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Article

Flexibility of Poly(alkyl methacrylate)s Characterized by Their Persistence Length Determined through Pyrene Excimer Formation

Institute for Polymer Research, Waterloo Institute for Nanotechnology, Department of Chemistry, University of Waterloo, 200 University Avenue West, Waterloo, ON N2L 3G1, Canada
*
Author to whom correspondence should be addressed.
Polymers 2024, 16(15), 2126; https://doi.org/10.3390/polym16152126
Submission received: 7 July 2024 / Revised: 22 July 2024 / Accepted: 23 July 2024 / Published: 26 July 2024
(This article belongs to the Collection Reviews on Progress in Polymer Analysis and Characterization)

Abstract

:
A series of poly(alkyl methacrylate)s and poly(oligo(ethylene glycol) methyl ether methacrylate)s labeled with 1-pyrenebutanol were referred to as the PyC4-PCnMA samples with n = 1, 4, 6, 8, 12, and 18 and the PyC4-PEGnMA samples with n = 0–5, 9, 16, and 19, respectively. Pyrene excimer formation (PEF) upon the encounter between an excited and a ground-state pyrenyl labels was employed to determine their persistence length (lp) in o-xylene. The fluorescence decays of the PyC4-PCnMA and PyC4-PEGnMA samples were acquired and analyzed with the fluorescence blob model to yield the number (Nblob) of structural units in the volume probed by an excited pyrenyl label. Nblob was found to decrease with an increasing number (NS) of non-hydrogen atoms in the side chain, reaching a plateau for the PyC4-PEGnMA samples with a longer side chain (n = 16 and 19). The Nblob values were used to determine lp. The lp values for the PyC4-PCnMA and PyC4-PEGnMA samples increased linearly with increasing NS2 as predicted theoretically, which agreed with the lp values obtained by viscometry for a series of PCnMA samples. The good agreement between the lp values retrieved by PEF and viscometry served to validate the PEF-based methodology for determining lp for linear polymers.

