Search Results (6)

Bacterial blight (BB) disease is a serious stress that affects up to 80% of rice yield. Utilizing an elite resistant variety was previously thought to be an alternative way to control disease outbreaks. The indigenous upland rice variety ULR207 is a high-potential donor for the BB resistance breeding program. However, the quantitative trait loci (QTLs) associated with bacterial blight resistance in this variety have not yet been discovered. Therefore, QTLs associated with BB resistance need to be identified. In this study, we identified the QTLs associated with BB resistance in the F_2:3 population crossed between the BB resistance variety ULR207 and Maled Phai, as well as a susceptible variety, via QTL-seq analysis and bulk-segregant analysis. We found a new QTL-associated BB resistance locus (qBBchr8) mapped on chromosome 8. Five positions were candidates, including Os08g0110700, Os08g0115200, Os08g0131300, Os08g0139500, and Os08g0163900. Afterwards, Kompetitive Allele-Specific PCR (KASP) markers specific to the SNP variant and the position of each gene were designed. These markers, associated with the disease lesion length phenotype, were validated with another 178 individual plants of the F₂ population via single-marker analysis. This analysis revealed that the position Os08g0110700 was the strongest locus, with a PVE of 15.00%. The results suggest that this KASP SNP marker could be used to improve elite rice for BB resistance. Full article

Excessive application of a chemical fertilizer during rice cultivation leads to soil infertility and increases production costs. An alternative way to reduce over-fertilization is to partially or fully replace the fertilizer with microbes that promote the growth and production of plants. This study aimed to investigate the Maled Phai rice cultivar (Oryza sativa L.) in a field experiment with two fungi strains. Rhizophagus variabilis KS-02 and Trichoderma zelobreve PBMP16 were selected as inocula and compared with non-R. variabilis KS-02 and non-T. zelobreve PBMP16, acting as controls, one without synthetic fertilizer and one with synthetic NPK fertilizer. The field experiment was conducted in a Randomized Complete Block design with four replications. Growth and yield parameters were determined in the plant tissues and roots, and bioactive compounds were determined in the rice seeds. The results show the presence of T. zelobreve PBMP16 and R. variabilis KS-02 colonization in the plant roots at the harvest stage. A single inoculum of both R. variabilis KS-02 and T. zelobreve PBMP16 significantly increased most of the plant growth performance and yield parameters, as well as the concentrations of bioactive compounds. Remarkably, such effects were more apparent than those observed with the use of a chemical fertilizer. Thus, a single inoculum of R. variabilis KS-02 or T. zelobreve PBMP16 and the co-inoculation of both have the potential to increase the grain yield and bioactive compounds of Maled Phai under field conditions. Full article

Bacterial blight (BB) caused by Xanthomonas oryzae pv. Oryzae (Xoo) is a serious disease of rice worldwide that can reduce crop yield and affect food insecurity. A rice resistance variety is an alternate way to solve this problem. The broad-spectrum resistance (BSR) of ULR207 is important for durable resistance to several of the Xoo isolates. However, the inheritance of this resistance gene in ULR207 must be known before it can be utilized. Thus, this study aimed to survey the BB resistance gene with reference to the BB resistance gene for identification of non-analogous or analogous genes and confirmation of a broad-spectrum resistance, to investigate the gene effect, the number of genes, and the heritability of the BB resistance gene in the ULR207 variety. Six populations of two crosses (Maled Phai × ULR207 and RD6 × ULR207), i.e., ULR207 (Donor parent), Maled Phai and RD6 (Recurrent parent), F₁, F₂, BC₁P₁, and BC₁P₂ were constructed. These materials were evaluated for BB resistance by clipping methods under greenhouse conditions using a virulence isolate of a pathogen in Thailand. The results showed that ULR207 exhibited the strongest against BB with 0.8 of BSR with low area under the disease progress curve (AUDPC). Molecular screening for surveying of the BB resistance gene in ULR207 revealed a non-analogous resistance gene with resistance check varieties. The phenotype of the disease lesion length of F₂ and BC₁P₂ populations exhibited a ratio of 1:3 and 1:1 (resistant: susceptible), respectively, revealing a single recessive gene in both crosses. The scaling test parameters A, B, and C were non-significant (p < 0.01), indicating that variation in data was sufficiently explained by additive (d) and dominance (h) components. The gene action of ULR207 was controlled by additive gene action. Heritability of the two crosses, Maled Phai x ULR207 and RD6 x ULR207, exhibited high values with 0.817 and 0.716, whereas the numbers of the genes were 1.4 and 1.2, respectively. The result indicated that the breeding strategy could be employed in early generations when using ULR207 as a new source of bacterial blight resistance. Full article

