Proliferative Diabetic Retinopathy Diagnosis Using Varying-Scales Filter Banks and Double-Layered Thresholding
Abstract
:1. Introduction
- Neovascularization on disc (NVD): If the new vessel formation occurs within one disc diameter of the optical disc then this is categorized as NVD or neovascularization on disc
- Neovascularization elsewhere (NVE): If new vessel formation occurs elsewhere on the surface of the retina, then this is called neovascularization elsewhere (NVE).
2. Related Work
2.1. Machine-Learning-Based Algorithms
2.2. Deep-Learning-Based Algorithms
3. Materials and Methods
3.1. Preprocessing
3.2. Vessel Segmentation
3.3. Abnormal Vessel Detection
3.4. Optic Disc Detection
3.5. Feature Selection and Thresholding
- Entropy: Entropy is the measure of uncertainty in a system. Abnormal blood vessels are fragile and follow no proper pattern. Thus, the regions that contain abnormal blood vessels have a high entropy value. If is the probability of occurrence of a grey level k and M is the number of grey levels in the image, then entropy is calculated as:
- Energy: Energy is the sum of squares of all pixel intensities within a candidate region of interest. The energy of the region containing the abnormal blood vessels lies in between those of the regions that contain normal blood vessels and the bright lesions or exudates. If is the pixel value in an image then the energy is calculated as:
- Homogeneity: Homogeneity returns a value that tells the closeness of the distribution of elements. The homogeneity of abnormal blood vessels lies very close to that of normal blood vessels but it is away from that of the lesions and exudates. The abnormal blood vessels originate near normal vessels, while the exudates and bright lesions can be found anywhere on the retina. The homogeneity is calculated as:
- Energy: As a smaller window size was chosen for NVE, it shows a relatively high energy value in that small area.
- Gradient: The mean gradient magnitude in the candidate region of interest is calculated by using the Sobel gradient operator. Separate measurements of the gradient component in each orientation, called and , are calculated. Then the magnitude of the gradient is given by:The mean of the gradient magnitude is used as a feature, which is:
- Gradient Direction: The directional gradient is the standard deviation of the Sobel gradient in the candidate region of interest. As the abnormal vessels are much less defined, are less homogeneous, and have more contrast variation than normal vessels, this feature is taken in to account. The direction can be calculated as:
3.6. Post-Processing
- Mean Intensity : It is the mean value of pixels within the green plane of the candidate region.
- Maximum Intensity : It is the maximum value of pixels within the green channel of the candidate region.
- Mean Skewness : It is the measure of the lack of symmetry in a candidate region. It is computed as:
- Entropy : It is the value of all pixels in a candidate region and its neighboring pixels. It is the measure of unpredictability in an ROI.
- Energy : It is the sum of the squares of all the pixel values of the green plane inside a candidate region.
- Mean Gradient : It is the mean of the pixels of the edges detected using the Sobel gradient within the candidate region.
- Gradient Direction : It is the standard deviation of the direction of the Sobel gradient in a candidate region.
- Mean Intensity of red plane : It is the mean value of pixels within the red plane of the candidate region.
- Mean Intensity of blue plane : It is the mean value of pixels within the blue plane of the candidate region.
- Mean Intensity lightness in LAB color space : It is the mean value of pixels within the lightness plane in the LAB color space of the candidate region.
3.7. Grading of PDR as NVD or NVE
4. Results
- are true positives, meaning abnormal blood vessel regions correctly classified as abnormal.
- are true negatives, meaning normal blood vessel regions correctly classified an normal.
- are false positives, meaning normal blood vessel regions wrongly classified as abnormal.
- are false negatives, meaning abnormal blood vessel regions wrongly classified as normal blood vessel regions.
5. Conclusions
Author Contributions
Funding
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
PDR | Proliferative Diabetic Retinopathy |
DR | Diabetic Retinopathy |
NVD | Neovascularization on Disc |
NVE | Neovascularization Elsewhere |
SVM | Support Vector Machine |
OD | Optic Disc |
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Parameters | Value for Normal | Value for Abnormal |
---|---|---|
Blood Vessels | Blood Vessels | |
Dilation (a) | 11 | 1.8 |
Elongation () | 5 | 1 |
Rotation Angle () | 10° | 10° |
[0,2.5] | [0,2] |
Parameters | Value for Normal | Value for Abnormal |
---|---|---|
Blood Vessels | Blood Vessels | |
Dilation(a) | 7 | 2 |
Elongation () | 10 | 1 |
Rotation angle () | 10° | 10° |
[0,2.5] | [0,2.5] |
Grade | Condition | Class |
---|---|---|
0 | No abnormal blood vessels present | Healthy |
1 | A few abnormal blood vessels present 1dd away from the OD | NVE |
2 | Abnormal blood vessels present within 1dd of OD | NVD |
Database | Images | Normal | PDR | NVD | NVE |
---|---|---|---|---|---|
MESSIDOR | 1200 | 397 | 37 | 27 | 18 |
AFIO | 20 | 13 | 7 | 4 | 3 |
Sr. | Method | Number of Images | Sen | Spec | Acc/F1 Score |
---|---|---|---|---|---|
1 | Jelinek et al. [13] | 27 images | – | – | 0.90 |
2 | Saranya et al. [15] | 50 images from MESSIDOR and DRIVE | 0.96 | 0.89 | 0.96 |
3 | Lee et al. [17] | 137 images from MESSIDOR | 0.96 | 0.99 | 0.98 |
4 | Welikala et al. [18] | 60 images | 0.91 | 0.92 | 0.96 |
5 | Garima et al. [15] | 799 images | 0.95 | 0.83 | 0.96 |
8 | Proposed | 1200 images from MESIDOR | 0.90 | 1 | 0.98 |
– | 20 images from AFIO | 0.80 | 1 | 0.95 |
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Huda, N.u.; Salam, A.A.; Alghamdi, N.S.; Zeb, J.; Akram, M.U. Proliferative Diabetic Retinopathy Diagnosis Using Varying-Scales Filter Banks and Double-Layered Thresholding. Diagnostics 2023, 13, 2231. https://doi.org/10.3390/diagnostics13132231
Huda Nu, Salam AA, Alghamdi NS, Zeb J, Akram MU. Proliferative Diabetic Retinopathy Diagnosis Using Varying-Scales Filter Banks and Double-Layered Thresholding. Diagnostics. 2023; 13(13):2231. https://doi.org/10.3390/diagnostics13132231
Chicago/Turabian StyleHuda, Noor ul, Anum Abdul Salam, Norah Saleh Alghamdi, Jahan Zeb, and Muhammad Usman Akram. 2023. "Proliferative Diabetic Retinopathy Diagnosis Using Varying-Scales Filter Banks and Double-Layered Thresholding" Diagnostics 13, no. 13: 2231. https://doi.org/10.3390/diagnostics13132231
APA StyleHuda, N. u., Salam, A. A., Alghamdi, N. S., Zeb, J., & Akram, M. U. (2023). Proliferative Diabetic Retinopathy Diagnosis Using Varying-Scales Filter Banks and Double-Layered Thresholding. Diagnostics, 13(13), 2231. https://doi.org/10.3390/diagnostics13132231