Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region
Abstract
:1. Introduction
2. Materials and Methods
3. Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Patients N = 180 | |
---|---|
Median age | 57 (19–92) |
Gender | |
Female | 80 (44.4) |
Male | 100 (55.6) |
Cancer stage at diagnosis | |
I | 18 (10) |
II | 16 (8.9) |
III | 30 (16.7) |
IV | 105 (58.3) |
Not reported | 11 (6.1) |
Cancer status prior to molecular profiling | |
Stable disease | 37 (20.6) |
Partial response | 39 (21.7) |
Progressive disease | 104 (57.8) |
Molecular profiling in disease course | |
Early | 38 (21.1) |
Late * | 142 (78.9) |
Malignancy | FoundationOne CDx | FoundationOne Heme | FoundationOne Liquid | FoundationOne Liquid CDx | Guardant 360 |
---|---|---|---|---|---|
Sarcomas | 3 | 31 | 1 | 0 | 1 |
Brain | 9 | 0 | 0 | 0 | 0 |
Breast | 17 | 0 | 1 | 0 | 1 |
Gastrointestinal | 34 | 0 | 1 | 4 | 3 |
Melanoma | 5 | 0 | 0 | 1 | 0 |
NSCLC | 29 | 1 | 1 | 5 | 2 |
Others | 25 | 0 | 0 | 5 | 0 |
Breast | NSCLC | GI | Brain | Sarcomas | Others | |
---|---|---|---|---|---|---|
Genes detected by NGS | n = 19 | n = 38 | n = 42 | n = 9 | n = 36 | n = 30 |
Most commonly detected genes | TP53 | TP53 | KRAS | TERT | TP53 | TP53 |
PIK3CA | NF1/2 | APC | TP53 | CDK4 | CDKN2A/B | |
ZNF | KRAS | TP53 | PTEN | MDM2 | CCNE1 | |
AKT | KEAP1 | NRAS | CDKN2A/B | FRS2 | KRAS | |
NSD3 | STK11 | PIK3CA | NF1 | ATRX | FGF | |
MDM2 | ERBB2 | FGF | ATRX | CDKN2A/B | TERT | |
RAD21 | CDKN2A/B | CDKN2A/B | EGFR | RB1 | MYC | |
GATA3 | MET | FGF | MTAP | TET2 | BRAF | |
MYC | EGFR | SMAD4 | IDH1 | EWSR1 | PIK3R1 |
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Mahfouz, R.; Abou Zeidane, R.; Diab, T.; Tarhini, A.; Sbaity, E.; Kazarian, H.; El Zibaoui, Y.; Naji, N.S.; Barake, M.; Assi, H.I. Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region. Diagnostics 2025, 15, 1183. https://doi.org/10.3390/diagnostics15101183
Mahfouz R, Abou Zeidane R, Diab T, Tarhini A, Sbaity E, Kazarian H, El Zibaoui Y, Naji NS, Barake M, Assi HI. Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region. Diagnostics. 2025; 15(10):1183. https://doi.org/10.3390/diagnostics15101183
Chicago/Turabian StyleMahfouz, Rami, Reine Abou Zeidane, Tasnim Diab, Ali Tarhini, Eman Sbaity, Houry Kazarian, Yomna El Zibaoui, Nour Sabiha Naji, Mounir Barake, and Hazem I. Assi. 2025. "Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region" Diagnostics 15, no. 10: 1183. https://doi.org/10.3390/diagnostics15101183
APA StyleMahfouz, R., Abou Zeidane, R., Diab, T., Tarhini, A., Sbaity, E., Kazarian, H., El Zibaoui, Y., Naji, N. S., Barake, M., & Assi, H. I. (2025). Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region. Diagnostics, 15(10), 1183. https://doi.org/10.3390/diagnostics15101183