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Keywords = Leptothrix sp.

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9 pages, 2184 KB  
Article
Dissociation and Re-Aggregation of Multicell-Ensheathed Fragments Responsible for Rapid Production of Massive Clumps of Leptothrix Sheaths
by Tatsuki Kunoh, Noriyuki Nagaoka, Ian R. McFarlane, Katsunori Tamura, Mohamed Y. El-Naggar, Hitoshi Kunoh and Jun Takada
Biology 2016, 5(3), 32; https://doi.org/10.3390/biology5030032 - 1 Aug 2016
Cited by 8 | Viewed by 6097
Abstract
Species of the Fe/Mn-oxidizing bacteria Leptothrix produce tremendous amounts of microtubular, Fe/Mn-encrusted sheaths within a few days in outwells of groundwater that can rapidly clog water systems. To understand this mode of rapid sheath production and define the timescales involved, behaviors of sheath-forming [...] Read more.
Species of the Fe/Mn-oxidizing bacteria Leptothrix produce tremendous amounts of microtubular, Fe/Mn-encrusted sheaths within a few days in outwells of groundwater that can rapidly clog water systems. To understand this mode of rapid sheath production and define the timescales involved, behaviors of sheath-forming Leptothrix sp. strain OUMS1 were examined using time-lapse video at the initial stage of sheath formation. OUMS1 formed clumps of tangled sheaths. Electron microscopy confirmed the presence of a thin layer of bacterial exopolymer fibrils around catenulate cells (corresponding to the immature sheath). In time-lapse videos, numerous sheath filaments that extended from the periphery of sheath clumps repeatedly fragmented at the apex of the same fragment, the fragments then aggregated and again elongated, eventually forming a large sheath clump comprising tangled sheaths within two days. In this study, we found that fast microscopic fragmentation, dissociation, re-aggregation and re-elongation events are the basis of the rapid, massive production of Leptothrix sheaths typically observed at macroscopic scales. Full article
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17 pages, 3313 KB  
Article
Abiotic Deposition of Fe Complexes onto Leptothrix Sheaths
by Tatsuki Kunoh, Hideki Hashimoto, Ian R. McFarlane, Naoaki Hayashi, Tomoko Suzuki, Eisuke Taketa, Katsunori Tamura, Mikio Takano, Mohamed Y. El-Naggar, Hitoshi Kunoh and Jun Takada
Biology 2016, 5(2), 26; https://doi.org/10.3390/biology5020026 - 3 Jun 2016
Cited by 14 | Viewed by 6042
Abstract
Bacteria classified in species of the genus Leptothrix produce extracellular, microtubular, Fe-encrusted sheaths. The encrustation has been previously linked to bacterial Fe oxidases, which oxidize Fe(II) to Fe(III) and/or active groups of bacterial exopolymers within sheaths to attract and bind aqueous-phase inorganics. When [...] Read more.
