1. Introduction
Regular physical activity is associated with reduced cancer incidence and progression, including renal cell carcinoma (RCC), the most common malignancy of the adult kidney. Epidemiological studies consistently report improved outcomes among physically active individuals [
1,
2,
3], and proposed mechanisms include modulation of cellular metabolism, oxidative stress responses, and oncogenic signaling pathways [
4]. However, the molecular basis by which exercise-related cues influence tumor biology remains incompletely defined, in part because experimental systems that model exercise-like physiological stress in cancer are limited [
5].
Pharmacological “exercise-mimetic” compounds have been used as tools to probe exercise-associated signaling in vitro [
6]. Resveratrol has been reported to elicit exercise-mimetic metabolic signaling, frequently involving AMP-activated protein kinase (AMPK)/sirtuin 1 (SIRT1), and to modulate EMT-related programs in diverse models; however, whether these pathways mediate the observed effects in Caki-1 3D spheroids remains to be determined [
7,
8,
9,
10,
11]. Resveratrol also exhibits anticancer activities in multiple preclinical models [
12,
13], yet how it relates to exercise-associated molecular features in RCC—particularly in tumor-mimetic 3D systems—remains underexplored.
A pathway of interest in RCC progression is the protein phosphatase 2A (PP2A) axis. The cancerous inhibitor of PP2A (CIP2A) is an oncoprotein that inhibits the tumor-suppressive phosphatase PP2A and has been linked to stabilization of c-Myc and pro-survival signaling [
14,
15,
16]. CIP2A overexpression has been reported in RCC and is associated with adverse clinical outcomes and therapeutic resistance [
17,
18]. CIP2A has also been implicated in epithelial–mesenchymal transition (EMT)-associated programs through signaling networks that include c-Myc and PI3K/AKT pathways [
17,
19], suggesting that CIP2A may connect oncogenic signaling with mesenchymal marker regulation in RCC.
Model selection is critical for evaluating such responses. Conventional 2D monolayer cultures do not capture key architectural and microenvironmental features of solid tumors, whereas 3D spheroid and organoid systems better reflect spatial organization and diffusion constraints relevant to tumor biology [
20,
21,
22]. These 3D platforms may therefore provide a more appropriate context to examine molecular responses to pharmacological stimuli intended to model exercise-related cues.
In this study, we used a human Caki-1 3D spheroid model to examine whether a 6-day repeated resveratrol exposure regimen is associated with changes in CIP2A abundance and EMT-associated marker expression in a tumor-mimetic 3D context. By focusing on the CIP2A/PP2A axis and EMT-related markers within a 3D RCC system, we aimed to provide proof-of-concept insight into resveratrol-responsive molecular features relevant to exercise-associated signaling hypotheses in renal carcinoma.
2. Materials and Methods
2.1. Materials
Resveratrol (purity ≥ 99%) was obtained from Sigma-Aldrich (St. Louis, MO, USA; catalog no. R5010) and dissolved in dimethyl sulfoxide (DMSO; Sigma-Aldrich) to prepare a 100 mM stock solution. Stock aliquots were stored at −20 °C and diluted in complete cell culture medium immediately before each experiment. The final DMSO concentration was consistently maintained below 0.1% in all experimental groups, including vehicle controls. Human RCC Caki-1 cells were purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA; HTB-46) and cultured in Dulbecco’s Modified Eagle Medium (DMEM; Gibco, Thermo Fisher Scientific, Waltham, MA, USA), supplemented with 10% fetal bovine serum (FBS; Gibco), 100 U/mL penicillin, and 100 μg/mL streptomycin. Cells were incubated at 37 °C in a 5% CO2 humidified atmosphere. For conventional 2D culture, cells were seeded in standard tissue culture-treated plates (SPL Life Sciences, Seoul, Republic of Korea). For 3D culture, cells were seeded at a density of 1 × 106 cells per well into ultra-low attachment six-well plates (Corning Inc., Corning, NY, USA; cat. no. 3471) and maintained for 6 d under non-adherent conditions to allow spontaneous spheroid formation. The following primary antibodies were used: anti-CIP2A (Santa Cruz Biotechnology, Dallas, TX, USA; sc-80659; RRID:AB_1121640), anti-fibronectin (Santa Cruz Biotechnology; sc-271098; RRID:AB_10608215), anti-α-smooth muscle actin (α-SMA; Abcam, Cambridge, UK; ab5694; RRID:AB_10608215), anti-E-cadherin (Abcam; ab76319; anti-rabbit), anti-N-cadherin (Abcam; ab76011; RRID: AB_1310479), and anti-β-actin (Santa Cruz Biotechnology; sc-47778; RRID:AB_626632). Alexa Fluor® 488–conjugated goat anti-mouse IgG (H + L) cross-adsorbed secondary antibody (Invitrogen™, Thermo Fisher Scientific, Waltham, MA, USA; Cat. No. A-11001; RRID:AB_2534069) and Alexa Fluor® 594–conjugated goat anti-rabbit IgG (H + L) cross-adsorbed secondary antibody (Invitrogen™, Thermo Fisher Scientific; Cat. No. A-11012; RRID:AB_2534079) were used for immunofluorescence staining. Hoechst 33342 nuclear stain (Thermo Fisher Scientific; Cat. No. H3570; RRID:AB_3675235) was used for nuclear counterstaining. Ethical approval was not required for this study as it utilized commercially available cell lines.
