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Authors = Davide Pupo

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26 pages, 1502 KiB  
Review
Visual Perception and Pre-Attentive Attributes in Oncological Data Visualisation
by Roberta Fusco, Vincenza Granata, Sergio Venanzio Setola, Davide Pupo, Teresa Petrosino, Ciro Paolo Lamanna, Mimma Castaldo, Maria Giovanna Riga, Michele A. Karaboue, Francesco Izzo and Antonella Petrillo
Bioengineering 2025, 12(7), 782; https://doi.org/10.3390/bioengineering12070782 - 18 Jul 2025
Viewed by 387
Abstract
In the era of precision medicine, effective data visualisation plays a pivotal role in supporting clinical decision-making by translating complex, multidimensional datasets into intuitive and actionable insights. This paper explores the foundational principles of visual perception, with a specific focus on pre-attentive attributes [...] Read more.
In the era of precision medicine, effective data visualisation plays a pivotal role in supporting clinical decision-making by translating complex, multidimensional datasets into intuitive and actionable insights. This paper explores the foundational principles of visual perception, with a specific focus on pre-attentive attributes such as colour, shape, size, orientation, and spatial position, which are processed automatically by the human visual system. Drawing from cognitive psychology and perceptual science, we demonstrate how these attributes can enhance the clarity and usability of medical visualisations, reducing cognitive load and improving interpretive speed in high-stakes clinical environments. Through detailed case studies and visual examples, particularly within the field of oncology, we highlight best practices and common pitfalls in the design of dashboards, nomograms, and interactive platforms. We further examine the integration of advanced tools—such as genomic heatmaps and temporal timelines—into multidisciplinary workflows to support personalised care. Our findings underscore that visually intelligent design is not merely an aesthetic concern but a critical factor in clinical safety, efficiency, and communication, advocating for user-centred and evidence-based approaches in the development of health data interfaces. Full article
(This article belongs to the Special Issue Mathematical Models for Medical Diagnosis and Testing)
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11 pages, 1844 KiB  
Article
Atypical Ductal Hyperplasia and Lobular In Situ Neoplasm: High-Risk Lesions Challenging Breast Cancer Prevention
by Luca Nicosia, Luciano Mariano, Giuseppe Pellegrino, Federica Ferrari, Filippo Pesapane, Anna Carla Bozzini, Samuele Frassoni, Vincenzo Bagnardi, Davide Pupo, Giovanni Mazzarol, Elisa De Camilli, Claudia Sangalli, Massimo Venturini, Maria Pizzamiglio and Enrico Cassano
Cancers 2024, 16(4), 837; https://doi.org/10.3390/cancers16040837 - 19 Feb 2024
Cited by 1 | Viewed by 2631
Abstract
This retrospective study investigates the histopathological outcomes, upgrade rates, and disease-free survival (DFS) of high-risk breast lesions, including atypical ductal hyperplasia (ADH or DIN1b) and lobular in situ neoplasms (LIN), following Vacuum-Assisted Breast Biopsy (VABB) and surgical excision. The study addresses the challenge [...] Read more.
