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Keywords = oxalate–carbonate pathway

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21 pages, 3306 KiB  
Article
Carbonate and Oxalate Crystallization Effected by the Metabolism of Fungi and Bacteria in Various Trophic Conditions: The Case of Penicillium chrysogenum and Penicillium chrysogenum with Bacillus subtilis
by Katerina V. Sazanova, Marina S. Zelenskaya, Alina R. Izatulina, Anatoliy V. Korneev, Dmitry Yu. Vlasov and Olga V. Frank-Kamenetskaya
Crystals 2023, 13(1), 94; https://doi.org/10.3390/cryst13010094 - 4 Jan 2023
Cited by 5 | Viewed by 2918
Abstract
The present work contributed to the patterns of crystallization affected by the metabolism of fungi and bacteria in various trophic conditions and specifically covers the case of Penicillium chrysogenum and P. chrysogenum with Bacillus subtilis. The cultivation of microorganisms was carried out [...] Read more.
The present work contributed to the patterns of crystallization affected by the metabolism of fungi and bacteria in various trophic conditions and specifically covers the case of Penicillium chrysogenum and P. chrysogenum with Bacillus subtilis. The cultivation of microorganisms was carried out on the dolomitic calcite marble in liquid Czapek–Dox nutrient medium with glucose concentrations of 1, 10 and 30 g/L. The study of the crystal component of mycelium formed on the marble surface was supported through powder X-ray diffraction, scanning electron microscopy and energy-dispersive X-ray spectroscopy; the quantitative content of the extracellular polymer substance (EPS) and low-molecular-weight organic acids (LMWOAs) in the medium was determined through chromatography–mass spectrometry (GC-MS). The results obtained clearly demonstrated the unique ability of the fungus P. chrysogenum to not only release organic acids (primarily oxalic), but the EPS also which significantly affected the pH of the culture liquid and, accordingly, the carbonate and oxalate crystallization. Carbonate crystallization manifested in the presence of Bacillus subtilis as well. The transition from oxalate crystallization to carbonate and vice versa could occur with a change in the species composition of the microbial community as well as with a change in the nutritional value medium. Under the conditions closest to natural conditions (glucose content of 1 g/L), through the action of P. chrysogenum, oxalate crystallization occurred, and through the action of P. chrysogenum with B. subtilis, carbonate crystallization was observed. The identified patterns can be used to reveal the role of fungi and bacteria in the oxalate–carbonate pathway. Full article
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16 pages, 3076 KiB  
Article
Selective and Efficient Reduction of Nitrate to Gaseous Nitrogen from Drinking Water Source by UV/Oxalic Acid/Ferric Iron Systems: Effectiveness and Mechanisms
by Zhiyuan Shi, Falu Wang, Qian Xiao, Shuili Yu and Xingli Ji
Catalysts 2022, 12(3), 348; https://doi.org/10.3390/catal12030348 - 18 Mar 2022
Cited by 13 | Viewed by 3122
Abstract
Nitrate (NO3) reduction in water has been receiving increasing attention in water treatment due to its carcinogenic and endocrine-disrupting properties. This study employs a novel advanced reduction process, the UV/oxalic acid/ferric iron systems (UV/C2O42−/Fe3+ [...] Read more.
Nitrate (NO3) reduction in water has been receiving increasing attention in water treatment due to its carcinogenic and endocrine-disrupting properties. This study employs a novel advanced reduction process, the UV/oxalic acid/ferric iron systems (UV/C2O42−/Fe3+ systems), in reducing NO3 due to its high reduction efficiency, excellent selectivity, and low treatment cost. The UV/C2O42−/Fe3+ process reduced NO3 with pseudo-first-order reaction rate constants of 0.0150 ± 0.0013 min−1, minimizing 91.4% of 60 mg/L NO3 and reaching 84.2% of selectivity for gaseous nitrogen after 180 min at pHini. 7.0 and 0.5 mg/L dissolved oxygen (DO). Carbon dioxide radical anion (CO2•−) played a predominant role in reducing NO3. Gaseous nitrogen and NH4+, as well as CO2, were the main nitrogen- and carbon-containing products, respectively, and reduction pathways were proposed accordingly. A suitable level of oxalic acids (3 mM) and NO3 (60 mg/L) was recommended; increasing initial iron concentrations and UV intensity increased NO3 reduction. Instead, increasing the solution pH decreased the reduction, and 0.5–8.0 mg/L DO negligibly affected the process. Moreover, UV/C2O42−/Fe3+ systems were not retarded by 0.1–10 mM SO42− or Cl or 0.1–1.0 mM HCO3 but were prohibited by 10 mM HCO3 and 30 mg-C/L humic acids. There was a lower reduction of NO3 in simulated groundwater (72.8%) than deionized water after 180 min at pHini. 7.0 and 0.5 mg/L DO, which meets the drinking water standard (<10 mg/L N-NO3). Therefore, UV/C2O42−/Fe3+ systems are promising approaches to selectively and efficiently reduce NO3 in drinking water. Full article
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42 pages, 12124 KiB  
Article
Soil Formation and Mass Redistribution during the Holocene Using Meteoric 10Be, Soil Chemistry and Mineralogy
by Alessandra Musso, Dmitry Tikhomirov, Michael L. Plötze, Konrad Greinwald, Anne Hartmann, Clemens Geitner, Fabian Maier, Fanny Petibon and Markus Egli
Geosciences 2022, 12(2), 99; https://doi.org/10.3390/geosciences12020099 - 21 Feb 2022
Cited by 10 | Viewed by 5313
Abstract
Soil development and erosion are important and opposing processes in the evolution of high-mountainous landscapes, though their dynamics are not fully understood. We compared soil development between a calcareous and a siliceous chronosequence in the central Swiss Alps at high altitudes, which both [...] Read more.
