Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region
Abstract
1. Introduction
2. Materials and Methods
3. Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Patients N = 180 | |
---|---|
Median age | 57 (19–92) |
Gender | |
Female | 80 (44.4) |
Male | 100 (55.6) |
Cancer stage at diagnosis | |
I | 18 (10) |
II | 16 (8.9) |
III | 30 (16.7) |
IV | 105 (58.3) |
Not reported | 11 (6.1) |
Cancer status prior to molecular profiling | |
Stable disease | 37 (20.6) |
Partial response | 39 (21.7) |
Progressive disease | 104 (57.8) |
Molecular profiling in disease course | |
Early | 38 (21.1) |
Late * | 142 (78.9) |
Malignancy | FoundationOne CDx | FoundationOne Heme | FoundationOne Liquid | FoundationOne Liquid CDx | Guardant 360 |
---|---|---|---|---|---|
Sarcomas | 3 | 31 | 1 | 0 | 1 |
Brain | 9 | 0 | 0 | 0 | 0 |
Breast | 17 | 0 | 1 | 0 | 1 |
Gastrointestinal | 34 | 0 | 1 | 4 | 3 |
Melanoma | 5 | 0 | 0 | 1 | 0 |
NSCLC | 29 | 1 | 1 | 5 | 2 |
Others | 25 | 0 | 0 | 5 | 0 |
Breast | NSCLC | GI | Brain | Sarcomas | Others | |
---|---|---|---|---|---|---|
Genes detected by NGS | n = 19 | n = 38 | n = 42 | n = 9 | n = 36 | n = 30 |
Most commonly detected genes | TP53 | TP53 | KRAS | TERT | TP53 | TP53 |
PIK3CA | NF1/2 | APC | TP53 | CDK4 | CDKN2A/B | |
ZNF | KRAS | TP53 | PTEN | MDM2 | CCNE1 | |
AKT | KEAP1 | NRAS | CDKN2A/B | FRS2 | KRAS | |
NSD3 | STK11 | PIK3CA | NF1 | ATRX | FGF | |
MDM2 | ERBB2 | FGF | ATRX | CDKN2A/B | TERT | |
RAD21 | CDKN2A/B | CDKN2A/B | EGFR | RB1 | MYC | |
GATA3 | MET | FGF | MTAP | TET2 | BRAF | |
MYC | EGFR | SMAD4 | IDH1 | EWSR1 | PIK3R1 |
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Mahfouz, R.; Abou Zeidane, R.; Diab, T.; Tarhini, A.; Sbaity, E.; Kazarian, H.; El Zibaoui, Y.; Naji, N.S.; Barake, M.; Assi, H.I. Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region. Diagnostics 2025, 15, 1183. https://doi.org/10.3390/diagnostics15101183
Mahfouz R, Abou Zeidane R, Diab T, Tarhini A, Sbaity E, Kazarian H, El Zibaoui Y, Naji NS, Barake M, Assi HI. Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region. Diagnostics. 2025; 15(10):1183. https://doi.org/10.3390/diagnostics15101183
Chicago/Turabian StyleMahfouz, Rami, Reine Abou Zeidane, Tasnim Diab, Ali Tarhini, Eman Sbaity, Houry Kazarian, Yomna El Zibaoui, Nour Sabiha Naji, Mounir Barake, and Hazem I. Assi. 2025. "Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region" Diagnostics 15, no. 10: 1183. https://doi.org/10.3390/diagnostics15101183
APA StyleMahfouz, R., Abou Zeidane, R., Diab, T., Tarhini, A., Sbaity, E., Kazarian, H., El Zibaoui, Y., Naji, N. S., Barake, M., & Assi, H. I. (2025). Real-World Data: Implementation and Outcomes of Next-Generation Sequencing in the MENA Region. Diagnostics, 15(10), 1183. https://doi.org/10.3390/diagnostics15101183