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Genes
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4 November 2020

Genetic Biomarkers of Panic Disorder: A Systematic Review

,
,
,
and
1
Faculty of Biology, Lomonosov Moscow State University, 119991 Moscow, Russia
2
Center of Genetics and Life Sciences, Sirius University of Science and Technology, 354340 Sochi, Russia
*
Author to whom correspondence should be addressed.
This article belongs to the Special Issue Genes and Biomarkers of Mood and Anxiety Disorders

Abstract

(1) Background: Although panic disorder (PD) is one of the most common anxiety disorders severely impacting quality of life, no effective genetic testing exists; known data on possible genetic biomarkers is often scattered and unsystematic which complicates further studies. (2) Methods: We used PathwayStudio 12.3 (Elsevier, The Netherlands) to acquire literature data for further manual review and analysis. 229 articles were extracted, 55 articles reporting associations, and 32 articles reporting no associations were finally selected. (3) Results: We provide exhaustive information on genetic biomarkers associated with PD known in the scientific literature. Data is presented in two tables. Genes COMT and SLC6A4 may be considered the most promising for PD diagnostic to date. (4) Conclusions: This review illustrates current progress in association studies of PD and may indicate possible molecular mechanisms of its pathogenesis. This is a possible basis for data analysis, novel experimental studies, or developing test systems and personalized treatment approaches.

1. Introduction

Anxiety disorders are a very wide group of mental disorders which includes, according to ICD-11 (World Health Organization, 2018), a variety of conditions with panic disorder (PD) being one of the most common and often chronic [1,2]. It is predominantly characterized by panic attacks and anticipatory anxiety. Many researchers report that PD can noticeably reduce the quality of a patient’s life [3]. Moreover, Sherbourne et al. (1996) report that PD may alter a patient’s quality of life is even more dramatically than other severe chronic diseases including diabetes, cardiovascular and lung diseases [4].
The prevalence of PD is estimated at 1–3%, with females suffering from it twice as frequently as males [5]. Family and twin studies estimated PD heritability at 0.48 [6], with a relative risk of PD in proband’s first-degree relatives being 6–17 times higher than average risk across the whole population [7,8].
Concordance in monozygotic twins is approximately 20.7–73.0% [6]. Both genetic and environmental factors are considered to be involved in the development of PD. It has been shown that being in stressful conditions can provoke panic attacks in people predisposed to anxiety [9].
Molecular genetic markers, along with psychological examination and evaluation of environmental factors causing stress, are promising in regard to creating effective PD-predisposition tests. This is especially important for people who are frequently exposed to stressful conditions due to their profession and/or lifestyle. Development of such predisposition tests may help to take PD-risks into account and preventing the disease thus increasing the quality of life and professional effectiveness in both the general population and trained professionals.
In this work, we aimed to conduct a search and analysis of currently available literature data on PD-associated genetic markers.

2. Materials and Methods

We used Pathway Studio 12.3 software (https://mammalcedfx.pathwaystudio.com/, Elsevier, The Netherlands) for automated steps of our analysis. Pathway Studio uses the built-in ResNet database (https://mammalcedfx.pathwaystudio.com/, Elsevier) which is a curated database containing extracted from scientific literature via data-mining information regarding biological objects and their interactions. The database is updated every two weeks, the latest update included in the current study took place on 1st September 2020. According to Elsevier (https://www.elsevier.com/__data/assets/pdf_file/0017/91601/ELS_PathwayStudio-Fact-Sheet_Transform-Your-Research_June-16.pdf), Pathway Studio has access to more than 4.0M of data-mined full-text articles identified by natural language processing algorithms biological relationships.
The search algorithm for PD biomarkers was as follows:
  • Searching for genes (proteins) linked to PD through reported polymorphism associations. The initial list of genes was acquired using PathwayStudio 12.3 software. Search was performed by adding “Panic Disorder” object and extracting all proteins and complexes linked to “Panic Disorder”. Linkage type: GeneticChange was used. This type allows to search for reported polymorphism-condition associations. In accordance to ResNet and Pathway Studio features, the acquired list included not only protein-encoding genes but microRNA-encoding genes as well, if they are reportedly linked to PD.
  • Acquiring a reference table via “View relation table”. This function provides access to reference IDs and data-mined “Sentences” containing association reports from original articles. On this step additional search was performed using PubMed (http://www.ncbi.nlm.nih.gov/pubmed/), TargetInsights (https://demo.elseviertextmining.com/) and GoogleScholar (https://scholar.google.ru/). A total of 229 references supporting each gene-PD link were identified and taken into further screening.
  • Screening was performed by manually analyzing “Sentences” extracted by Pathway Studio from full-text articles. All Sentences were carefully revised by at least three authors, full texts were manually studied for additional details, if necessary. All irrelevant studies identified in this step were excluded from further analysis. A total of 127 irrelevant studies were identified, including 50 literature reviews with no original experiments; 50 articles on irrelevant topics misinterpreted by text-mining algorithms; 27 studies involving model organisms, and lacking human patient studies.
  • Full texts of 102 remaining articles were manually revised and assessed for eligibility by authors. Original research papers with statistically significant results were taken into the further analysis: positive association of certain gene modification (or one of its variants) with the disease; interaction with another gene; association of genotypes or alleles of different genes; the presence of the mutation in families with high occurrence of the disease; cosegregation of genetic alteration with manifestations of the disease.
    • All articles reporting lack of association were transferred into a separate “No Association” table. This table was analyzed separately (see Step 6). This also included studies reporting an association with the particular symptoms but no association with the disorder in general. A total of 32 articles were excluded due to a lack of significant association.
    • All remaining articles reporting results irrelevant to our study (i.e., treatment response studies) were excluded. A total of 15 articles were excluded due to these reasons.
  • The remaining 55 articles formed the basis of our review. Each paper was manually studied for association availability (significance was assessed by revising p-values). Official gene names, polymorphism IDs, sample sizes, p-values for each association, and other relevant data were manually extracted and revised. All articles reporting significant associations were considered eligible. Small sample size was not considered an exclusion criterion. However, we are aware that the sample size may result in significant bias. To allow estimating this bias we provide sample sizes in the Sample column.
  • After analyzing the articles reporting associations, we performed a manual analysis of the “No Association” table. The analysis was performed by additional full-text revision and extraction of relevant data.
The algorithm scheme, along with the number of articles added or excluded on each step is presented in Figure 1.
Figure 1. Workflow used in the current review and number of articles included or excluded on each step.