2.2. Cytotoxicity Assay and Dose Selection
To evaluate the concentration-dependent anticancer effects of resveratrol on human RCCs, Caki-1 cells were seeded into 96-well culture plates (SPL Life Sciences, Geumgang-ro, Korea) at a density of 3 × 103 cells per well in 100 μL of complete DMEM. After 24 h of incubation, resveratrol was administered at various concentrations. Resveratrol was first dissolved in DMSO to create a 100 mM stock solution and subsequently diluted in culture medium to yield a maximum working concentration of 1 mM. A two-fold serial dilution was performed to generate a range of treatment concentrations from 1 mM to 0.0156 mM. DMSO content was maintained below 0.1% in all treatment and control groups. Cell viability was monitored at 24, 48, 72, and 96 h post-treatment using the WST-1 colorimetric assay (Roche Applied Science, Mannheim, Germany), according to the manufacturer’s instructions. At each time point, 10 μL of WST-1 reagent was added directly to each well, followed by incubation for 2 h at 37 °C. Absorbance was measured at 450 nm using a microplate reader (BioTek Instruments, Winooski, VT, USA), with background correction at 650 nm. All experimental conditions were performed in triplicate and repeated independently three times. The percentage of viable cells was calculated by normalizing absorbance values to those of untreated controls. Based on the resulting dose–response profiles and estimated IC50 values at each time point, non-cytotoxic concentrations of resveratrol (10 and 50 μM) were selected for further mechanistic evaluation using the 3D spheroid model.
2.3. Six-Day Repeated Exposure Protocol Using Caki-1 3D Spheroids
To model prolonged exposure to resveratrol under tumor-mimicking 3D conditions, Caki-1 RCCs were seeded into ultra-low-attachment six-well plates (Corning Inc.) at a density of 3 × 10
5 cells per well. Cells were cultured in DMEM supplemented with 10% FBS, 1% penicillin–streptomycin, and 1% L-glutamine. To support extracellular matrix (ECM)-associated 3D organization during spheroid formation, Matrigel
® (Corning; [Cat. No. A4000046902]) was added at 1 mL per 3 wells at the time of seeding and gently mixed. Under non-adherent conditions, spheroids formed spontaneously over a 6 d period. Resveratrol treatment (10 or 50 μM) commenced on day 0, and the drug-containing medium was replaced on day 3 to maintain consistent exposure throughout the culture period. The vehicle control group received DMSO at a final concentration of <0.1%, following the same treatment schedule. At the end of the treatment period (day 6), spheroids were harvested for downstream analyses. Spheroid size at treatment initiation (day 0) and at harvest (day 6) was quantified from bright-field images by measuring the 2D projected area and calculating the area-equivalent diameter using ImageJ (version 1.53, NIH, Bethesda, MD, USA); objects intersecting the image boundary were excluded. Representative images and size quantification are provided in
Supplementary Figure S2. Immunofluorescence staining was conducted to visualize the expression patterns of CIP2A, fibronectin, and α-SMA, whereas Western blotting was performed to validate protein expression changes. This experimental approach was designed to recapitulate the metabolic and morphological adaptations observed under exercise-mimetic conditions, utilizing a 3D tumor model that mimics the in vivo architecture and cellular interactions of RCC. Through this system, we sought to determine whether resveratrol modulates oncogenic signaling and EMT-related processes within a physiologically relevant tumor-like microenvironment.