There is an increasing interest in finding eco-friendly and safe approaches to increase agricultural productivity and deliver healthy foods. Arbuscular mycorrhizal fungi (AMF) and endophytic fungi (EPF) are important components of sustainable agriculture in view of their ability to increase productivity and various plant secondary metabolites with health-promoting effects. In a pot experiment, our main research question was to evaluate the additive and synergistic effects of an AMF and four root-endophytic fungi on plant performance and on the accumulation of health-promoting secondary compounds. Plant growth varied between the treatments with both single inoculants and co-inoculation of an AMF and four EPF strains. We found that inoculation with a single EPF positively affected the growth and biomass production of most of the plant-endophyte consortia examined. The introduction of AMF into this experiment (dual inoculation) had a beneficial effect on plant growth and yield. AMF, Rhizophagus variabilis KS-02 co-inoculated with EPF, Trichoderma zelobreve PBMP16 increased the highest biomass, exceeding the growth rate of non-inoculated plants. Co-inoculated R. variabilis KS-02 and T. zelobreve PBMP16 had significantly greater beneficial effects on almost all aspects of plant growth, photosynthesis-related parameters, and yield. It also promoted root growth quality and plant nutrient uptake. The phenolic compounds, anthocyanin, and antioxidant capacity in rice seeds harvested from plants co-inoculated with AMF and EPF were dramatically increased compared with those from non-inoculated plants. In conclusion, our results indicated that EPF and AMF contributed to symbiosis in Maled Phai cultivar and were coordinately involved in promoting plant growth performance under a pot trial. Full article

Rice (Oryza sativa L.) is one of the most popular cereal crops, being consumed by almost half of the world’s population. Among several cultivars widely distributed in Thailand, Maled Phai is a Thai pigmented-upland rice with exceptionally high nutritional value and high demand in the local Thai market. This study aimed to investigate the feasibility of producing plant growth-promoting properties (PGP) and enhancing the accumulation of phytochemicals in Maled Phai rice seeds of endophytic fungi isolated from upland black rice. Among a total of 56 isolates, the 4 most effective PGP isolates were identified as Trichoderma zelobreve PBMP16, Talaromyces pinophilus PBMP28, Aspergillus flavus KKMP34, and Trichoderma sp. PBMP4 based on their morphological characteristics and multigene (ITS, rpb2, tef-1, CaM, and BenA) phylogenetic analyses. These four endophytic fungi could promote plant growth parameters under greenhouse conditions. Outstandingly, upland rice inoculated with Tr. zelobreve PBMP16 had a significant increase in total seed weight, root length, phenolic compounds, anthocyanin, antioxidants, and N uptake, which were higher than those of the noninoculated control, and even better than the chemical fertilizer. Overall, this report shows that endophytic fungi efficiently promoted growth and increased the phenolic compounds, anthocyanin, and antioxidants of Maled Phai rice. Full article

Black rice (Oryza sativa L.) contains high concentrations of bioactive compounds that are associated with human-health benefits. Arbuscular mycorrhizal fungi (AMF) can increase plant performance and concentrations of these bioactive compounds. In a pot experiment, the effects of four different species of AMF (Claroideoglomus etunicatum; Rhizophagus variabilis; Rhizophagus nov. spec.; Acaulospora longula) were assessed on growth performance, grain yield, concentrations of phenolic compounds and anthocyanin, and antioxidant activity of two black-rice cultivars. The experiment was a completely randomized factorial design with two factors, viz. cultivar (Niew Dam Hmong and Maled Phai) and treatment (four different species of AMF and two non-inoculated treatments, without and with mineral fertilizer). Results showed that cultivar, treatment, and their interaction were almost always significant sources of variation for both plant performance parameters and concentrations of bioactive compounds. Maled Phai showed higher performance and higher concentrations of phenolics and anthocyanins but lower antioxidant activity than Niew Dam Hmong. The non-inoculated treatment without mineral fertilizer showed the lowest performance. The non-inoculated treatment with mineral fertilizer resulted in larger root and shoot biomass than the mycorrhizal treatments, but grain yield was higher in the mycorrhizal treatments. Inoculation with R. variabilis resulted in the highest concentration of phenolics and anthocyanins. We conclude that R. variabilis was the best inoculum for increasing grain yield and bioactive compounds, especially in Maled Phai. Full article