This retrospective study investigates the histopathological outcomes, upgrade rates, and disease-free survival (DFS) of high-risk breast lesions, including atypical ductal hyperplasia (ADH or DIN1b) and lobular in situ neoplasms (LIN), following Vacuum-Assisted Breast Biopsy (VABB) and surgical excision. The study addresses the challenge posed by these lesions due to their association with synchronous or adjacent Breast Cancer (BC) and increased future BC risk. The research, comprising 320 patients who underwent stereotactic VABB, focuses on 246 individuals with a diagnosis of ADH (120) or LIN (126) observed at follow-up. Pathological assessments, categorized by the UK B-coding system, were conducted, and biopsy samples were compared with corresponding excision specimens to determine upgrade rates for in situ or invasive carcinoma. Surgical excision was consistently performed for diagnosed ADH or LIN. Finally, patient follow-ups were assessed and compared between LIN and ADH groups to identify recurrence signs, defined as histologically confirmed breast lesions on either the same or opposite side. The results reveal that 176 (71.5%) patients showed no upgrade post-surgery, with ADH exhibiting a higher upgrade rate to in situ pathology than LIN1 (Atypical Lobular Hyperplasia, ALH)/LIN2 (Low-Grade Lobular in situ Carcinoma, LCIS) (38% vs. 20%, respectively, p-value = 0.002). Considering only patients without upgrade, DFS at 10 years was 77%, 64%, and 72% for ADH, LIN1, and LIN2 patients, respectively (p-value = 0.92). The study underscores the importance of a multidisciplinary approach, recognizing the evolving role of VABB. It emphasizes the need for careful follow-up, particularly for lobular lesions, offering valuable insights for clinicians navigating the complex landscape of high-risk breast lesions. The findings advocate for heightened awareness and vigilance in managing these lesions, contributing to the ongoing refinement of clinical strategies in BC care. Full article
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13 pages, 2683 KiB  
Review
A Pictorial Exploration of Mammary Paget Disease: Insights and Perspectives
by Luciano Mariano, Luca Nicosia, Davide Pupo, Antonia Maria Olivieri, Sofia Scolari, Filippo Pesapane, Antuono Latronico, Anna Carla Bozzini, Nicola Fusco, Marta Cruz Blanco, Giovanni Mazzarol, Giovanni Corso, Viviana Enrica Galimberti, Massimo Venturini, Maria Pizzamiglio and Enrico Cassano
Cancers 2023, 15(21), 5276; https://doi.org/10.3390/cancers15215276 - 3 Nov 2023
Cited by 7 | Viewed by 4824
Abstract
Mammary Paget disease (MPD) is a rare condition primarily affecting adult women, characterized by unilateral skin changes in the nipple–areolar complex (NAC) and frequently associated with underlying breast carcinoma. Histologically, MPD is identified by large intraepidermal epithelial cells (Paget cells) with distinct characteristics. [...] Read more.
Mammary Paget disease (MPD) is a rare condition primarily affecting adult women, characterized by unilateral skin changes in the nipple–areolar complex (NAC) and frequently associated with underlying breast carcinoma. Histologically, MPD is identified by large intraepidermal epithelial cells (Paget cells) with distinct characteristics. Immunohistochemical profiles aid in distinguishing MPD from other skin conditions. Clinical evaluation and imaging techniques, including magnetic resonance imaging (MRI), are recommended if MPD is suspected, although definitive diagnosis always requires histological examination. This review delves into the historical context, epidemiology, pathogenesis, clinical manifestations, and diagnosis of MPD, emphasizing the need for early detection. The classification of MPD based on pathogenesis is explored, shedding light on its varied presentations. Treatment options, including mastectomy and breast-conserving surgery, are discussed with clear guidelines for different scenarios. Adjuvant therapies are considered, particularly in cases with underlying breast cancer. Prognostic factors are outlined, underlining the importance of early intervention. Looking to the future, emerging techniques, like liquid biopsy, new immunohistochemical and molecular markers, and artificial intelligence-based image analysis, hold the potential to transform MPD diagnosis and treatment. These innovations offer hope for early detection and improved patient care, though validation through large-scale clinical trials is needed. Full article
(This article belongs to the Section Cancer Epidemiology and Prevention)
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13 pages, 923 KiB  
Review
Future Directions in the Assessment of Axillary Lymph Nodes in Patients with Breast Cancer
by Filippo Pesapane, Luciano Mariano, Francesca Magnoni, Anna Rotili, Davide Pupo, Luca Nicosia, Anna Carla Bozzini, Silvia Penco, Antuono Latronico, Maria Pizzamiglio, Giovanni Corso and Enrico Cassano
Medicina 2023, 59(9), 1544; https://doi.org/10.3390/medicina59091544 - 25 Aug 2023
Cited by 5 | Viewed by 3619
Abstract
Background and Objectives: Breast cancer (BC) is a leading cause of morbidity and mortality worldwide, and accurate assessment of axillary lymph nodes (ALNs) is crucial for patient management and outcomes. We aim to summarize the current state of ALN assessment techniques in [...] Read more.