2.4. Immunofluorescence Staining for CIP2A and Epithelial–Mesenchymal Marker Analysis
To evaluate the spatial expression of CIP2A and key markers associated with EMT, Caki-1 spheroids were subjected to immunofluorescence staining and analyzed using a high-content imaging system (Operetta CLS; PerkinElmer, Waltham, MA, USA). After 6 d of resveratrol exposure, spheroids were collected and fixed with 4% paraformaldehyde for 20 min at room temperature. Following phosphate-buffered saline (PBS) washes, samples were permeabilized using 0.1% Triton X-100 for 10 min and subsequently blocked with 2% bovine serum albumin in PBS for 1 h to minimize non-specific antibody binding. Spheroids were incubated overnight at 4 °C with primary antibodies targeting CIP2A (1:100), fibronectin (1:100), and α-SMA (1:200). Subsequently, samples were washed and incubated with Alexa Fluor–conjugated secondary antibodies (1:1000 dilution) for 1 h at room temperature in the dark. Nuclear staining was performed with Hoechst 33342 (2 µg/mL) for 10 min. Stained spheroids were transferred to CellCarrier-384 ultra-clear plates (PerkinElmer) for imaging. Fluorescence images were acquired as confocal z-stacks under uniform exposure settings across all samples, enabling high-resolution visualization of marker distribution. Quantitative image analysis, including intensity measurement and localization mapping, was performed using Harmony High Content Analysis Software (version 4.9, PerkinElmer, Waltham, MA, USA). This approach provided robust and reproducible insight into how resveratrol influences CIP2A and EMT-related protein expression within the intact 3D architecture of renal carcinoma spheroids. Fluorescence intensity and marker distribution were quantified using ImageJ (NIH, Bethesda, MD, USA).
2.5. Western Blot Analysis
To investigate changes in CIP2A and EMT-associated protein levels following resveratrol exposure, Western blot analysis was conducted using protein lysates from Caki-1 spheroids cultured under 3D conditions. After 6 d of treatment, spheroids were carefully collected and lysed in RIPA buffer (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with protease and phosphatase inhibitor cocktails (Roche Diagnostics, Indianapolis, IN, USA). Lysis was performed on ice for 30 min to preserve protein integrity. Lysates were centrifuged at 14,000× g for 15 min at 4 °C, and the resulting supernatants were harvested. Protein concentrations were measured using the BCA Protein Assay Kit (Pierce Biotechnology, Rockford, IL, USA) according to the manufacturer’s instructions. Due to limited protein yield from 3D spheroids, samples from three independent culture runs were pooled per condition prior to lysis to obtain sufficient material for immunoblotting; accordingly, immunoblots were generated from pooled samples run once per target/membrane and are presented as confirmatory results. Equal amounts of total protein (20–30 µg per lane) were mixed with Laemmli sample buffer, boiled at 95 °C for 5 min, and resolved by SDS–polyacrylamide gel electrophoresis. Proteins were transferred to PVDF membranes (Millipore, Billerica, MA, USA) using a conventional wet transfer system. Membranes were blocked for 1 h in 5% non-fat dry milk prepared in Tris-buffered saline with 0.1% Tween-20 to prevent non-specific antibody binding. Primary antibodies against CIP2A (1:500), fibronectin (1:500), α-SMA (1:1000), and β-actin (1:1000, used as a loading control) were applied and incubated overnight at 4 °C. After washing, membranes were incubated for 1 h at room temperature with horseradish peroxidase-conjugated secondary antibodies (1:2000 dilution). Immunoreactive bands were visualized using enhanced chemiluminescence reagents (Thermo Scientific, Waltham, MA, USA) and detected using a ChemiDoc™ MP imaging system (Bio-Rad Laboratories, Hercules, CA, USA). Band intensities were quantified using Image Lab software (Version 6.1; Bio-Rad Laboratories, Inc., Hercules, CA, USA), and relative levels were normalized to β-actin. This method allowed for accurate quantification of resveratrol-induced protein expression alterations in a 3D renal cancer model.
2.6. Statistical Analysis
Statistical analyses were performed using GraphPad Prism version 9.5.1 (GraphPad Software, San Diego, CA, USA). Quantitative data are presented as mean ± standard deviation (SD), unless otherwise stated. For immunofluorescence quantification, individual spheroids were treated as the biological unit (n = number of spheroids analyzed per condition; n = 5 spheroids per condition). When multiple images (fields) were acquired from a single spheroid, values were averaged to yield one value per spheroid for statistical analysis. Differences among groups were evaluated using one-way analysis of variance (ANOVA) followed by Dunnett’s multiple comparisons test for comparisons versus the vehicle control group. A p-value < 0.05 was considered statistically significant. Because Western blot samples were generated from pooled spheroid lysates due to limited protein yield, independent replicate blots (biological n) could not be defined; therefore, Western blots are presented as confirmatory results and were not used for statistical inference based on densitometry.