Bacteria classified in species of the genus Leptothrix produce extracellular, microtubular, Fe-encrusted sheaths. The encrustation has been previously linked to bacterial Fe oxidases, which oxidize Fe(II) to Fe(III) and/or active groups of bacterial exopolymers within sheaths to attract and bind aqueous-phase inorganics. When L. cholodnii SP-6 cells were cultured in media amended with high Fe(II) concentrations, Fe(III) precipitates visibly formed immediately after addition of Fe(II) to the medium, suggesting prompt abiotic oxidation of Fe(II) to Fe(III). Intriguingly, these precipitates were deposited onto the sheath surface of bacterial cells as the population was actively growing. When Fe(III) was added to the medium, similar precipitates formed in the medium first and were abiotically deposited onto the sheath surfaces. The precipitates in the Fe(II) medium were composed of assemblies of globular, amorphous particles (ca. 50 nm diameter), while those in the Fe(III) medium were composed of large, aggregated particles (≥3 µm diameter) with a similar amorphous structure. These precipitates also adhered to cell-free sheaths. We thus concluded that direct abiotic deposition of Fe complexes onto the sheath surface occurs independently of cellular activity in liquid media containing Fe salts, although it remains unclear how this deposition is associated with the previously proposed mechanisms (oxidation enzyme- and/or active group of organic components-involved) of Fe encrustation of the Leptothrix sheaths. Full article
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15 pages, 8007 KB  
Article
Direct Adherence of Fe(III) Particles onto Sheaths of Leptothrix sp. Strain OUMS1 in Culture
by Tatsuki Kunoh, Hideki Hashimoto, Tomoko Suzuki, Naoyuki Hayashi, Katsunori Tamura, Mikio Takano, Hitoshi Kunoh and Jun Takada
Minerals 2016, 6(1), 4; https://doi.org/10.3390/min6010004 - 18 Jan 2016
Cited by 13 | Viewed by 5788
Abstract
Leptothrix species, one of the Fe/Mn-oxidizing bacteria, oxidize Fe(II) and produce extracellular, microtubuar, Fe-encrusted sheaths. Since protein(s) involved in Fe(II) oxidation is excreted from Leptothrix cells, the oxidation from Fe(II) to Fe(III) and subsequent Fe(III) deposition to sheaths have been thought to occur [...] Read more.
Leptothrix species, one of the Fe/Mn-oxidizing bacteria, oxidize Fe(II) and produce extracellular, microtubuar, Fe-encrusted sheaths. Since protein(s) involved in Fe(II) oxidation is excreted from Leptothrix cells, the oxidation from Fe(II) to Fe(III) and subsequent Fe(III) deposition to sheaths have been thought to occur in the vicinity or within the sheaths. Previously, Fe(III) particles generated in MSVP medium amended with Fe(II) salts by abiotic oxidation were directly recruited onto cell-encasing and/or -free sheaths of L. cholodnii SP-6. In this study, whether this direct Fe(III) adherence to sheaths also occurs in silicon-glucose-peptone (SGP) medium amended with Fe(0) (SGP + Fe) was investigated using another strain of Leptothrix sp., OUMS1. Preparation of SGP + Fe with Fe powder caused turbidity within a few hours due to abiotic generation of Fe(III) particles via Fe(II), and the medium remained turbid until day 8. When OUMS1 was added to SGP + Fe, the turbidity of the medium cleared within 35 h as Fe(III) particles adhered to sheaths. When primitive sheaths, cell-killed, cell-free, or lysozyme/EDTA/SDS- and proteinase K-treated sheath remnants were mixed with Fe(III) particles, the particles immediately adhered to each. Thus, vital activity of cells was not required for the direct Fe(III) particle deposition onto sheaths regardless of Leptothrix strains. Full article
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11 pages, 1888 KB  
Article
Use of Iron Powder to Obtain High Yields of Leptothrix Sheaths in Culture
by Tomoko Suzuki, Tatsuki Kunoh, Daisuke Nakatsuka, Hideki Hashimoto, Katsunori Tamura, Hitoshi Kunoh and Jun Takada
Minerals 2015, 5(2), 335-345; https://doi.org/10.3390/min5020335 - 4 Jun 2015
Cited by 12 | Viewed by 7010
Abstract
The Leptothrix species, Fe-oxidizing bacteria, produce an extracellular, microtubular sheath with a complicated organic–inorganic hybrid nature. We have discovered diverse industrial functions for this material, e.g., electrode material for Li-ion batteries, catalyst enhancers, pigments, plant growth promoters, and plant protectants. To consistently obtain [...] Read more.