Background and Objectives: Breast cancer (BC) is a leading cause of morbidity and mortality worldwide, and accurate assessment of axillary lymph nodes (ALNs) is crucial for patient management and outcomes. We aim to summarize the current state of ALN assessment techniques in BC and provide insights into future directions. Materials and Methods: This review discusses various imaging techniques used for ALN evaluation, including ultrasound, computed tomography, magnetic resonance imaging, and positron emission tomography. It highlights advancements in these techniques and their potential to improve diagnostic accuracy. The review also examines landmark clinical trials that have influenced axillary management, such as the Z0011 trial and the IBCSG 23-01 trial. The role of artificial intelligence (AI), specifically deep learning algorithms, in improving ALN assessment is examined. Results: The review outlines the key findings of these trials, which demonstrated the feasibility of avoiding axillary lymph node dissection (ALND) in certain patient populations with low sentinel lymph node (SLN) burden. It also discusses ongoing trials, including the SOUND trial, which investigates the use of axillary ultrasound to identify patients who can safely avoid sentinel lymph node biopsy (SLNB). Furthermore, the potential of emerging techniques and the integration of AI in enhancing ALN assessment accuracy are presented. Conclusions: The review concludes that advancements in ALN assessment techniques have the potential to improve patient outcomes by reducing surgical complications while maintaining accurate disease staging. However, challenges such as standardization of imaging protocols and interpretation criteria need to be addressed. Future research should focus on large-scale clinical trials to validate emerging techniques and establish their efficacy and cost-effectiveness. Over-all, this review provides valuable insights into the current status and future directions of ALN assessment in BC, highlighting opportunities for improving patient care. Full article
(This article belongs to the Special Issue Recent Advances in Breast Cancer Screening)
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17 pages, 1560 KiB  
Article
Quantitative Analysis of Residual COVID-19 Lung CT Features: Consistency among Two Commercial Software
by Vincenza Granata, Stefania Ianniello, Roberta Fusco, Fabrizio Urraro, Davide Pupo, Simona Magliocchetti, Fabrizio Albarello, Paolo Campioni, Massimo Cristofaro, Federica Di Stefano, Nicoletta Fusco, Ada Petrone, Vincenzo Schininà, Alberta Villanacci, Francesca Grassi, Roberta Grassi and Roberto Grassi
J. Pers. Med. 2021, 11(11), 1103; https://doi.org/10.3390/jpm11111103 - 28 Oct 2021
Cited by 14 | Viewed by 3082
Abstract
Objective: To investigate two commercial software and their efficacy in the assessment of chest CT sequelae in patients affected by COVID-19 pneumonia, comparing the consistency of tools. Materials and Methods: Included in the study group were 120 COVID-19 patients (56 women and 104 [...] Read more.
Objective: To investigate two commercial software and their efficacy in the assessment of chest CT sequelae in patients affected by COVID-19 pneumonia, comparing the consistency of tools. Materials and Methods: Included in the study group were 120 COVID-19 patients (56 women and 104 men; 61 years of median age; range: 21–93 years) who underwent chest CT examinations at discharge between 5 March 2020 and 15 March 2021 and again at a follow-up time (3 months; range 30–237 days). A qualitative assessment by expert radiologists in the infectious disease field (experience of at least 5 years) was performed, and a quantitative evaluation using thoracic VCAR software (GE Healthcare, Chicago, Illinois, United States) and a pneumonia module of ANKE ASG-340 CT workstation (HTS Med & Anke, Naples, Italy) was performed. The qualitative evaluation included the presence of ground glass opacities (GGOs) consolidation, interlobular septal thickening, fibrotic-like changes (reticular pattern and/or honeycombing), bronchiectasis, air bronchogram, bronchial wall thickening, pulmonary nodules surrounded by GGOs, pleural and pericardial effusion, lymphadenopathy, and emphysema. A quantitative evaluation included the measurements of GGOs, consolidations, emphysema, residual healthy parenchyma, and total lung volumes for the right and left lung. A chi-square test and non-parametric test were utilized to verify the differences between groups. Correlation coefficients were used to analyze the correlation and variability among quantitative measurements by different computer tools. A receiver operating characteristic (ROC) analysis was performed. Results: The correlation coefficients showed great variability among the quantitative measurements by