4. Discussion
Physical activity is associated with a reduced risk of cancer incidence and progression, including RCC [
23]. Epidemiological data suggest that regular exercise contributes to improved metabolic homeostasis, reduced systemic inflammation, and modulation of signaling pathways involved in tumor development and progression [
24,
25]. However, despite these well-established correlations, direct experimental evidence elucidating how exercise-like stimuli affect human cancer cells at the molecular level—particularly within tumor-mimetic 3D environments—remains limited.
In this study, we addressed this gap by employing a 3D culture model of human renal carcinoma (Caki-1) spheroids and using resveratrol as a pharmacological stimulus that has been reported to engage exercise-related metabolic regulators such as SIRT1 and AMPK [
26,
27]. These pathways have been implicated in exercise-associated benefits, including regulation of energy balance, mitochondrial homeostasis, and cellular stress responses [
28]. Accordingly, resveratrol has been discussed in the literature as a candidate exercise-mimetic compound [
29,
30,
31]. However, because we did not directly assess AMPK/SIRT1 activation or other metabolic stress markers in our model, we use the term “exercise-mimetic” in a conservative, literature-contextual sense and interpret our findings primarily at the level of observed phenotypic and molecular responses in 2D and 3D cultures. Our results demonstrate that resveratrol induces a dose-dependent reduction in Caki-1 cell viability under 2D culture conditions and promotes cytoplasmic vacuole formation, which we interpret as a stress-associated morphological change. The underlying pathways were not assessed in this study, and interpretation will require targeted validation using autophagy/apoptosis and stress signaling markers (e.g., LC3, p62, cleaved caspase-3, PARP, and AMPK/mTOR-related readouts) in future work. Because viability was assessed only in Caki-1 cells, the observed reduction should not be interpreted as tumor-selective cytotoxicity, and comparison with non-cancer renal epithelial cells (e.g., HK-2 or primary renal epithelial cells) will be required in future work to establish selectivity. Although these observations provide initial evidence of the cytostatic activity of resveratrol, the most compelling findings were obtained using the 3D spheroid model, which more closely recapitulates the spatial organization, diffusion gradients, and cell–cell interactions of in vivo tumors.
In this 3D context, resveratrol reduced the protein abundance of CIP2A (cancerous inhibitor of PP2A), an oncoprotein reported to inhibit the tumor suppressor phosphatase PP2A and stabilize c-Myc [
32]. Given that CIP2A has been linked to oncogenic processes and poor prognosis in several cancers, including RCC [
18], the observed reduction in CIP2A may be biologically relevant. However, PP2A enzymatic activity and downstream signaling readouts (e.g., c-Myc abundance and AKT/ERK phosphorylation) were not measured in this study; therefore, we cannot determine whether CIP2A reduction was accompanied by PP2A reactivation or pathway-level modulation. Notably, CIP2A reduction co-occurred with decreased expression of mesenchymal markers, including fibronectin and α-SMA, as assessed by immunofluorescence and Western blot analyses. EMT is a dynamic process through which epithelial tumor cells acquire mesenchymal features and is associated with metastasis, drug resistance, and immune evasion [
33]. While these marker-level changes are consistent with attenuation of an EMT-associated molecular phenotype under resveratrol treatment in this 3D model, functional assays relevant to EMT were not performed (e.g., migration, invasion, wound-healing, or spheroid dispersal/outgrowth). Therefore, we do not infer changes in motility or invasive behavior from the current dataset, and a causal relationship between CIP2A downregulation and EMT-marker changes cannot be concluded. Taken together, our findings support a working hypothesis that resveratrol may influence EMT-associated signaling through a CIP2A–PP2A-related mechanism. This proposed CIP2A–PP2A–EMT axis warrants future validation by directly measuring PP2A activity and downstream signaling intermediates (including c-Myc and AKT/ERK phosphorylation) and by applying CIP2A loss-of-function and rescue experiments [
34].
