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Keywords = extended blastocyst culture

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14 pages, 1184 KB  
Article
Impact of PGT Introduction on IVF Laboratory Workload: Lessons Learned from a Single-Center Experience of 5258 Biopsies over a 10-Year Period
by Stefano Canosa, Luisa Delle Piane, Danilo Cimadomo, Alberto Revelli, Gianluca Gennarelli, Daniela Guidetti, Cristina Garello, Francesca Granella, Francesca Evangelista, Giuseppe Monelli, Lucia Clemente, Antonio Capalbo, Laura Rienzi, Ugo Sorrentino, Daniela Zuccarello and Francesca Bongioanni
Life 2025, 15(9), 1351; https://doi.org/10.3390/life15091351 - 26 Aug 2025
Viewed by 2063
Abstract
The aim of our study was to provide a retrospective single-center experience of the additional workload associated with routine PGT, including embryologist training and suggested staffing levels. A total of 4945 IVF cycles were retrospectively considered, of which 1680 were PGT cycles with [...] Read more.
The aim of our study was to provide a retrospective single-center experience of the additional workload associated with routine PGT, including embryologist training and suggested staffing levels. A total of 4945 IVF cycles were retrospectively considered, of which 1680 were PGT cycles with a total of 5258 biopsied blastocysts. An exponential increase in the proportion of PGTs over OPUs was observed, from 0.2% in 2015 to 72.9% in 2024. The number of viable embryos for biopsy was significantly increased by the systematic adoption of an extended embryo culture and the concomitant transition from a day 2 Double Embryo Transfer (DET) to a day 5 Single Blastocyst Transfer (SET) policy in 2020. In order to cope with the increasing workload, a concomitant increase in the number of embryologists involved in blastocyst biopsy was adopted, with a second embryologist in 2020, a third in 2021, and a fourth in 2022, with a trend comparable to that observed for the proportion of PGT cycles over IVF cycles performed during the study period. The appropriate number of staff required for the IVF laboratory was calculated using the Staffing Model for ART (smART) calculator, based on 12 routine IVF procedures. An optimal balance between operational procedures and staffing levels was achieved when the difference (Δ) was ≤10%, ensuring the efficient maintenance of PGT in the IVF laboratory. Full article
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21 pages, 1417 KB  
Review
Non-Invasive Preimplantation Genetic Testing
by Daniela N. Bakalova, Luis Navarro-Sánchez and Carmen Rubio
Genes 2025, 16(5), 552; https://doi.org/10.3390/genes16050552 - 30 Apr 2025
Cited by 3 | Viewed by 7839
Abstract
To minimise the influence of chromosomal abnormalities during IVF treatment, embryos can be screened before transfer using preimplantation genetic testing. This typically involves an invasive trophectoderm biopsy at the blastocyst stage, where 4–8 cells are collected and analysed. However, emerging evidence indicates that, [...] Read more.
To minimise the influence of chromosomal abnormalities during IVF treatment, embryos can be screened before transfer using preimplantation genetic testing. This typically involves an invasive trophectoderm biopsy at the blastocyst stage, where 4–8 cells are collected and analysed. However, emerging evidence indicates that, as embryos develop in vitro in culture media, they release cell-free DNA into the media, providing an alternative source of genetic material that can be accessed non-invasively. Spent blastocyst media samples that contain embryo cell-free DNA demonstrate high informativity rates and ploidy concordance when compared with the corresponding trophectoderm, inner cell mass, or whole blastocyst results. However, optimising this non-invasive approach requires several changes to embryo culture protocols, including additional embryo washes to tackle contamination and extending embryo culture time to maximise the amount of cell-free DNA released into the culture media. In this review, we discuss this novel non-invasive approach for aneuploidy detection and embryo prioritisation, as well as the current data and future prospects for utilising cell-free DNA analysis to identify structural rearrangements and single gene disorders. Full article
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16 pages, 934 KB  
Article
Temporal Evaluation of a Minimally Invasive Method of Preimplantation Genetic Testing for Aneuploidy (mi-PGT-A) in Human Embryos
by Katharine R. B. Phillips, Alexander G. Kuzma-Hunt, Michael S. Neal, Connie Lisle, Hariharan Sribalachandran, Ronald F. Carter, Shilpa Amin, Megan F. Karnis and Mehrnoosh Faghih
Reprod. Med. 2024, 5(3), 97-112; https://doi.org/10.3390/reprodmed5030011 - 8 Jul 2024
Cited by 2 | Viewed by 4480
Abstract
Preimplantation genetic testing for aneuploidy (PGT-A) has become a useful approach for embryo selection following IVF and ICSI. However, the biopsy process associated with PGT-A is expensive, prone to errors in embryo ploidy determination, and potentially damaging, impacting competence and implantation potential. Therefore, [...] Read more.
