Prevalence of Mutations in the Pfdhfr, Pfdhps, and Pfmdr1 Genes of Malarial Parasites Isolated from Symptomatic Patients in Dogondoutchi, Niger
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sample Source and Study Design
2.2. DNA Isolation
2.3. SNP Detection of Pfdhfr, Pfdhps, and Pfmdr1 Genes
2.4. Sequencing of the Pfdhfr, Pfdhps, and Pfmdr1 Genes
2.5. Analysis of Genetic Variability of the Pfdhfr, Pfdhps, and Pfmdr1 Genes
3. Results
3.1. Characterization of the Pfdhfr, Pfdhps, and Pfmdr1 Genes
3.2. Analysis of Simple Mutations in the Pfdhfr, Pfdhps, and Pmdr1 Genes
3.2.1. Prevalence of Pfdhfr and Pfdhps Alleles
3.2.2. Prevalence of Pfmdr1 Gene Mutations
3.3. The Prevalence of Multiple Mutations in the Pfdhfr, Pfdhps, and Pfmdr1 Genes
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Gene | Mutation | Genotype | n/N | Frequency (%) |
---|---|---|---|---|
Pfdhfr | Single mutant | N51I (I) | 130/153 | 84.97 |
C59R (R) | 138/149 | 92.62 | ||
S108N (N) | 149/153 | 97.39 | ||
I164L | 0/153 | 0 | ||
Double mutant | N51I/C59R (IR) | 121/125 | 95.28 | |
N51I/S108N (IN) | 130/134 | 97 | ||
C59R/S108N (RN) | 121/125 | 97 | ||
Triple mutant | N51I/C59R/S108N (IRN) | 121/125 | 97 | |
Pfdhps | K540E | 0/33 | 0 | |
I431V | 0 | |||
S436A | 0 | |||
A437G | 0 | |||
A581G (G) | 1/33 | 3.03 | ||
A613Y (Y) | 3/34 | 8.82 | ||
Double mutant | A581G/A613Y (GY) | 1/33 | 3.03 | |
Pfmdr1 | Single mutant | N86Y (Y) | 15/147 | 10.20 |
Y184F (F) | 105/147 | 71.43 | ||
S1034C | 0/134 | 0 | ||
D1246Y | 0/134 | 0 | ||
Double mutant | N86Y/Y184F (YF) | 14/55 | 25.45 |
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Issa, I.; Lamine, M.M.; Hubert, V.; Ilagouma, A.; Adehossi, E.; Mahamadou, A.; Lobo, N.F.; Sarr, D.; Shollenberger, L.M.; Sandrine, H.; et al. Prevalence of Mutations in the Pfdhfr, Pfdhps, and Pfmdr1 Genes of Malarial Parasites Isolated from Symptomatic Patients in Dogondoutchi, Niger. Trop. Med. Infect. Dis. 2022, 7, 155. https://doi.org/10.3390/tropicalmed7080155
Issa I, Lamine MM, Hubert V, Ilagouma A, Adehossi E, Mahamadou A, Lobo NF, Sarr D, Shollenberger LM, Sandrine H, et al. Prevalence of Mutations in the Pfdhfr, Pfdhps, and Pfmdr1 Genes of Malarial Parasites Isolated from Symptomatic Patients in Dogondoutchi, Niger. Tropical Medicine and Infectious Disease. 2022; 7(8):155. https://doi.org/10.3390/tropicalmed7080155
Chicago/Turabian StyleIssa, Ibrahima, Mahaman Moustapha Lamine, Veronique Hubert, Amadou Ilagouma, Eric Adehossi, Aboubacar Mahamadou, Neil F. Lobo, Demba Sarr, Lisa M. Shollenberger, Houze Sandrine, and et al. 2022. "Prevalence of Mutations in the Pfdhfr, Pfdhps, and Pfmdr1 Genes of Malarial Parasites Isolated from Symptomatic Patients in Dogondoutchi, Niger" Tropical Medicine and Infectious Disease 7, no. 8: 155. https://doi.org/10.3390/tropicalmed7080155
APA StyleIssa, I., Lamine, M. M., Hubert, V., Ilagouma, A., Adehossi, E., Mahamadou, A., Lobo, N. F., Sarr, D., Shollenberger, L. M., Sandrine, H., Jambou, R., & Laminou, I. M. (2022). Prevalence of Mutations in the Pfdhfr, Pfdhps, and Pfmdr1 Genes of Malarial Parasites Isolated from Symptomatic Patients in Dogondoutchi, Niger. Tropical Medicine and Infectious Disease, 7(8), 155. https://doi.org/10.3390/tropicalmed7080155