A strength of this study is the use of a 3D renal carcinoma organoid model, which enabled the observation of phenotypic and molecular responses in a context that more closely mirrors in vivo tumor physiology. Compared with traditional 2D cultures, 3D spheroids provide a more accurate platform to study drug responses, cellular heterogeneity, and microenvironmental interactions. By applying resveratrol in this setting, we show that resveratrol treatment is associated with reduced CIP2A abundance and attenuation of mesenchymal marker expression in a human 3D Caki-1 RCC spheroid model.
Our findings have several implications. First, our findings support resveratrol as a candidate compound for further evaluation in RCC models. However, the nominal concentrations used here (10–50 µM) may exceed systemically achievable levels in vivo because resveratrol has limited bioavailability and undergoes rapid metabolism. Future studies should incorporate exposure-aligned designs (e.g., lower concentrations, repeated low-dose regimens, and/or bioavailability-enhancing formulations) to strengthen translational interpretation. Translational considerations. The translational interpretation of resveratrol in RCC is constrained by poor oral bioavailability and rapid metabolism, which can limit sustained systemic exposure. Accordingly, our findings should be interpreted as proof-of-concept observations in an in vitro 3D spheroid system rather than evidence of clinically achievable exposure or therapeutic efficacy. Future work should consider exposure-aligned dosing strategies and bioavailability-enhancing delivery approaches, together with validation in additional RCC models, including patient-derived systems. Second, they highlight the utility of candidate exercise-mimetic compounds as experimental tools for dissecting exercise-related tumor biology in human organoid systems. Finally, they underscore the feasibility of using cancer organoids to model complex physiological stresses—such as those induced by physical activity—within a controlled laboratory setting. Notably, matched molecular profiling of CIP2A and EMT-associated markers in 2D cultures was not performed in this study and will be addressed in future work to enable direct 2D–3D comparisons. Future studies could leverage transcriptomic and phosphoproteomic profiling to identify downstream pathways altered by CIP2A inhibition, alongside functional assays to assess changes in migration, invasion, and resistance phenotypes. Determining whether the EMT-associated marker changes observed here extend to other RCC subtypes or are limited to Caki-1 cells would provide insights into its broader applicability. Moreover, comparing the effects of resveratrol with exercise-conditioned serum or mechanical stress models could validate its role as a surrogate for physical activity in cancer modulation.
Despite these implications, several limitations should be considered when interpreting the present findings. A key limitation of this study is that the experiments were performed using a single human RCC cell line (Caki-1) in 2D culture and 3D spheroid formats. RCC is molecularly and clinically heterogeneous, and responses to resveratrol may differ across subtypes (e.g., clear cell, papillary, and chromophobe RCC) and across patient-derived tumors. In addition, metabolic stress pathway activation was not directly evaluated (e.g., AMPK phosphorylation/activation, SIRT1 activity, mitochondrial function, ROS, or ATP), which limits mechanistic interpretation of resveratrol as an exercise-mimetic stimulus in this model. Relatedly, because AMPK/SIRT1 activation and downstream CIP2A–PP2A signaling events (e.g., PP2A activity, c-Myc stability, and AKT/ERK phosphorylation) were not measured, mechanistic causality linking metabolic stress to CIP2A suppression and EMT modulation cannot be concluded. Furthermore, functional endpoints relevant to EMT were not assessed (e.g., migration, invasion, wound-healing, or spheroid dispersal/outgrowth assays), limiting interpretation of the marker changes in terms of motility or invasive behavior. We also did not evaluate molecular markers required to interpret vacuole formation and stress responses (e.g., LC3/p62 for autophagy, cleaved caspase-3/PARP for apoptosis, and AMPK/mTOR pathway readouts), which limits conclusions regarding the underlying stress mechanism. Therefore, the present findings should be interpreted as proof-of-concept observations within a Caki-1 spheroid context. Future work will validate reproducibility across multiple RCC cell lines representing distinct subtypes and, where feasible, in patient-derived organoids to assess subtype robustness and translational relevance. In parallel, we will test the proposed signaling framework by quantifying p-AMPK/p-ACC and SIRT1 activity, and by assessing PP2A activity together with canonical downstream substrates following resveratrol exposure.
Our study provides evidence that resveratrol treatment is associated with reduced CIP2A abundance and attenuation of mesenchymal marker expression in a human 3D Caki-1 RCC spheroid model; however, pathway-level validation and cross-model replication will be required to establish mechanistic and subtype generalizability. This 3D platform may be useful for exploring how exercise-related molecular cues and their pharmacological mimetics modulate tumor-associated phenotypes in vitro, and it provides a foundation for future studies evaluating translational relevance across diverse RCC models, including additional cell lines and patient-derived organoids.