Preimplantation genetic testing for aneuploidy (PGT-A) has become a useful approach for embryo selection following IVF and ICSI. However, the biopsy process associated with PGT-A is expensive, prone to errors in embryo ploidy determination, and potentially damaging, impacting competence and implantation potential. Therefore, a less invasive method of PGT-A would be desirable and more cost-effective. Noninvasive methods for PGT-A (ni-PGT-A) have been well-studied but present limitations in terms of cf-DNA origin and diagnostic accuracy. Minimally invasive pre-implantation genetic testing (mi-PGT-A) for frozen-thawed embryo transfer is a promising, less studied approach that utilizes a combination of spent culture media (SCM) and blastocoelic fluid (BF)-derived cell-free (CF)-DNA for genetic testing. This study aimed to optimize the effectiveness of mi-PGT-A for aneuploidy diagnosis by investigating the optimal temporal sequence for this protocol. SCM+BF was collected at either 48 or 72 h of culture after thawing day 3 preimplantation embryos. cf-DNA in the SCM+BF was amplified, analyzed by next-generation sequencing (NGS) and compared with results from the corresponding whole embryos (WEs) obtained from human embryos donated for research. Fifty-three (42 expanded blastocysts, 9 early blastocysts, and 2 morula) WE and SCM+BF samples were analyzed and compared. The overall concordance rate between SCM+BF and WE was 60%. Gender and ploidy concordance improved with extended culture time from 48 h (73% and 45%) to 72 h (100% and 64%), respectively. These results demonstrate that SCM+BF-derived cf-DNA can be successfully used for mi-PGT-A. Our findings indicate that longer embryo culture time prior to SCM+BF-derived cf-DNA analysis improves DNA detection rate and concordance with WEs and decreases the proportion of false positive results. Full article
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14 pages, 2323 KB  
Article
In Vitro-Produced Equine Blastocysts Exhibit Greater Dispersal and Intermingling of Inner Cell Mass Cells than In Vivo Embryos
by Muhammad Umair, Veronica Flores da Cunha Scheeren, Mabel M. Beitsma, Silvia Colleoni, Cesare Galli, Giovanna Lazzari, Marta de Ruijter-Villani, Tom A. E. Stout and Anthony Claes
Int. J. Mol. Sci. 2023, 24(11), 9619; https://doi.org/10.3390/ijms24119619 - 1 Jun 2023
Cited by 9 | Viewed by 3270
Abstract
In vitro production (IVP) of equine embryos is increasingly popular in clinical practice but suffers from higher incidences of early embryonic loss and monozygotic twin development than transfer of in vivo derived (IVD) embryos. Early embryo development is classically characterized by two cell [...] Read more.
In vitro production (IVP) of equine embryos is increasingly popular in clinical practice but suffers from higher incidences of early embryonic loss and monozygotic twin development than transfer of in vivo derived (IVD) embryos. Early embryo development is classically characterized by two cell fate decisions: (1) first, trophectoderm (TE) cells differentiate from inner cell mass (ICM); (2) second, the ICM segregates into epiblast (EPI) and primitive endoderm (PE). This study examined the influence of embryo type (IVD versus IVP), developmental stage or speed, and culture environment (in vitro versus in vivo) on the expression of the cell lineage markers, CDX-2 (TE), SOX-2 (EPI) and GATA-6 (PE). The numbers and distribution of cells expressing the three lineage markers were evaluated in day 7 IVD early blastocysts (n = 3) and blastocysts (n = 3), and in IVP embryos first identified as blastocysts after 7 (fast development, n = 5) or 9 (slow development, n = 9) days. Furthermore, day 7 IVP blastocysts were examined after additional culture for 2 days either in vitro (n = 5) or in vivo (after transfer into recipient mares, n = 3). In IVD early blastocysts, SOX-2 positive cells were encircled by GATA-6 positive cells in the ICM, with SOX-2 co-expression in some presumed PE cells. In IVD blastocysts, SOX-2 expression was exclusive to the compacted presumptive EPI, while GATA-6 and CDX-2 expression were consistent with PE and TE specification, respectively. In IVP blastocysts, SOX-2 and GATA-6 positive cells were intermingled and relatively dispersed, and co-expression of SOX-2 or GATA-6 was evident in some CDX-2 positive TE cells. IVP blastocysts had lower TE and total cell numbers than IVD blastocysts and displayed larger mean inter-EPI cell distances; these features were more pronounced in slower-developing IVP blastocysts. Transferring IVP blastocysts into recipient mares led to the compaction of SOX-2 positive cells into a presumptive EPI, whereas extended in vitro culture did not. In conclusion, IVP equine embryos have a poorly compacted ICM with intermingled EPI and PE cells; features accentuated in slowly developing embryos but remedied by transfer to a recipient mare. Full article
(This article belongs to the Special Issue Embryonic Development and Differentiation)
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12 pages, 2677 KB  
Article
The Landscape of Telomere Length and Telomerase in Human Embryos at Blastocyst Stage
by Fang Wang, David H. McCulloh, Kasey Chan, Ashley Wiltshire, Caroline McCaffrey, James A. Grifo and David L. Keefe
Genes 2023, 14(6), 1200; https://doi.org/10.3390/genes14061200 - 30 May 2023
Cited by 7 | Viewed by 2988
Abstract
The telomere length of human blastocysts exceeds that of oocytes and telomerase activity increases after zygotic activation, peaking at the blastocyst stage. Yet, it is unknown whether aneuploid human embryos at the blastocyst stage exhibit a different profile of telomere length, telomerase gene [...] Read more.
