM-A, respectively. The assay shows promising results; however, further evaluations of diagnostic characteristics are necessary before implementation in the Norwegian surveillance programme. Full article
(This article belongs to the Special Issue Small Ruminants and Lentivirus Research: Future Directions)
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