The Leptothrix species, Fe-oxidizing bacteria, produce an extracellular, microtubular sheath with a complicated organic–inorganic hybrid nature. We have discovered diverse industrial functions for this material, e.g., electrode material for Li-ion batteries, catalyst enhancers, pigments, plant growth promoters, and plant protectants. To consistently obtain material with the qualitative and quantitative stability needed for industrial applications, we focused on developing an optimum culture system for sheath synthesis by the Leptothrix sp. strain OUMS1. Although we have used Fe plates as an Fe source in the liquid silicon-glucose-peptone medium (SGP), the plates do not yield a consistent quality or precise mass, and formation of Fe-encrusted sheath is restricted to a surface of the plates, which limits harvest yield. In this study, to obtain a high yield of sheaths, we cultured OUMS1 in SGP supplemented with Fe powders. The addition of Fe powders to the medium (up to 14.0 g/L) did not adversely influence growth of OUMS1. The final yield of sheaths was about 10-fold greater than in the Fe plate culture. The sheaths also maintained a microtubular form and crystalline texture similar to those produced on Fe plates in SGP. The results proved the usefulness of Fe powder for consistently high yields of Fe-encrusted sheaths of stable quality. Full article
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17 pages, 1933 KB  
Article
Treatment of Leptothrix Cells with Ultrapure Water Poses a Threat to Their Viability
by Tatsuki Kunoh, Tomoko Suzuki, Tomonori Shiraishi, Hitoshi Kunoh and Jun Takada
Biology 2015, 4(1), 50-66; https://doi.org/10.3390/biology4010050 - 27 Jan 2015
Cited by 12 | Viewed by 8778
Abstract
The genus Leptothrix, a type of Fe/Mn-oxidizing bacteria, is characterized by its formation of an extracellular and microtubular sheath. Although almost all sheaths harvested from natural aquatic environments are hollow, a few chained bacterial cells are occasionally seen within some sheaths of [...] Read more.
The genus Leptothrix, a type of Fe/Mn-oxidizing bacteria, is characterized by its formation of an extracellular and microtubular sheath. Although almost all sheaths harvested from natural aquatic environments are hollow, a few chained bacterial cells are occasionally seen within some sheaths of young stage. We previously reported that sheaths of Leptothrix sp. strain OUMS1 cultured in artificial media became hollow with aging due to spontaneous autolysis within the sheaths. In this study, we investigated environmental conditions that lead the OUMS1 cells to die. Treatment of the cells with ultrapure water or acidic buffers (pH 6.0) caused autolysis of the cells. Under these conditions, the plasma membrane and cytoplasm of cells were drastically damaged, resulting in leakage of intracellular electrolytes and relaxation of genomic DNA. The autolysis was suppressed by the presence of Ca2+. The hydrolysis of peptidoglycan by the lysozyme treatment similarly caused autolysis of the cells and was suppressed also by the presence of Ca2+. However, it remains unclear whether the acidic pH-dependent autolysis is attributable to damage of peptidoglycan. It was observed that L. discophora strain SP-6 cells also underwent autolysis when suspended in ultrapure water; it is however, uncertain whether this phenomenon is common among other members of the genus Leptothrix. Full article
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13 pages, 1521 KB  
Article
Silicon-Rich, Iron Oxide Microtubular Sheath Produced by an Iron-Oxidizing Bacterium, Leptothrix sp. Strain OUMS1, in Culture
by Hiromichi Ishihara, Hideki Hashimoto, Eisuke Taketa, Tomoko Suzuki, Kyoko Mandai, Hitoshi Kunoh and Jun Takada
Minerals 2014, 4(3), 565-577; https://doi.org/10.3390/min4030565 - 27 Jun 2014
Cited by 15 | Viewed by 9007
Abstract
This study aimed to manipulate the texture and elemental composition of the novel sheaths produced by the iron-oxidizing bacterium Leptothrix in culture by altering components of the medium. When previously isolated strain OUMS1 was cultured in media (pH 7.0 throughout incubation) containing various [...] Read more.
