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Keywords = AISID

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9 pages, 1453 KB  
Communication
AI-Based Protein Interaction Screening and Identification (AISID)
by Zheng-Qing Fu, Hansen L. Sha and Bingdong Sha
Int. J. Mol. Sci. 2022, 23(19), 11685; https://doi.org/10.3390/ijms231911685 - 2 Oct 2022
Cited by 3 | Viewed by 3847
Abstract
In this study, we presented an AISID method extending AlphaFold-Multimer’s success in structure prediction towards identifying specific protein interactions with an optimized AISIDscore. The method was tested to identify the binding proteins in 18 human TNFSF (Tumor Necrosis Factor superfamily) members for each [...] Read more.
In this study, we presented an AISID method extending AlphaFold-Multimer’s success in structure prediction towards identifying specific protein interactions with an optimized AISIDscore. The method was tested to identify the binding proteins in 18 human TNFSF (Tumor Necrosis Factor superfamily) members for each of 27 human TNFRSF (TNF receptor superfamily) members. For each TNFRSF member, we ranked the AISIDscore among the 18 TNFSF members. The correct pairing resulted in the highest AISIDscore for 13 out of 24 TNFRSF members which have known interactions with TNFSF members. Out of the 33 correct pairing between TNFSF and TNFRSF members, 28 pairs could be found in the top five (including 25 pairs in the top three) seats in the AISIDscore ranking. Surprisingly, the specific interactions between TNFSF10 (TNF-related apoptosis-inducing ligand, TRAIL) and its decoy receptors DcR1 and DcR2 gave the highest AISIDscore in the list, while the structures of DcR1 and DcR2 are unknown. The data strongly suggests that AlphaFold-Multimer might be a useful computational screening tool to find novel specific protein bindings. This AISID method may have broad applications in protein biochemistry, extending the application of AlphaFold far beyond structure predictions. Full article
(This article belongs to the Special Issue Recent Advances in Biomolecular Recognition II)
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18 pages, 6453 KB  
Article
The Performance Prediction of Electrical Discharge Machining of AISI D6 Tool Steel Using ANN and ANFIS Techniques: A Comparative Study
by Hamed H. Pourasl, Mousa Javidani, Vahid M. Khojastehnezhad and Reza Vatankhah Barenji
Crystals 2022, 12(3), 343; https://doi.org/10.3390/cryst12030343 - 2 Mar 2022
Cited by 22 | Viewed by 4066
Abstract
AISI-D6 steel is widely used in the creation of dies and molds. In the present paper, first the electrical discharge machining (EDM) of the aforementioned material is performed with a testing plan of 32 trials. Then, artificial neural networks (ANN) and adaptive neuro-fuzzy [...] Read more.
AISI-D6 steel is widely used in the creation of dies and molds. In the present paper, first the electrical discharge machining (EDM) of the aforementioned material is performed with a testing plan of 32 trials. Then, artificial neural networks (ANN) and adaptive neuro-fuzzy inference system (ANFIS) were applied to predict the outputs. The effects of some significant operational parameters—specifically pulse on-time (Ton), pulse current (I), and voltage (V)—on the performance measures of EDM processes such as the material removal rate (MRR), tool wear ratio (TWR), and average surface roughness (Ra) are extracted. To lead the process operators, process plans (i.e., parameter–effect correlations) are created. The outcomes exposed the upper values of pulse on-time caused by higher amounts of MRR and Ra, and likewise lower volumes of TWR. Furthermore, growing the pulse current resulted in upper volumes of the material removal rate, tool wear ratio, and surface roughness. Besides, the higher input voltage resulted in a lower amount of MRR, TWR, and Ra. The estimation models developed by using experimental data recounting MRR, TWR, and Ra. The root means the square error was used to determine the error of training models. Furthermore, the estimated outcomes based on the models have been proven with an unseen validation set of experiments. They are found to be in decent agreement with the experimental issues. The investigation shows the powerful learning capability of an ANFIS model and its advantage in terms of modeling complex linear machining processes. Full article
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14 pages, 2223 KB  
Article
CAD-Based 3D-FE Modelling of AISI-D3 Turning with Ceramic Tooling
by Panagiotis Kyratsis, Anastasios Tzotzis, Angelos Markopoulos and Nikolaos Tapoglou
Machines 2021, 9(1), 4; https://doi.org/10.3390/machines9010004 - 1 Jan 2021
Cited by 24 | Viewed by 4754
Abstract
In this study, the development of a 3D Finite Element (FE) model for the turning of AISI-D3 with ceramic tooling is presented, with respect to four levels of cutting speed, feed, and depth of cut. The Taguchi method was employed in order to [...] Read more.
In this study, the development of a 3D Finite Element (FE) model for the turning of AISI-D3 with ceramic tooling is presented, with respect to four levels of cutting speed, feed, and depth of cut. The Taguchi method was employed in order to create the orthogonal array according to the variables involved in the study, reducing this way the number of the required simulation runs. Moreover, the possibility of developing a prediction model based on well-established statistical tools such as the Response Surface Methodology (RSM) and the Analysis of Variance (ANOVA) was examined, in order to further investigate the relationship between the cutting speed, feed, and depth of cut, as well as their influence on the produced force components. The findings of this study point out an increased correlation between the experimental results and the simulated ones, with a relative error below 10% for most tests. Similarly, the values derived from the developed statistical model indicate a strong agreement with the equivalent numerical values due to the verified adequacy of the statistical model. Full article
(This article belongs to the Section Advanced Manufacturing)
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17 pages, 7375 KB  
Article
Parametric Optimization of Trochoidal Step on Surface Roughness and Dish Angle in End Milling of AISID3 Steel Using Precise Measurements
by Santhakumar J and Mohammed Iqbal U
Materials 2019, 12(8), 1335; https://doi.org/10.3390/ma12081335 - 24 Apr 2019
Cited by 34 | Viewed by 6345
Abstract
Tool steel play a vital role in modern manufacturing industries due to its excellent properties. AISI D3 is a cold work tool steel which possess high strength, more hardenability and good wear resistance properties. It has a wide variety of applications in automobile [...] Read more.
Tool steel play a vital role in modern manufacturing industries due to its excellent properties. AISI D3 is a cold work tool steel which possess high strength, more hardenability and good wear resistance properties. It has a wide variety of applications in automobile and tool and die making industries such as blanking and forming tools, high stressed cutting, deep drawing and press tools. The novel ways of machining these steels and finding out the optimum process parameters to yield good output is of practical importance in the field of research. This research work explores an attempt to identify the optimized process parameter combinations in end milling of AISI D3 steel to yield low surface roughness and maximum dish angle using trochoidal milling tool path, which is considered as a novelty in this study. 20 experimental trials based on face centered central composite design (CCD) of response surface methodology (RSM) were executed by varying the input process factors such as cutting speed, feed rate and trochoidal step. Analysis of variance (ANOVA) was adopted to study the significance of selected process parameters and its relative interactions on the performance measures. Desirability-based multiple objective optimization was performed and the mathematical models were developed for prediction purposes. The developed mathematical model was statistically significant with optimum conditions of cutting speed of 41m/min, feed rate of 120 mm/min and trochoidal step of 0.9 mm. It was also found that the deviation between the experimental and predicted values is 6.10% for surface roughness and 1.33% for dish angle, respectively. Full article
(This article belongs to the Special Issue Machining—Recent Advances, Applications and Challenges)
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