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Keywords = Streptomyces alfalfae

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20 pages, 4784 KiB  
Article
Short-Term Application of Alfalfa Green Manure Increases Maize Yield and Soil Fertility While Altering Microbial Communities in Karst Yellow Clay Soil
by Xiaoye Gao, Shimei Yang, Yan He, Qiumei Zhao and Tao Zhang
Microorganisms 2025, 13(7), 1445; https://doi.org/10.3390/microorganisms13071445 - 21 Jun 2025
Viewed by 245
Abstract
Green manure effectively improves soil nutrients and crop yields, yet its partial substitution for chemical nitrogen fertilizer (CF) in maize systems remains underexplored in ecologically fragile Karst landscapes. To assess the effect of alfalfa green manure on maize yield, soil nutrients, enzymes, and [...] Read more.
Green manure effectively improves soil nutrients and crop yields, yet its partial substitution for chemical nitrogen fertilizer (CF) in maize systems remains underexplored in ecologically fragile Karst landscapes. To assess the effect of alfalfa green manure on maize yield, soil nutrients, enzymes, and microorganisms, we conducted a two-year field experiment comprising eight treatments: four CF levels (100%, 80%, 60%, and 0% of recommended CF) applied alone or combined with alfalfa green manure (CF100, AL_CF100, CF80, AL_CF80, CF60, AL_CF60, CF0, AL_CF0). The results showed that maize grain yield decreased with the sole reduction of chemical N fertilizer. Compared to the CF100 treatment, the AL_CF100 and AL_CF80 treatments significantly increased grain yield by an average of 21.8% and 16.9%, respectively. Additionally, the AL_CF60 treatment maintained maize grain yield in 2020 and significantly increased it in 2021. The AL_CF100 treatment significantly enhanced soil available N (AN) content, while soil Olsen-P (SOP) content and soil quality index (SQI) were significantly improved in the AL_CF100, AL_CF80, and AL_CF60 treatments. Alfalfa green manure application had no significant effect on soil bacterial and fungal communities. However, the CF rates positively influenced the relative abundances of bacterial phyla (Bacteroidota, Myxococcota, and Patescibacteria) and genera (Intrasporangium, Streptomyces, and Quadrisphaera), as well as fungal genera (Exophiala and Setophoma). α-Diversity analysis revealed that partial substitution of CF with alfalfa green manure did not significantly affect soil bacterial diversity (Ace, Shannon, and Sobs indices) or richness (Chao value). In contrast, chemical N fertilizer rates significantly altered the β-diversity of both bacteria and fungi. The soil AN, AK, sucrase activity, and the relative abundances of Bacteroidota, Streptomyces, and Instrasporangium showed significant positive relationship with maize grain yield. This study demonstrates that substituting 20% CF with alfalfa green manure optimizes maize productivity while enhancing soil health in Karst agroecosystems. Full article
(This article belongs to the Section Plant Microbe Interactions)
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20 pages, 6660 KiB  
Article
Leguminous Green Manure Intercropping Promotes Soil Health in a Citrus (Citrus reticulata) Orchard
by Yuxin Xie, Yulin Jing, Yajie Wang, Rongchun Zheng, Qiurui Xu, Zhenyu Sun and Tingyu Duan
Agriculture 2024, 14(11), 1897; https://doi.org/10.3390/agriculture14111897 - 26 Oct 2024
Cited by 2 | Viewed by 1638
Abstract
The intercropping of green manure is an important and sustainable production method in citrus orchards (Citrus reticulata). However, few studies focus on the impact of annual and perennial green manure on soil health, particularly soil microbiome and properties in acid soil. Our [...] Read more.