1. Introduction

Backbone flexibility represents an important parameter in the characterization of a polymer. It affects its glass transition, which defines whether a plastic will be used as a hard (brittle) plastic or a rubbery elastomer at temperatures below or above its glass transition temperature (Tg), respectively [1]. More specifically, a stiffer backbone like that of polystyrene yields a higher glass transition temperature (Tg) of +100 °C [2] compared to that of a polymer with a more flexible backbone like poly(ethylene oxide) with a Tg of −53 °C [3,4]. Furthermore, more flexible polymeric backbones enable more contacts and interactions between the structural units (SU) constituting the polymer. This matters for polypeptides like proteins where the flexibility of the polypeptidic backbone promotes interactions between amino acids, which lead to the formation of specific secondary structures, eventually leading to the folded protein. For instance, more flexible polypeptides containing glycine [5] and alanine [6] generate more contacts between amino acids, which results in longer protein folding times [7]. Another property affected by polymer backbone flexibility is the stiffness of the resulting polymeric material defined by its modulus. Direct relationships between the modulus of a polymeric material and the persistence length (lp)—a physical measure of polymer backbone flexibility—have been proposed theoretically [8,9,10] and observed experimentally for semi-rigid linear chains like polymeric bottlebrushes [11] and DNA [12]. Backbone flexibility can also be taken advantage of to control the expansion of a polymer coil upon increasing the solution temperature or adjusting its contour length as it interacts with the surface of wax crystals, which is being done with the poly(alkyl methacrylate)s (PCnMA) used, as viscosity index improvers (VII) or pour point depressants (PPD), respectively, by the oil additive industry [13]. These examples illustrate the importance of polymer backbone flexibility and how it impacts polymer properties for diverse applications.
Polymer backbone flexibility can be described by the persistence length (lp), which represents the distance between a reference point and a secondary point taken along the contour length (Lc) of the polymer chain, where the vector tangent to the chain at the secondary point has lost its orientation with respect to the original orientation of the vector tangent to Lc at the reference point. Traditionally, lp has been determined through the analysis of conformational plots generated by measuring the intrinsic viscosity ([η]) by viscometry [14] or the radius of gyration (RG) by scattering techniques [15,16] for a series of polymer samples prepared with a narrow molecular weight distribution (MWD) and dissolved in a θ-solvent. Unfortunately, many polymers cannot be prepared with a narrow MWD. For these polydisperse polymer samples, a gel permeation chromatography (GPC) instrument equipped with a light scattering or viscosity detector can be used to obtain [η] or RG as a function of molecular weight, which can then be used to build the corresponding conformational plots [17,18]. Unfortunately, GPC instruments require careful calibration and are typically operated with the same solvent in which the polymers of interest might not be soluble, and the polymers might not interact with the packing material of the GPC columns, so that the GPC trace truly reflects the MWD of the polymer sample.
The difficulties encountered in accommodating all these experimental requirements rationalize why lp remains unknown for many polymer backbones and justify the search and development of methodologies based on techniques other than viscometry, scattering, and GPC to determine lp. One such methodology is based on pyrene excimer formation (PEF) between excited and ground-state pyrenyl labels, which are randomly and covalently attached onto a polymer [19,20]. Pyrene was selected over other excimer-forming fluorophores like naphthalene or perylene for the following reasons. The four aromatic rings of pyrene enable much more efficient excimer formation than naphthalene with only two aromatic rings [21], and the fluorescence of the pyrene monomer and excimer are well-resolved, allowing their separate detection in the fluorescence spectrum, which is not the case for perylene with its five aromatic rings [22].
