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Article

Automated Classification of Atherosclerotic Radiomics Features in Coronary Computed Tomography Angiography (CCTA)

by
Mardhiyati Mohd Yunus
1,2,
Ahmad Khairuddin Mohamed Yusof
3,
Muhd Zaidi Ab Rahman
3,
Xue Jing Koh
1,
Akmal Sabarudin
1,
Puteri N. E. Nohuddin
4,5,
Kwan Hoong Ng
6,7,
Mohd Mustafa Awang Kechik
8 and
Muhammad Khalis Abdul Karim
8,*
1
Programme of Diagnostic Imaging and Radiotherapy, Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur 56000, Malaysia
2
Programme of Medical Imaging, Faculty of Health Sciences, Universiti Selangor (UNISEL), Shah Alam 40000, Malaysia
3
Imaging Centre, Institut Jantung Negara (IJN), Kuala Lumpur 50400, Malaysia
4
Institute of IR4.0, Universiti Kebangsaan Malaysia (UKM), Bangi 43600, Malaysia
5
Faculty of Business, Higher College of Technology, Sharjah, United Arab Emirates
6
Department of Biomedical Imaging, Faculty of Medicine, Universiti Malaya, Kuala Lumpur 50603, Malaysia
7
Faculty of Medicine and Health Sciences, UCSI University, Persiaran Springhill, Port Dickson 71010, Malaysia
8
Department of Physics, Faculty of Science, Universiti Putra Malaysia (UPM), Seri Kembangan 43400, Malaysia
*
Author to whom correspondence should be addressed.
Diagnostics 2022, 12(7), 1660; https://doi.org/10.3390/diagnostics12071660
Submission received: 10 June 2022 / Revised: 23 June 2022 / Accepted: 1 July 2022 / Published: 8 July 2022
(This article belongs to the Section Medical Imaging and Theranostics)

Abstract

Radiomics is the process of extracting useful quantitative features of high-dimensional data that allows for automated disease classification, including atherosclerotic disease. Hence, this study aimed to quantify and extract the radiomic features from Coronary Computed Tomography Angiography (CCTA) images and to evaluate the performance of automated machine learning (AutoML) model in classifying the atherosclerotic plaques. In total, 202 patients who underwent CCTA examination at Institut Jantung Negara (IJN) between September 2020 and May 2021 were selected as they met the inclusion criteria. Three primary coronary arteries were segmented on axial sectional images, yielding a total of 606 volume of interest (VOI). Subsequently, the first order, second order, and shape order of radiomic characteristics were extracted for each VOI. Model 1, Model 2, Model 3, and Model 4 were constructed using AutoML-based Tree-Pipeline Optimization Tools (TPOT). The heatmap confusion matrix, recall (sensitivity), precision (PPV), F1 score, accuracy, receiver operating characteristic (ROC), and area under the curve (AUC) were analysed. Notably, Model 1 with the first-order features showed superior performance in classifying the normal coronary arteries (F1 score: 0.88; Inverse F1 score: 0.94), as well as in classifying the calcified (F1 score: 0.78; Inverse F1 score: 0.91) and mixed plaques (F1 score: 0.76; Inverse F1 score: 0.86). Moreover, Model 2 consisting of second-order features was proved useful, specifically in classifying the non-calcified plaques (F1 score: 0.63; Inverse F1 score: 0.92) which are a key point for prediction of cardiac events. Nevertheless, Model 3 comprising the shape-based features did not contribute to the classification of atherosclerotic plaques. Overall, TPOT shown promising capabilities in terms of finding the best pipeline and tailoring the model using CCTA-based radiomic datasets.
Keywords: atherosclerotic plaques; CCTA; radiomic features; AutoML; TPOT; supervised atherosclerotic plaques; CCTA; radiomic features; AutoML; TPOT; supervised

Share and Cite

MDPI and ACS Style

Yunus, M.M.; Mohamed Yusof, A.K.; Ab Rahman, M.Z.; Koh, X.J.; Sabarudin, A.; Nohuddin, P.N.E.; Ng, K.H.; Kechik, M.M.A.; Karim, M.K.A. Automated Classification of Atherosclerotic Radiomics Features in Coronary Computed Tomography Angiography (CCTA). Diagnostics 2022, 12, 1660. https://doi.org/10.3390/diagnostics12071660

AMA Style

Yunus MM, Mohamed Yusof AK, Ab Rahman MZ, Koh XJ, Sabarudin A, Nohuddin PNE, Ng KH, Kechik MMA, Karim MKA. Automated Classification of Atherosclerotic Radiomics Features in Coronary Computed Tomography Angiography (CCTA). Diagnostics. 2022; 12(7):1660. https://doi.org/10.3390/diagnostics12071660

Chicago/Turabian Style

Yunus, Mardhiyati Mohd, Ahmad Khairuddin Mohamed Yusof, Muhd Zaidi Ab Rahman, Xue Jing Koh, Akmal Sabarudin, Puteri N. E. Nohuddin, Kwan Hoong Ng, Mohd Mustafa Awang Kechik, and Muhammad Khalis Abdul Karim. 2022. "Automated Classification of Atherosclerotic Radiomics Features in Coronary Computed Tomography Angiography (CCTA)" Diagnostics 12, no. 7: 1660. https://doi.org/10.3390/diagnostics12071660

APA Style

Yunus, M. M., Mohamed Yusof, A. K., Ab Rahman, M. Z., Koh, X. J., Sabarudin, A., Nohuddin, P. N. E., Ng, K. H., Kechik, M. M. A., & Karim, M. K. A. (2022). Automated Classification of Atherosclerotic Radiomics Features in Coronary Computed Tomography Angiography (CCTA). Diagnostics, 12(7), 1660. https://doi.org/10.3390/diagnostics12071660

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