The intercropping of green manure is an important and sustainable production method in citrus orchards (Citrus reticulata). However, few studies focus on the impact of annual and perennial green manure on soil health, particularly soil microbiome and properties in acid soil. Our research objective was to explore the potential effects on soil health by intercropping with annual and perennial leguminous green manures in acid soil citrus orchards of southwestern China. The leguminous green manures used were alfalfa (Medicago sativa) and hairy vetch (Vicia villosa). The results showed that intercropping with green manure increased the total nitrogen, nitrate nitrogen, and available phosphorous in the soil by 48.67~74.67%, 50.00~96.67%, and 44.48~45.04%, respectively. Intercropping with alfalfa significantly increased the activity of soil sucrase 63.75%, and intercropping with hairy vetch increased the activity of β-1,4-glucosidase 44.38% in the soil compared to the monoculture treatment. Intercropping hairy vetch and alfalfa altered the diversity and composition of the soil microbial community and enriched the soil with beneficial fungi and bacteria, including Mortierella and Streptomyces. The richness increased by 58.72% and 17.90% in alfalfa intercropping treatment. In conclusion, intercropping leguminous green manure improved the nutrients and activity of the enzymes in the soil and enriched the antagonistic microbiome in the soil, promoting soil health in the citrus orchard. Full article
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11 pages, 2629 KiB  
Article
In Vitro Screening of Endophytic Micromonospora Strains Associated with White Clover for Antimicrobial Activity against Phytopathogenic Fungi and Promotion of Plant Growth
by Wojciech Sokołowski, Sylwia Wdowiak-Wróbel, Monika Marek-Kozaczuk and Michał Kalita
Agronomy 2024, 14(5), 1062; https://doi.org/10.3390/agronomy14051062 - 17 May 2024
Cited by 2 | Viewed by 1733
Abstract
Bacteria belonging to the genus Micromonospora are recognized as microorganisms with the potential to be used in biotechnology processes, given their beneficial influence on plant growth and the biocontrol of phytopathogens. In this study, nineteen Micromonospora isolates originating from the root nodules of [...] Read more.
Bacteria belonging to the genus Micromonospora are recognized as microorganisms with the potential to be used in biotechnology processes, given their beneficial influence on plant growth and the biocontrol of phytopathogens. In this study, nineteen Micromonospora isolates originating from the root nodules of white clover plants were taxonomically assigned based on the phylogenetic analysis of the 16S rRNA gene and four housekeeping genes. The antifungal properties of the bacteria against phytopathogenic Botrytis cinerea, Fusarium oxysporum, Fusarium equiseti, Sclerotinia sclerotiorum, and Verticillium albo-atrum were tested with the agar plug test and the dual culture test. The ability to produce various metallophores was determined with the agar plug diffusion test on modified chrome azurol S (CAS) agar medium. International Streptomyces Project-2 medium (ISP2) broth amended with 0.2% L-tryptophan was used to indicate the bacterial ability to produce auxins. The strains belonging to M. tulbaghiae, M. inaquosa, and M. violae showed in vitro potential as antimicrobial agents against the tested fungi. M. inaquosa strain 152, M. violae strain 126, M. violae strain 66, and M. violae strain 45 were recognized as the most efficient metallophore producers. M. alfalfae strain 55 and M. lupini strain 5052 were identified as the most promising auxin compound producers and, therefore, show potential as plant-growth-promoting bacteria. Full article
(This article belongs to the Special Issue Research Progress on Pathogenicity of Fungi in Crops—2nd Edition)
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15 pages, 9852 KiB  
Article
Antagonistic Activity of Streptomyces alfalfae 11F against Fusarium Wilt of Watermelon and Transcriptome Analysis Provides Insights into the Synthesis of Phenazine-1-Carboxamide
by Dan Dong, Maoying Li, Taotao Zhang, Zhenfeng Niu, Guoping Xue, Hongmei Bai, Wenyu Zhao, Jiajia Yu, Wei Jiang and Huiling Wu
Plants 2023, 12(22), 3796; https://doi.org/10.3390/plants12223796 - 8 Nov 2023
Cited by 4 | Viewed by 1948
Abstract
Streptomyces alfalfa strain 11F has inhibitory effects on many phytopathogenic fungi and improves the establishment and biomass yield of switchgrass. However, the antagonistic effects of strain 11F on Fusarium wilt of watermelon and its secondary metabolites that contribute to its biocontrol activity are [...] Read more.