The methodology based on PEF takes advantage of the fact that since a pyrenyl label attached to a polymer chain remains excited for a finite and short period of time (<1 μs), it can only probe a volume referred to as a blob, which is much smaller than the polymer coil. Since each pyrenyl label probes the same blob, the polymer coil can be divided into a cluster of identical blobs, among which the randomly attached pyrenyl labels distribute themselves according to a Poisson distribution. The fluorescence blob model (FBM) can then be applied to fit the fluorescence decays acquired with the pyrene-labeled polymer and to determine the number (Nblob) of SU that are encompassed inside a blob. Multiplying Nblob by the length (b) of a SU yields the contour length (Lc) of the polymer segment inside a blob whose squared end-to-end distance (<rEE2>blob) represents the square of the blob diameter (see Figure 1). Conducting these PEF experiments with a series of poly(oligo(ethylene glycol) methyl ether methacrylate)s labeled with 1-pyrenebutanol (PyC4-PEGnMA) [19], Nblob was found to decrease with an increasing side chain length (n), reflecting the extension of the main chain. A plateau was reached for n equal to 16 and 19, corresponding to a fully extended polymethacrylate backbone over a length scale defined by a blob. Since a blob remains the same for a given polymer family, <rEE2>blob could be determined by taking Nblob in the plateau region as Nblob, corresponding to the Nblob value of a fully extended polymethacrylate backbone yielding <rEE2>blob = (Nblob × b)2. Unfortunately, <rEE2>blob was also found to decrease with increasing solvent viscosity as a consequence of PEF being diffusion-controlled, with a higher solvent viscosity reducing the reach of a pyrenyl label and <rEE2>blob. Fortunately, this detrimental effect could be eliminated by selecting organic solvents with a viscosity of 0.74 (±0.08) mPa.s at 25 °C, for which Nblob would equal 12 [19].
Because the blobs are much smaller than the polymer coil, Nblob takes values that are usually smaller than 100, which are small enough to ensure that Nblob is not affected by the solvent quality toward the polymer. Such conditions enable the application of the Kratky–Porod equation given in Equation (1) after being modified to reflect the confinement of a polymer segment inside a blob (see Figure 1) [23]. With Nblob known experimentally from the PEF measurements and Nblob and b being equal to, respectively, 12 [19] and 0.25 nm [24,25] for a methacrylate monomer, Equation (1) could be solved to retrieve lp for the PyC4-PEGnMA samples in N,N-dimethylformamide (DMF) with a suitable 0.79 mPa.s solvent viscosity. lp was found to increase linearly from 0.43 nm for PEG0MA (i.e., poly(methyl methacrylate)) to 1.8 nm for PEG5MA with the square of the number of non-hydrogen atoms in the side chain (NS2) of a PEGnMA sample as predicted theoretically [26].
< r E E 2 > b l o b   =   ( N b l o b × b ) 2   =   2 l p ( b × N b l o b )     2 l p 2 1     exp b × N b l o b l p
While the lp values retrieved for the PEGnMA samples in DMF by applying this PEF-based methodology were encouraging, they were the first lp values reported for PEGnMA samples and could not be compared to already published lp values. To validate the PEF-based methodology, the present study describes its application to a series of poly(alkyl methacrylate)s randomly labeled with 1-pyrenebutanol (PyC4-PCnMA with n = 1, 4, 6, 8, 12, and 18) to determine lp for the PCnMA samples and compare them with already published lp values obtained by viscometry [14]. The PEF experiments were conducted in o-xylene, which could solubilize all the PyC4-PCnMA samples and had a suitable viscosity of 0.76 mPa.s to ensure that Nblob equaled 12 [19]. The lp values determined by PEF and viscometry [14] for the PCnMA samples were in good agreement, supporting the notion that the PEF-based methodology can be employed for lp determination. The lp values obtained with the PyC4-PCnMA samples in o-xylene were also compared to the lp values obtained for the PyC4-PEGnMA samples in o-xylene and DMF [19] as well as those obtained for a series of PEGnMA in DMF where the pyrenyl labels were connected to the polymethacrylate backbone via a penta(ethylene glycol) linker (PyEG5-PEGnMA) [20]. The good agreement observed between the lp values obtained for these different polymethacrylate samples with different side chain compositions in DMF for the PyC4-PEGnMA and PyEG5-PEGnMA samples, in o-xylene for the PyC4-PEGnMA and PyC4-PCnMA samples, and polymethacrylate backbones labeled with different pyrene derivatives indicates that the PEF-based methodology for determining lp is robust.
While the pyrene-labeling requirement for PEF experiments conducted on macromolecules is a disadvantage compared to techniques like viscometry [14], scattering [15,16], or GPC [17,18] that can characterize a macromolecule without chemical post-modification, the extreme sensitivity of fluorescence enables the study of pyrene-labeled macromolecules in the 0.1–50 mg/L range, 3 to 4 orders of magnitude lower than what is currently achievable by the more conventional techniques. Consequently, this study demonstrates that the PEF-based methodology is a robust technique for probing the conformation of macromolecules, and because it can operate with extremely dilute solutions, it can effectively complement the more traditional characterization techniques under conditions requiring improved sensitivity, such as those encountered for macromolecules located at interfaces.