Soil development and erosion are important and opposing processes in the evolution of high-mountainous landscapes, though their dynamics are not fully understood. We compared soil development between a calcareous and a siliceous chronosequence in the central Swiss Alps at high altitudes, which both cover soil formation over the Holocene. We calculated element mass balances, long-term erosion rates based on meteoric 10Be and we determined the rates of soil formation. We also analyzed the shifts in the mineralogical composition, weathering indices, the particle size distribution, carbon stocks and oxalate extractable Fe, Al, and Mn. The siliceous soils had high chemical weathering rates at the early stage of soil formation that strongly decreased after a few millennia. The development of calcareous soil was characterized by high carbonate losses and a shift to finer soil texture. Soil erosion hampered the upbuilding of soil horizons in the early stages of soil development, which led to a delay in soil and vegetation development. This study shows how soil formation drivers change over time. In the early stages of soil development, the parent material predominantly drives soil formation while at later stages the vegetation becomes more dominant as it influences surface stability, hydrological pathways, and chemical weathering that determine water drainage and retention. Full article
(This article belongs to the Special Issue Cutting Edge Earth Sciences: Three Decades of Cosmogenic Nuclides)
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19 pages, 19482 KiB  
Article
Molecular Studies on the Nephroprotective Potential of Celastrus paniculatus against Lead-Acetate-Induced Nephrotoxicity in Experimental Rats: Role of the PI3K/AKT Signaling Pathway
by Karunakaran Balaji, Jagadish Vijayakumar, Ponnusamy Kasirajan Sankaran, Sivanesan Senthilkumar, Rajagopalan Vijayaraghavan, Jayaraman Selvaraj and Maria Francis Yuvaraj
Molecules 2021, 26(21), 6647; https://doi.org/10.3390/molecules26216647 - 2 Nov 2021
Cited by 6 | Viewed by 3103
Abstract
Chemicals can induce nephrotoxicity, with damage to different segments of the nephron and deterioration of renal function. Nephrotoxicity due to exposure to a toxin such as carbon tetrachloride, sodium oxalate, or heavy metals is the most common cause of kidney injury. The current [...] Read more.