The telomere length of human blastocysts exceeds that of oocytes and telomerase activity increases after zygotic activation, peaking at the blastocyst stage. Yet, it is unknown whether aneuploid human embryos at the blastocyst stage exhibit a different profile of telomere length, telomerase gene expression, and telomerase activity compared to euploid embryos. In present study, 154 cryopreserved human blastocysts, donated by consenting patients, were thawed and assayed for telomere length, telomerase gene expression, and telomerase activity using real-time PCR (qPCR) and immunofluorescence (IF) staining. Aneuploid blastocysts showed longer telomeres, higher telomerase reverse transcriptase (TERT) mRNA expression, and lower telomerase activity compared to euploid blastocysts. The TERT protein was found in all tested embryos via IF staining with anti-hTERT antibody, regardless of ploidy status. Moreover, telomere length or telomerase gene expression did not differ in aneuploid blastocysts between chromosomal gain or loss. Our data demonstrate that telomerase is activated and telomeres are maintained in all human blastocyst stage embryos. The robust telomerase gene expression and telomere maintenance, even in aneuploid human blastocysts, may explain why extended in vitro culture alone is insufficient to cull out aneuploid embryos during in vitro fertilization. Full article
(This article belongs to the Special Issue Genetics and Genomics of Female Reproduction)
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14 pages, 1360 KB  
Review
Succinate as a New Actor in Pluripotency and Early Development?
by Damien Detraux and Patricia Renard
Metabolites 2022, 12(7), 651; https://doi.org/10.3390/metabo12070651 - 15 Jul 2022
Cited by 7 | Viewed by 4764
Abstract
Pluripotent cells have been stabilized from pre- and post-implantation blastocysts, representing respectively naïve and primed stages of embryonic stem cells (ESCs) with distinct epigenetic, metabolic and transcriptomic features. Beside these two well characterized pluripotent stages, several intermediate states have been reported, as well [...] Read more.
Pluripotent cells have been stabilized from pre- and post-implantation blastocysts, representing respectively naïve and primed stages of embryonic stem cells (ESCs) with distinct epigenetic, metabolic and transcriptomic features. Beside these two well characterized pluripotent stages, several intermediate states have been reported, as well as a small subpopulation of cells that have reacquired features of the 2C-embryo (2C-like cells) in naïve mouse ESC culture. Altogether, these represent a continuum of distinct pluripotency stages, characterized by metabolic transitions, for which we propose a new role for a long-known metabolite: succinate. Mostly seen as the metabolite of the TCA, succinate is also at the crossroad of several mitochondrial biochemical pathways. Its role also extends far beyond the mitochondrion, as it can be secreted, modify proteins by lysine succinylation and inhibit the activity of alpha-ketoglutarate-dependent dioxygenases, such as prolyl hydroxylase (PHDs) or histone and DNA demethylases. When released in the extracellular compartment, succinate can trigger several key transduction pathways after binding to SUCNR1, a G-Protein Coupled Receptor. In this review, we highlight the different intra- and extracellular roles that succinate might play in the fields of early pluripotency and embryo development. Full article
(This article belongs to the Special Issue The Factors Governing Cell Fate and Metabolism)
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33 pages, 979 KB  
Review
Stem Cell-Based Trophoblast Models to Unravel the Genetic Causes of Human Miscarriages
by Tatiana V. Nikitina and Igor N. Lebedev
Cells 2022, 11(12), 1923; https://doi.org/10.3390/cells11121923 - 14 Jun 2022
Cited by 11 | Viewed by 5993
Abstract
Miscarriage affects approximately 15% of clinically recognized pregnancies, and 1–3% of couples experience pregnancy loss recurrently. Approximately 50–60% of miscarriages result from chromosomal abnormalities, whereas up to 60% of euploid recurrent abortions harbor variants in candidate genes. The growing number of detected genetic [...] Read more.
Miscarriage affects approximately 15% of clinically recognized pregnancies, and 1–3% of couples experience pregnancy loss recurrently. Approximately 50–60% of miscarriages result from chromosomal abnormalities, whereas up to 60% of euploid recurrent abortions harbor variants in candidate genes. The growing number of detected genetic variants requires an investigation into their role in adverse pregnancy outcomes. Since placental defects are the main cause of first-trimester miscarriages, the purpose of this review is to provide a survey of state-of-the-art human in vitro trophoblast models that can be used for the functional assessment of specific abnormalities/variants implicated in pregnancy loss. Since 2018, when primary human trophoblast stem cells were first derived, there has been rapid growth in models of trophoblast lineage. It has been found that a proper balance between self-renewal and differentiation in trophoblast progenitors is crucial for the maintenance of pregnancy. Different responses to aneuploidy have been shown in human embryonic and extra-embryonic lineages. Stem cell-based models provide a powerful tool to explore the effect of a specific aneuploidy/variant on the fetus through placental development, which is important, from a clinical point of view, for deciding on the suitability of embryos for transfer after preimplantation genetic testing for aneuploidy. Full article
(This article belongs to the Special Issue Placental Development in Health and Disease)
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