Streptomyces alfalfa strain 11F has inhibitory effects on many phytopathogenic fungi and improves the establishment and biomass yield of switchgrass. However, the antagonistic effects of strain 11F on Fusarium wilt of watermelon and its secondary metabolites that contribute to its biocontrol activity are poorly understood. We evaluated the antagonistic and growth-promoting effects of strain 11F and conducted a transcriptome analysis to identify the metabolites contributing to antifungal activity. Strain 11F had marked inhibitory effects on six fungal pathogens. The incidence of Fusarium wilt of watermelon seedlings was decreased by 46.02%, while watermelon seedling growth was promoted, as indicated by plant height (8.7%), fresh weight (23.1%), and dry weight (60.0%). Clean RNA-sequencing data were annotated with 7553 functional genes. The 2582 differentially expressed genes (DEGs) detected in the Control vs. Case 2 comparison were divided into 42 subcategories of the biological process, cellular component, and molecular function Gene Ontology categories. Seven hundred and forty functional genes (55.47% of the DEGs) were assigned to Kyoto Encyclopedia of Genes and Genomes metabolic pathways, reflecting the complexity of the strain 11F metabolic regulatory system. The expression level of the gene phzF, which encodes an enzyme essential for phenazine-1-carboxylic acid (PCA) synthesis, was downregulated 3.7-fold between the 24 h and 48 h fermentation time points, suggesting that strain 11F can produce phenazine compounds. A phenazine compound from 11F was isolated and identified as phenazine-1-carboxamide (PCN), which contributed to the antagonistic activity against Fusarium oxysporum f. sp. niveum. PCA was speculated to be the synthetic precursor of PCN. The downregulation in phzF expression might be associated with the decrease in PCA accumulation and the increase in PCN synthesis in strain 11F from 24 to 48 h. Streptomyces alfalfae 11F protects watermelon seedlings from Fusarium wilt of watermelon and promotes seedling growth. The transcriptome analysis of strain 11F provides insights into the synthesis of PCN, which has antifungal activity against F. oxysporum f. sp. niveum of watermelon. Full article
(This article belongs to the Special Issue Embracing Systems Thinking in Crop Protection Science)
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17 pages, 5167 KiB  
Article
Response Surface Methodology (RSM) Mediated Optimization of Medium Components for Mycelial Growth and Metabolites Production of Streptomyces alfalfae XN-04
by Jing Chen, Xingjie Lan, Ruimin Jia, Lifang Hu and Yang Wang
Microorganisms 2022, 10(9), 1854; https://doi.org/10.3390/microorganisms10091854 - 16 Sep 2022
Cited by 33 | Viewed by 4427
Abstract
Streptomyces alfalfae XN-04 has been reported for the production of antifungal metabolites effectively to control Fusarium wilt of cotton, caused by Fusarium oxysporum f. sp. vasinfectum (Fov). In this study, we used integrated statistical experimental design methods to investigate the optimized [...] Read more.
Streptomyces alfalfae XN-04 has been reported for the production of antifungal metabolites effectively to control Fusarium wilt of cotton, caused by Fusarium oxysporum f. sp. vasinfectum (Fov). In this study, we used integrated statistical experimental design methods to investigate the optimized liquid fermentation medium components of XN-04, which can significantly increase the antifungal activity and biomass of XN-04. Seven variables, including soluble starch, KNO3, soybean cake powder, K2HPO4, MgSO4·7H2O, CaCO3 and FeSO4·7H2O, were identified as the best ingredients based on one-factor-at-a-time (OFAT) method. The results of Plackett–Burman Design (PBD) showed that soluble starch, soybean cake powder and K2HPO4 were the most significant variables among the seven variables. The steepest climbing experiment and response surface methodology (RSM) were performed to determine the interactions among these three variables and fine-tune the concentrations. The optimal compositions of medium were as follows: soluble starch (26.26 g/L), KNO3 (1.00 g/L), soybean cake powder (23.54 g/L), K2HPO4 (0.27 g/L), MgSO4·7H2O (0.50 g/L), CaCO3 (1.00 g/L) and FeSO4·7H2O (0.10 g/L). A verification experiment was then carried out under the optimized conditions, and the results revealed the mycelial dry weight of S. alfalfae XN-04 reaching 6.61 g/L. Compared with the initial medium, a 7.47-fold increase in the biomass was achieved using the optimized medium. Moreover, the active ingredient was purified from the methanol extract of S. alfalfae XN-04 mycelium and then identified as roflamycoin (a polyene macrolide antibiotic). The results may provide new insights into the development of S. alfalfae XN-04 fermentation process and the control of the Fusarium wilt of cotton and other plant diseases. Full article
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