2. Materials and Methods

Chemicals: The synthesis and characterization of the poly(alkyl methacrylate)s labeled with 1-pyrenebutanol (PyC4-PCnMA with n = 1, 4, 6, 8, 12, and 18) and the poly(oligo(ethylene glycol) methyl ether methacrylate) labeled with either 1-pyrenebutanol (PyC4-PEGnMA with n = 0–5, 9, 16, and 19) or 1-pyrenemethoxypenta(ethylene glycol) (PyEG5-PEGnMA with n = 0, 3–5, 7, 9, and 19) were presented in the references [19,20,27], respectively. Their chemical structure is shown in Table 1. o-Xylene was purchased from Sigma-Aldrich (St. Louis, MO, USA).
UV-Vis Absorption: Absorption spectra of solutions of the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene were acquired with a Cary 100 UV-Visible spectrophotometer to ensure that the absorbance at 344 nm was equal to 0.1, corresponding to a concentration of pyrenyl labels of 2.5 × 10−6 M and a less than 50 mg/L concentration of pyrene-labeled polymer. Such low polymer concentrations ensure that no intermolecular PEF takes place.
Steady-State Fluorescence: All PyC4-PCnMA and PyC4-PEGnMA solutions in o-xylene were degassed with a gentle flow of nitrogen for 50 min before acquiring the fluorescence spectra and decays. A HORIBA QM-400 spectrofluorometer fitted with a xenon arc lamp was employed to acquire the fluorescence spectra of the PyC4-PCnMA and PyC4-PEGnMA solutions from 350 to 600 nm. The solutions were excited at 344 nm. Analysis of the fluorescence spectra yielded the IE/IM ratio obtained by integrating the fluorescence spectra from 376 to 382 nm and from 500 to 530 nm to determine the monomer (IM) and excimer (IE) fluorescence intensity, respectively, before dividing IE by IM.
Time-Resolved Fluorescence: The degassed solutions of PyC4-PCnMA and PyC4-PEGnMA in o-xylene were excited at 344 nm with a 340 nm NanoLED fitted to the excitation monochromator set at 344 nm of an IBH Ltd. time-resolved fluorometer with a 500 kHz repetition rate and a 2.04 ns time-per-channel to obtain their fluorescence decays at 379 and 510 nm for the pyrene monomer and excimer, respectively. The monomer and excimer fluorescence decays were acquired with cut-off filters at 370 and 495 nm placed before the emission monochromator to minimize stray light from reaching the detector and with 40,000 and 20,000 counts at the decay maximum, respectively. The beam from the NanoLED was reflected off a triangular aluminum monolith and passed through the emission monochromator set at 344 nm to obtain the instrument response function (IRF).
Fluorescence Decay Analysis: The fluorescence blob model (FBM) was applied to fit globally the fluorescence decays of the pyrene monomer and excimer of the PyC4-PCnMA and PyC4-PEGnMA solutions in o-xylene [19,20]. The FBM acknowledges that, while it remains excited, a pyrenyl label only probes a finite subvolume of the polymer coil, referred to as a blob, which is used to compartmentalize the polymer coil into a cluster of identical blobs where the pyrenyl