3. Results

A total of 229 studies were analyzed, with 127 being excluded during screening and 15 being excluded during other steps. The remaining articles were taken into further analysis and separated into two tables. Table 1 provides the results of the analysis of 55 articles reporting association. Studies reporting lack of association were analyzed separately, results of analyzing 32 studies are provided in Table 2.
Table 1. Known panic disorder biomarkers and obtained by text-mining instruments supporting literature data. nP—number of patients, nC—control sample volume.
Table 2. Genes with no significant association with PD diagnosis reported.

4. Discussion

Our analysis revealed 40 genes linked to PD. Among them, the majority of associations (in 38 genes) were marked by at least one SNP, 3 (5HTR2A, CCKBR, RGS2) had additional repeat/deletion polymorphism markers, 1 (COMT) had additional microsatellite polymorphism marker, and 1 (GAD1) had additional methylation alterations associated with PD. The remaining 2 genes (FOXP3, MAOA) were associated with PD via methylation alterations with no reported associated SNPs.
For the COMT gene, its’ link to PD was supported by 9 studies which may be considered the most reliable or most well-studied gene associated with PD. For the majority (25 out of 40) of associations, the link to PD was supported by just 1 study. Associations of polymorphisms in CCKBR, HTR1A, and TPH2 genes were supported by 3 studies. Remaining associations in genes 5HTR2A, ACE, ADORA2A, ASIC1, CRHR1, GAD1, MAOA, MIR22, NPS, PDE4B, and SLC6A4 were supported by 2 studies.
COMT is also among the top genes by the number of associated polymorphisms, however, it only has 5 associated markers, while SLC6A4 has 8 associated markers and ADORA2A, and TMEM132D have 6 each.
The majority of genes (16 out of 40) have 2 associated polymorphisms, 7 out of 40 have 3 or 4 associated polymorphisms.
Most of the associated genes (68%) are related to the systems of neurotransmitter synthesis/interaction/degradation: ACE, ADORA2A, AVPR1B, CCK, CCKAR, CCKBR, CNR1, CNR2, COMT, CRHR1, DBI, DRD1, GABRA5, GABRA6, GABRB3, GAD1, GHRL, HCRTR2, HTR1A, HTR2A, MAOA, NPS, NPSR1, PBR, PGR, SLC6A4, TPH2.
The rest of the genes can be attributed to the following functional categories:
  • 13%—involved in the regulation of the work of genes (including miRNA); FOXP3, IKBKE, MIR22, MIR339, MIR491.
  • 10%—involved in the reception of extracellular signals and system of secondary messengers functioning; NTRK3, PDE4B, RGS2, TMEM132D.
  • 5%—involved in the general functioning of neurons; ASIC1, BDNF.
  • 5%—not fitting to any of these categories others; GLO1, MBL2.
Among the 30 non-associated genes, 16 are present in both tables while 14 are not present in Table 1.
This data represents studies available via ResNet, Google Scholar, PubMed, and TargetInsight databases. Despite the large number of articles covered, several limitations are present. First of all, some articles may be absent from the listed databases. This means that our analysis is not completely exhaustive. Second, only articles available in English were included.
In our work, we summarized literature data on PD biomarkers. Our review may provide a strong base for creating effective test-systems and predisposition tests for early PD diagnostics. This is especially important for people working or living in stressful conditions, as PD is known to be triggered by environmental factors and causes a severe reduction in quality of life [4,93]. Moreover, our study as well as the following studies may be used to reveal possible pathogenesis mechanisms and signal pathways underlying PD. This knowledge is not just theoretical as it may allow developing a personalized approach for each PD case. Personalized medicine is considered a promising field in the case of PD due to the lack of serious advances in treatment in recent years [94]. We believe that recently proposed for personalized psychiatry machine learning approaches already applied to some PD cases [95] may be even more effective if proper genetic screening is conducted. In light of this, reviewing and systemizing PD biomarkers is the way to bring technology and medicine even closer together and revolutionize the field of personalized psychiatry.

5. Conclusions

The information summarized in our work illustrates current progress in association studies of panic disorder and may indicate possible molecular mechanisms of the pathogenesis of panic disorder. This information can serve as a basis for both further data analysis, novel experimental studies, or creating effective test-systems and personalizing medicine in the future.

Author Contributions

Conceptualization, E.K. and O.R.; work with PathwayStudio, E.K.; literature analysis, A.M., A.T., E.K., and E.N.; writing—original draft preparation, A.M.; writing—review and editing, A.T. and E.K. All authors have read and agreed to the published version of the manuscript.

Funding

The reported study was funded by RFBR, project number 19-34-51045.

Acknowledgments

The authors thank the colleagues from the laboratory for moral support.

Conflicts of Interest

The authors declare no conflict of interest

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