This study aimed to manipulate the texture and elemental composition of the novel sheaths produced by the iron-oxidizing bacterium Leptothrix in culture by altering components of the medium. When previously isolated strain OUMS1 was cultured in media (pH 7.0 throughout incubation) containing various levels of Si on a rotary shaker at 20 °C and 70 rpm for 14 days, the strain was able to reproduce in media with up to 300 ppm Si, and the hollow microtubular architecture of the sheath was maintained even at 300 ppm Si. The constitutional iron oxide phase changed from poorly crystalline lepidocrocite at 0 ppm Si to X-ray diffraction (XRD)-amorphous 2-line ferrihydrite at 100–300 ppm via their mixture phase with intermediate Si content (Si-30 and -50 ppm). The results strongly indicate that the chemical character and crystallinity of the sheath texture can be regulated by culture conditions, especially components of the medium. Full article
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11 pages, 6086 KB  
Article
Autolysis of Bacterial Cells Leads to Formation of Empty Sheaths by Leptothrix spp.
by Tomoko Suzuki, Hiromichi Ishihara, Kazuhiro Toyoda, Tomonori Shiraishi, Hitoshi Kunoh and Jun Takada
Minerals 2013, 3(2), 247-257; https://doi.org/10.3390/min3020247 - 20 Jun 2013
Cited by 10 | Viewed by 9619
Abstract
The aquatic, Fe-oxidizing bacteria Leptothrix spp. produce uniquely shaped extracellular sheaths composed of organic bacterial polymers encrusted with inorganic elements from its aquatic environments. At the initial stage of sheath formation, bacterial cells were aligned in the sheath, but later most sheaths became [...] Read more.
The aquatic, Fe-oxidizing bacteria Leptothrix spp. produce uniquely shaped extracellular sheaths composed of organic bacterial polymers encrusted with inorganic elements from its aquatic environments. At the initial stage of sheath formation, bacterial cells were aligned in the sheath, but later most sheaths became empty. Here, we studied the mechanism of sheath hollowing by examining an isolate of Leptothrix sp. strain OUMS1 cultured in either artificial medium or natural groundwater. After 3 days in the medium, most sheaths at the initial stage surrounded a line of live cells, while some cells in the line were dead regardless of their position in a sheath. In sheaths where cells and/or their remnants were barely distinguishable by differential interference contrast microscopy (DIC), a vital stain and a stain specific for nucleic acids occasionally revealed dead cells and/or nucleic acid remnants, while sheaths that lacked a positive response to these reagents looked transparent when viewed with DIC. In specimens cultured in the medium for 7 days, dead cells increased in number regardless of their position in the sheath. Almost the same phenomena occurred in specimens cultured in natural groundwater until day 7. Transmission electron microscopy (TEM) showed that cells degenerated, leading to autolysis of bacterial cells in the sheath. These observations led us to conclude that autolysis of bacterial cells could be a major cause of sheath hollowing. Full article
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9 pages, 687 KB  
Article
Initial Parallel Arrangement of Extracellular Fibrils Holds a Key for Sheath Frame Construction by Leptothrix sp. Strain OUMS1
by Hiromichi Ishihara, Tomoko Suzuki, Hideki Hashimoto, Hitoshi Kunoh and Jun Takada
Minerals 2013, 3(1), 73-81; https://doi.org/10.3390/min3010073 - 22 Feb 2013
Cited by 10 | Viewed by 6477
Abstract
Early stages of sheath formation by Leptothrix sp. strain OUMS1 and its derivative sheathless mutant grown in media with or without Fe were examined by light and electron microscopy. Results showed that the initial parallel arrangement of fibrils excreted from the cells holds [...] Read more.
Early stages of sheath formation by Leptothrix sp. strain OUMS1 and its derivative sheathless mutant grown in media with or without Fe were examined by light and electron microscopy. Results showed that the initial parallel arrangement of fibrils excreted from the cells holds a key for subsequent construction of the sheath frame and that aqueous-phase Fe interacts with excreted fibrils whether fibrils are parallel-arranged or simply-intermingled. Full article
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11 pages, 419 KB  
Article
A Novel Method for Culturing of Leptothrix sp. Strain OUMS1 in Natural Conditions
by Tomoko Suzuki, Hiromichi Ishihara, Mitsuaki Furutani, Tomonori Shiraishi, Hitoshi Kunoh and Jun Takada
Minerals 2012, 2(2), 118-128; https://doi.org/10.3390/min2020118 - 23 May 2012
Cited by 13 | Viewed by 8343
Abstract
Although some strains of Leptothrix spp. isolated from aquatic environments have been characterized by culturing them in laboratory conditions, they often show morphological and chemical features distinct from those found in natural environments. To resolve this discrepancy, a novel cultivation method was devised [...] Read more.