different tools when calculated on baseline CT scans and considering all patients. Instead, a good correlation (≥0.6) was obtained for the quantitative GGO, as well as the consolidation volumes obtained by two tools when calculated on baseline CT scans, considering the control group. An excellent correlation (≥0.75) was obtained for the quantitative residual healthy lung parenchyma volume, GGO, consolidation volumes obtained by two tools when calculated on follow-up CT scans, and for residual healthy lung parenchyma and GGO quantification when the percentage change of these volumes were calculated between a baseline and follow-up scan. The highest value of accuracy to identify patients with RT-PCR positive compared to the control group was obtained by a GGO total volume quantification by thoracic VCAR (accuracy = 0.75). Conclusions: Computer aided quantification could be an easy and feasible way to assess chest CT sequelae due to COVID-19 pneumonia; however, a great variability among measurements provided by different tools should be considered. Full article
(This article belongs to the Special Issue Cancer Challenges during COVID-19 Pandemic)
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10 pages, 4849 KiB  
Case Report
A Rare Case of Cerebral Venous Thrombosis and Disseminated Intravascular Coagulation Temporally Associated to the COVID-19 Vaccine Administration
by Vincenzo D’Agostino, Ferdinando Caranci, Alberto Negro, Valeria Piscitelli, Bernardino Tuccillo, Fabrizio Fasano, Giovanni Sirabella, Ines Marano, Vincenza Granata, Roberta Grassi, Davide Pupo and Roberto Grassi
J. Pers. Med. 2021, 11(4), 285; https://doi.org/10.3390/jpm11040285 - 8 Apr 2021
Cited by 82 | Viewed by 14448
Abstract
Globally, at the time of writing (20 March 2021), 121.759.109 confirmed COVID-19 cases have been reported to the WHO, including 2.690.731 deaths. Globally, on 18 March 2021, a total of 364.184.603 vaccine doses have been administered. In Italy, 3.306.711 confirmed COVID-19 cases with [...] Read more.
Globally, at the time of writing (20 March 2021), 121.759.109 confirmed COVID-19 cases have been reported to the WHO, including 2.690.731 deaths. Globally, on 18 March 2021, a total of 364.184.603 vaccine doses have been administered. In Italy, 3.306.711 confirmed COVID-19 cases with 103.855 deaths have been reported to WHO. In Italy, on 9 March 2021, a total of 6.634.450 vaccine doses have been administered. On 15 March 2021, Italian Medicines Agency (AIFA) decided to temporarily suspend the use of the AstraZeneca COVID-19 vaccine throughout the country as a precaution, pending the rulings of the European Medicines Agency (EMA). This decision was taken in line with similar measures adopted by other European countries due to the death of vaccinated people. On 18 March 2021, EMA’s safety committee concluded its preliminary review about thromboembolic events in people vaccinated with COVID-19 Vaccine AstraZeneca at its extraordinary meeting, confirming the benefits of the vaccine continue to outweigh the risk of side effects, however, the vaccine may be associated with very rare cases of blood clots associated with thrombocytopenia, i.e., low levels of blood platelets with or without bleeding, including rare cases of cerebral venous thrombosis (CVT). We report the case of a 54-year-old woman who developed disseminated intravascular coagulation (DIC) with multi-district thrombosis 12 days after the AstraZeneca COVID-19 vaccine administration. A brain computed tomography (CT) scan showed multiple subacute intra-axial hemorrhages in atypical locations, including the right frontal and the temporal lobes. A plain old balloon angioplasty (POBA) of the right coronary artery was performed, without stent implantation, with restoration of distal flow, but with persistence of extensive thrombosis of the vessel. A successive thorax angio-CT added the findings of multiple contrast filling defects with multi-vessel involvement: at the level of the left upper lobe segmental branches, of left interlobar artery, of the right middle lobe segmental branches and of the right interlobar artery. A brain magnetic resonance imaging (MRI) in the same day showed the presence of an acute basilar thrombosis associated with the superior sagittal sinus thrombosis. An abdomen angio-CT showed filling defects at the level of left portal branch and at the level of right suprahepatic vein. Bilaterally, it was adrenal hemorrhage and blood in the pelvis. An evaluation of coagulation factors did not show genetic alterations so as the nasopharyngeal swab ruled out a COVID-19 infection. The patient died after 5 days of hospitalization in intensive care. Full article
(This article belongs to the Special Issue Cancer Challenges during COVID-19 Pandemic)
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