Chemicals can induce nephrotoxicity, with damage to different segments of the nephron and deterioration of renal function. Nephrotoxicity due to exposure to a toxin such as carbon tetrachloride, sodium oxalate, or heavy metals is the most common cause of kidney injury. The current study aimed to evaluate the protective effects of Celastrus paniculatus seed extract against lead-acetate-induced nephrotoxicity by evaluating the histopathology, immunohistochemistry, ultrastructure, and phosphoinositide 3-kinase (PI3K)/protein kinase B (AKT) signaling pathway. Twenty-four rats were divided into four groups (n = 6 per group): group 1 contained normal animals and served as the control; group 2 received lead acetate (30 mg/kg body weight (b.w.)/day, oral); group 3 received lead acetate and the standard drug N-acetylcysteine (NAC, 200 mg/kg b.w./day, oral); and group 4 received lead acetate and the ethanolic extract of C. paniculatus seed (EECP; 800 mg/kg b.w./day, oral). Treatment was given for 28 consecutive days. The data were analyzed using one-way analysis of variance with SIGMA PLOT 13 using SYSTAT software followed by Newman–Keul’s test for comparison between the groups. EECP ameliorated the adverse changes caused by lead acetate. PI3K and AKT messenger RNA (mRNA) levels were diminished in lead-acetate-treated rats. Treatment with EECP inhibited the occurrence of shrunken cells, the atrophy of glomeruli, and degenerative changes in renal tubules caused by lead acetate. Interestingly, the PI3K and AKT mRNA levels were significantly increased in EECP-treated animals. Our results clearly evidence for the first time that C. paniculatus seed extract inhibits lead-acetate-induced detrimental changes in kidneys by regulating PI3K/AKT signaling pathways. Full article
(This article belongs to the Special Issue Bioactive Molecules for Biodegradation and Antimicrobials)
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20 pages, 2439 KiB  
Article
Global Transcriptional Response of Aspergillus niger to Blocked Active Citrate Export through Deletion of the Exporter Gene
by Thanaporn Laothanachareon, Lyon Bruinsma, Bart Nijsse, Tom Schonewille, Maria Suarez-Diez, Juan Antonio Tamayo-Ramos, Vitor A. P. Martins dos Santos and Peter J. Schaap
J. Fungi 2021, 7(6), 409; https://doi.org/10.3390/jof7060409 - 23 May 2021
Cited by 7 | Viewed by 4021
Abstract
Aspergillus niger is the major industrial citrate producer worldwide. Export as well as uptake of citric acid are believed to occur by active, proton-dependent, symport systems. Both are major bottlenecks for industrial citrate production. Therefore, we assessed the consequences of deleting the citT [...] Read more.
Aspergillus niger is the major industrial citrate producer worldwide. Export as well as uptake of citric acid are believed to occur by active, proton-dependent, symport systems. Both are major bottlenecks for industrial citrate production. Therefore, we assessed the consequences of deleting the citT gene encoding the A. niger citrate exporter, effectively blocking active citrate export. We followed the consumption of glucose and citrate as carbon sources, monitored the secretion of organic acids and carried out a thorough transcriptome pathway enrichment analysis. Under controlled cultivation conditions that normally promote citrate secretion, the knock-out strain secreted negligible amounts of citrate. Blocking active citrate export in this way led to a reduced glucose uptake and a reduced expression of high-affinity glucose transporter genes, mstG and mstH. The glyoxylate shunt was strongly activated and an increased expression of the OAH gene was observed, resulting in a more than two-fold higher concentration of oxalate in the medium. Deletion of citT did not affect citrate uptake suggesting that citrate export and citrate uptake are uncoupled from the system. Full article
(This article belongs to the Special Issue Exploiting Fungal Solutions for Today's Challenges)
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12 pages, 2271 KiB  
Article
Functional Diversity of the Litter-Associated Fungi from an Oxalate-Carbonate Pathway Ecosystem in Madagascar
by Vincent Hervé, Anaële Simon, Finaritra Randevoson, Guillaume Cailleau, Gabrielle Rajoelison, Herintsitohaina Razakamanarivo, Saskia Bindschedler, Eric Verrecchia and Pilar Junier
Microorganisms 2021, 9(5), 985; https://doi.org/10.3390/microorganisms9050985 - 1 May 2021
Cited by 11 | Viewed by 3602
Abstract
The oxalate-carbonate pathway (OCP) is a biogeochemical process linking oxalate oxidation and carbonate precipitation. Currently, this pathway is described as a tripartite association involving oxalogenic plants, oxalogenic fungi, and oxalotrophic bacteria. While the OCP has recently received increasing interest given its potential for [...] Read more.
The oxalate-carbonate pathway (OCP) is a biogeochemical process linking oxalate oxidation and carbonate precipitation. Currently, this pathway is described as a tripartite association involving oxalogenic plants, oxalogenic fungi, and oxalotrophic bacteria. While the OCP has recently received increasing interest given its potential for capturing carbon in soils, there are still many unknowns, especially regarding the taxonomic and functional diversity of the fungi involved in this pathway. To fill this gap, we described an active OCP site in Madagascar, under the influence of the oxalogenic tree Tamarindus indica, and isolated, identified, and characterized 50 fungal strains from the leaf litter. The fungal diversity encompassed three phyla, namely Mucoromycota, Ascomycota, and Basidiomycota, and 23 genera. Using various media, we further investigated their functional potential. Most of the fungal strains produced siderophores and presented proteolytic activities. The majority were also able to decompose cellulose and xylan, but only a few were able to solubilize inorganic phosphate. Regarding oxalate metabolism, several strains were able to produce calcium oxalate crystals while others decomposed calcium oxalate. These results challenge the current view of the OCP by indicating that fungi are both oxalate producers and degraders. Moreover, they strengthen the importance of the role of fungi in C, N, Ca, and Fe cycles. Full article
(This article belongs to the Special Issue Fungal Ecology in Plant Decomposition)
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