Although some strains of Leptothrix spp. isolated from aquatic environments have been characterized by culturing them in laboratory conditions, they often show morphological and chemical features distinct from those found in natural environments. To resolve this discrepancy, a novel cultivation method was devised for culturing such strains in natural groundwater. Leptothrix sp. strain OUMS1 was pre-cultured in a medium lacking Fe for 2 days, and then injected into a small dialysis tube bag and immersed in a container with continuously flowing groundwater for 1–3 and 14 days. Microscopic analysis of the initial phase of sheath formation and arbitrary comparisons with medium cultures revealed that in groundwater the surface coat of the sheath comprised much thinner fibrils, and an inner sheath wall that was much thinner and more indistinct compared with medium cultures. These differences were probably attributable to poorer secretion from the cell surface in groundwater conditions. A nutrient-rich medium likely activates cell metabolism and promotes secretion, resulting in a thicker inner sheath wall and thicker outer coat fibrils. Aqueous-phase Fe was deposited on immature sheaths in a similar manner in both cultures. These results indicate that laboratory culture of isolated microbes does not always reflect their characteristics in natural environments. Full article
(This article belongs to the Special Issue Advances in Biominerals)
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10 pages, 2536 KB  
Article
Initial Assemblage of Bacterial Saccharic Fibrils and Element Deposition to Form an Immature Sheath in Cultured Leptothrix sp. Strain OUMS1
by Mitsuaki Furutani, Tomoko Suzuki, Hiromichi Ishihara, Hideki Hashimoto, Hitoshi Kunoh and Jun Takada
Minerals 2011, 1(1), 157-166; https://doi.org/10.3390/min1010157 - 14 Dec 2011
Cited by 28 | Viewed by 8414
Abstract
In an aquatic environment, the genus Leptothrix produces an extracellular Fe- or Mn-encrusted tubular sheath composed of a complex hybrid of bacterial exopolymers and aqueous-phase inorganic elements. This ultrastructural study investigated initial assemblage of bacterial saccharic fibrils and subsequent deposition of aqueous-phase inorganic [...] Read more.
In an aquatic environment, the genus Leptothrix produces an extracellular Fe- or Mn-encrusted tubular sheath composed of a complex hybrid of bacterial exopolymers and aqueous-phase inorganic elements. This ultrastructural study investigated initial assemblage of bacterial saccharic fibrils and subsequent deposition of aqueous-phase inorganic elements to form the immature sheath skeleton of cultured Leptothrix sp. strain OUMS1. After one day of culture, a globular and/or thread-like secretion was observed on the surface of the bacterial cell envelope, and secreted bodies were transported across the intervening space away from the cell to form an immature sheath skeleton comprising assembled and intermingled fibrils. Energy dispersive X-ray microanalysis and specific Bi-staining detected a distinguishable level of P, trace Si, and a notable amount of carbohydrates in the skeleton, but not Fe. By the second day, the skeleton was prominently thickened with an inner layer of almost parallel aligned fibrils, along with low level of Fe deposition, whereas an outer intermingled fibrous layer exhibited heavy deposition of Fe along with significant deposition of P and Si. These results indicate that basic sheath-construction proceeds in two steps under culture conditions: an initial assemblage of bacterial saccharic fibrils originated from the cell envelope and the subsequent deposition of aqueous-phase Fe, P, and Si. Full article
(This article belongs to the Special Issue Advances in Biominerals)
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