moieties distribute themselves randomly according to a Poisson distribution. The main parameters retrieved from the FBM analysis of the decays are the rate constant (kblob) for diffusive encounters taking place inside a blob between two structural units (SU) bearing an excited (Pydiff*) and a ground-state pyrenyl labels, the average number <n> of ground-state pyrenyl groups inside a blob, and the product ke × [blob] of the rate constant (ke) representing the exchange of pyrene groups between blobs and the blob concentration ([blob]) inside the polymer coil. Upon encounter between two SU bearing excited and ground-state pyrenes, the excited pyrene Pydiff* turns into the species Pyk2*, which reacts rapidly with the ground-state pyrene with the large rate constant k2 (~10 × kblob) to form one of the two excimers E0* or D*. E0* and D* represent pyrenyl labels that form an excimer with a well- or poorly stacked ground-state pyrene, resulting in a short or long excimer lifetime τE0 or τD, respectively. The fifth pyrene species accounts for the pyrenyl pendants that are isolated along the polymer, which cannot form excimer and emit as if they were free in solution (Pyfree*). The molar fractions fdiff, fk2, and ffree represent the contributions from the species Pydiff*, Pyk2*, and Pyfree*, respectively, while the combined contribution of the pre-aggregated pyrene species E0* and D* are represented by the molar fraction fagg.
The mathematical expressions used to fit the fluorescence decays of the pyrene monomer and excimer are presented as Equations (S1) and (S2) in Supplementary Materials, respectively, after they had been convoluted with the IRF. The parameters used in Equations (S1) and (S2) were optimized according to the Marquardt-Levenberg algorithm [28] and these parameters retrieved from the global FBM analysis of the fluorescence decays are listed in Tables S1–S4. These FBM analyses were first conducted with the program globmis90gbg using a floating k2. The k2 values obtained by globally fitting the pyrene monomer and excimer fluorescence decays of all the PyC4-PCnMA or PyC4-PEGnMA samples for an n-value of a given polymer series were averaged. The analysis of these fluorescence decays was then repeated with the program globmis90bbg where k2 was fixed to its average value. This procedure has been shown to retrieve the other parameters with much greater accuracy [29]. A listing of the programs globmis90gbg and globmis90bbg written in Fortran is provided as Supplementary Materials.
The size of a blob could be determined from the number (Nblob) of SU constituting a blob according to Equation (2). Equation (2) combines the molar fraction of SU bearing a pyrenyl label in the PyC4-PCnMA and PyC4-PEGnMA samples, which had been determined earlier [19,27], the molar fraction (fMfree) of Pyfree* species detected in the pyrene monomer fluorescence decays, and the average number (<n>) of pyrenyl labels per blob.
N b l o b = ( 1 f M f r e e ) × < n > x

3. Results

As described in the Introduction, the application of PEF to retrieve the persistence length (lp) for the linear polymers PyC4-PEGnMA and PyEG5-PEGnMA requires a solvent with a viscosity equal to 0.74 (±0.08) mPa.s at 25 °C [19]. While the PEGnMA samples are soluble in many organic solvents, which enabled the identification of DMF with a 0.79 mPa.s viscosity as a suitable solvent for determining lp by PEF measurements, dissolving a series of PCnMA samples with different alkyl chain lengths (n) in a same solvent is challenging. The difference in solubility between PCnMA and PEGnMA samples arises from the difference in polarity between the relatively polar polymethacrylate backbone and the pronounced decrease in the polarity of the samples experienced upon increasing the length (n) of the alkyl side chain for the PCnMA samples [13]. Many polar solvents like DMF, where PCnMA samples with small n values like poly(methyl methacrylate) (PC1MA) are soluble, cannot solubilize PCnMA samples with large n values such as poly(stearyl methacrylate) (PC18MA). The reverse holds true for apolar solvents like hexane, where PC18MA is soluble but PC1MA is not. Fortunately, all PCnMA samples are soluble in aromatic solvents like toluene (η = 0.56 mPa.s at 25 °C [19]) or o-xylene (η = 0.76 mPa.s at 25 °C [30]). Since the viscosity of o-xylene falls within the 0.74 (±0.08) mPa.s range required to retrieve lp by PEF, the PyC4-PCnMA and PyC4-PEGnMA samples were studied in o-xylene to characterize their fluorescence properties and determine their persistence length.

3.1. Analysis of the Fluorescence Spectra

The fluorescence spectra of the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene were acquired. Typical fluorescence spectra obtained for the PyC4-PC4MA and PyC4-PEG1MA series in o-xylene are presented in Figure 2A and Figure 2B, respectively, after being normalized at the 379 nm peak corresponding to the 0-0 transition of pyrene. The fluorescence spectra showed the spectral features expected for pyrene-labeled macromolecules, with the pyrene monomer exhibiting sharp peaks between 370 and 410 nm and the excimer emitting a broad structureless fluorescence centered at 480 nm. The fluorescence intensity of the pyrene excimer was found to increase relative to the fluorescence intensity of the pyrene monomer with increasing pyrene content as a result of increased pyrene-pyrene encounters. Similar figures were obtained for the fluorescence spectra of all the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene.
The IE/IM ratios were determined from the analysis of the fluorescence spectra, and they were plotted as a function of pyrene content in Figure 3A and Figure 3B for the PyC4-PCnMA and PyC4-PEGnMA samples, respectively. After the pyrene content reached an onset value, corresponding to the point where all the blobs along the polymethacrylate backbone contained at least one pyrenyl label, IE/IM increased with increasing pyrene content, reflecting a higher encounter frequency between the pyrenyl labels. Approximating the increase in IE/IM with increasing pyrene content as a straight line, the slope of those trends could be determined and was taken as the PEF efficiency (EPEF), which was plotted as a function of the molecular weight of a structural unit (MWSU) in Figure 3C for both series of PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene. Within experimental error, the same EPEF-vs.-MWSU trends were obtained for the PyC4-PCnMA and PyC4-PEGnMA series in o-xylene, reflecting the similar behavior of the two polymeric constructs despite the different polarity between the apolar alkyl and polar oligo(ethylene glycol) side chains.
EPEF decreased with increasing MWSU in Figure 3C until it reached a plateau for the PyC4-PEGnMA samples with a longer side chain. This behavior reflects the extension of the polymethacrylate backbone induced by the stronger steric hindrance generated by the longer side chains. As the length of the side chains increased further, their effect on the polymethacrylate backbone decreased until a further increase in side chain length no longer affected the conformation of the backbone, at which point EPEF remained constant. The trend described for EPEF as a function of MWSU in Figure 3C indicates that PEF between the 1-pyrenebutyl groups bound to the polymethacrylate backbone reflects the backbone extension experienced by the PyC4-PCnMA and PyC4-PEGnMA samples as their side chain length is increased. Since the PEF signal displayed by these pyrene-labeled polymers reflects their conformation in solution, it must contain information about their persistence length. Indeed, the persistence length of these polymers can be determined through the analysis of their fluorescence decays, as described in the following section.

3.2. Fluorescence Decay Analysis

The fluorescence decays of the pyrene monomer and excimer were acquired for all the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene before being fitted globally according to the FBM with Equations (S1) and (S2) provided as Supplementary Materials. The quality of the fit was assessed from a χ2 value of less than 1.3 and the visual inspection of the random distribution around zero of the residuals and the autocorrelation of the residuals are illustrated in Figure 4. The parameters retrieved from these analyses are presented in Tables S1 and S2 as Supplementary Materials.
Among these parameters were the average number <n> of pyrenyl labels per blob and the molar fraction (fMfree) of pyrenyl labels unable to form an excimer. These parameters were detected in the pyrene monomer fluorescence decay; they were combined in Equation (2) with the molar fraction (x) of pyrenyl labels attached to the polymers to yield the number (Nblob) of SU inside a blob. Nblob was plotted as a function of the pyrene content for the different series of PyC4-PCnMA and PyC4-PEGnMA samples in Figure 5A and Figure 5B, respectively. Within experimental error, Nblob remained constant with pyrene content for all polymer samples, indicating that covalent attachment of the pyrene labels did not affect the behavior of the polymers. Averaging the Nblob values over all pyrene contents obtained for the same series of PyC4-PCnMA or PyC4-PEGnMA samples in o-xylene yielded <Nblob>, which was plotted as a function of the molecular weight of a structural unit (MWSU) in Figure 5C. The trend obtained earlier for the PyC4-PEGnMA samples in DMF was added to Figure 5C [19].
As was previously observed for the PyC4-PCnMA samples in toluene and THF and for the PyC4-PEGnMA samples in a variety of solvents [19], <Nblob> for the PyC4-PCnMA samples in o-xylene was found to decrease with increasing side chain length in Figure 5C reflecting the increased extension of the polymethacrylate backbone induced by the steric hindrance generated by the alkyl side chains. Within experimental error, the trends obtained for the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene presented in Figure 5C overlapped, indicating that both polymer families shared a similar conformation in o-xylene that extended with increasing side chain length. But although the preparation of the PyC4-PCnMA was limited to an n value of 18, the side chains of the PyC4-PEGnMA samples could be extended up to an n value of 19 representing a side chain with a number (NS) of non-hydrogen atom equal to 60 after including the atoms of the ester bond. As had been observed in other solvents, <Nblob> for the PyC4-PEGnMA samples with n = 16 and 19 did not change, indicating that the backbone was fully extended. Furthermore, Nblob in Figure 3C obtained for the PyC4-PEGnMA samples with n = 16 and 19 equaled 12 (±2), as would be expected for an extended polymethacrylate backbone in a solvent with a viscosity of 0.74 (±0.08) mPa.s such as for o-xylene (η = 0.76 mPa.s) [19].
An earlier study established that the <Nblob>-vs.-MWSU trends obtained for the PyC4-PEGnMA samples in six different solvents was well-represented by a master equation depending solely on the solvent viscosity and MWSU [19]. This master equation resulted in the solid line drawn in Figure 5C, which represents the predicted Nblob-vs.-MWSU trend for the PyC4-PEGnMA samples in o-xylene. As expected, the experimental <Nblob> values for the PyC4-PEGnMA samples clustered around the predicted trend in Figure 5C. More surprisingly, considering the difference in polarity between the apolar alkyl side chains of the PyC4-PCnMA samples compared to the polar side chains of the PyC4-PEGnMA samples, the <Nblob> values obtained for both polymer series in o-xylene clustered around the master curve. Similarly, the <Nblob> values reported earlier for PyC4-PEGnMA in DMF, whose 0.79 mPa.s solvent viscosity was close to that of 0.76 mPa.s for o-xylene, also clustered around the Nblob-vs.-MWSU master trend in Figure 5C. The similar <Nblob>-vs.-MWSU trends shown in Figure 5C for the PyC4-PCnMA samples in o-xylene and for the PyC4-PEGnMA samples in o-xylene and DMF suggest that these polymers share the same polymethacrylate backbone and linear side chains adopt a same conformation that depends solely on the side chain length through MWSU.
Equation (1) was then applied to extract the persistence length (lp) from the <Nblob> values presented in Figure 5C for the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene using b and Nblob equal to 0.25 nm [14] and 12 [19], respectively. The lp values obtained for the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene, the PyC4-PEGnMA [19], and PyEG5-PEGnMA [20] samples in DMF and those obtained by viscometry for a series of PCnMa samples [14] were plotted as a function of the squared number of non-hydrogen atoms in the side chains (NS2). The solid line in Figure 6 is predicted after solving Equation (1) for Nblob values obtained from PyC4-PEGnMA samples dissolved in a hypothetical solvent with a viscosity of 0.74 mPa.s [19]. While the data presented in Figure 6 exhibit some scatter, they all clustered around the solid line, indicating a linear increase in lp as a function of NS2 in agreement with theoretical predictions [26]. The overall agreement between the lp values retrieved with different techniques (viscometry and PEF) for different families of polymers (poly(alkyl methacrylate)s and poly(oligo(ethylene glycol) methyl ether methacrylate)s) probed with different pyrene derivatives (1-pyrenebutanol and 1-pyrenemethoxy-penta(ethylene glycol)), and in different solvents (DMF and o-xylene) with a viscosity approaching that of 0.74 (±0.08) mPa.s suggest that the PEF-based methodology introduced earlier is robust and can be applied to determine lp for polymers.

4. Discussion

The recent demonstration that PEF can probe the local density, and thus the conformation of macromolecules in solution [31], was taken advantage of in the present study to characterize the persistence length of a series of PyC4-PCnMA samples. The good agreement observed between the persistence lengths determined with different techniques and polymeric constructs in Figure 6 suggests that the methodology is robust. Since the present study confirms that PEF provides quantitative information about macromolecular conformations, the strengths and limitations of the PEF-based methodology are now discussed in comparison with the more traditional techniques already available.
Certainly, the main disadvantage of the PEF-based methodology described herein is the requirement that the macromolecule of interest is randomly labeled with pyrene, which imposes an additional synthetic step compared to techniques such as viscometry [14] or scattering [15,16], which use the macromolecule “as prepared”. Fortunately, the labeling must be random, which is much easier to accomplish compared to the specific end-labeling, which is typically required for quantitative studies of linear chains [32,33,34,35,36]. Random pyrene labeling can be achieved via grafting through, as is performed in the present and earlier studies [19,20,27,37] or grafting to as with polypeptides [38,39] or polysaccharides [40,41]. While random pyrene labeling can be fairly easily implemented, this extra synthetic step would not be needed with scattering or viscometry experiments.
Another limitation in the PEF-based methodology is the range of lp values that can be retrieved. Since lp is derived by using Nblob in Equation (1), lp becomes more challenging to determine when Nblob approaches Nblob, at which point lp tends to infinity. As shown in Figure 5C, <Nblob> ranges from 42 (±4) for PyC4-PC1MA to 18 (±2) for PyC4-PC18MA, the latter value approaching the Nblob value of 12. In fact, a 1.65 nm lp value was obtained for PyC4-PC18MA with NS2 = 400, which would have been off the straight line in Figure 6, suggesting that the <Nblob> value of 18 for PC4-PC18MA might be too close to Nblob to recover an accurate lp. Larger Nblob values can be retrieved by using a pyrene derivative with a longer linker since a longer linker enables a pyrenyl label to probe a larger blob resulting in a larger Nblob value [37,39]. However, the linker should not be too long, as in the case of the penta(ethylene glycol) linker used for the PyEG5-PEGnMA samples, which could not fully deploy during the time a pyrenyl label remained excited despite the long lifetime of pyrene [20]. NblobMMO obtained from molecular mechanics optimization (MMO) for the PyEG5-PEGnMA samples was found to equal 41, whereas <Nblob> only equaled 23 (±2) for the “fully extended” PyEG5-PEG19MA sample [42], a clear indication that the pyrenyl label did not have sufficient time to fully deploy in solution. In summary, the PEF-based methodology is unlikely to yield the persistence length of stiff polymeric backbones like that of DNA or a-helical poly(L-glutamic acid). Nevertheless, the still unknown persistence length of numerous polymers with more flexible backbones could be determined with the PEF-based methodology described in this report.
Another complication associated with PEF-based experiments is that the macromolecule under study should be photochemically inert over the range of wavelengths involved for the PEF experiments, with the pyrene derivatives being typically excited at 344 nm and their fluorescence being monitored between 360 and 600 nm (see Figure 2). This condition precludes the application of PEF to fullerenes, carbon nanotubes, and many conjugated polymers whose spectral features interfere with those of pyrene.
Despite these drawbacks, the PEF-based methodology offers several advantages that should be considered over the more traditional techniques. The first one is that the use of a blob as a unit volume, which is much smaller than the polymer coil, makes the methodology impervious to the polydispersity of the polymer sample. Since a large or short polymer chain is described by many or few identical blobs, respectively, the focus of the study is shifted from the entire population of polydisperse chains to that of identical monodisperse blobs. This aspect represents a major advantage of the PEF-based methodology since it enables the study of polydisperse samples such as the PyC4-PCnMA and PyC4-PEGnMA samples investigated herein. Such polymer samples would otherwise be more challenging to characterize by scattering or viscosity experiments, which are much more sensitive to sample polydispersity.
The second advantage is the extreme sensitivity of PEF. Solutions with concentrations of pyrene-labeled polymers as low as 0.5 mg/L yield enough fluorescence signal to acquire the fluorescence spectra and decays required for a fluorescence analysis. While the use of traditional techniques such as scattering or viscometry always requires the extrapolation of trends obtained as a function of polymer concentration to zero-polymer concentration, this extrapolation step is irrelevant in fluorescence experiments since these experiments are conducted at polymer concentrations that are so low that they are equivalent to zero-polymer concentrations. This feature is most advantageous when working with macromolecules that are subject to intermacromolecular long-range electrostatic forces for protonated PAMAM dendrimers [43] or are poorly soluble and might aggregate by working at higher concentrations. Consequently, and like any other technique, the PEF-based methodology described in this report possesses disadvantages and advantages that need to be considered before deciding on its application for the study of a macromolecule.

5. Conclusions

Although the chemical composition of the PyC4-PCnMA and PyC4-PEGnMA samples is quite different, with the side chains of the latter and former polymers being polar oligo(ethylene glycol) and apolar alkyl chains, both polymers shared similar conformations in solvents where they were both soluble, such as in THF [19], toluene [19], and now o-xylene based on their similar <Nblob>-vs.-MWSU trends. Furthermore, the fact that the <Nblob>-vs.-MWSU trend obtained for PyC4-PEGnMA in DMF overlapped those of PyC4-PCnMA and PyC4-PEGnMA in o-xylene further supported the notion that these trends depended solely on the solvent viscosity (and not its nature) and MWSU, as shown in Figure 5C. This outcome resulted from the similar architecture displayed by these polymer samples, which shared a common polymethacrylate backbone and linear side chains.
The similar conformations expected from the <Nblob>-vs.-MWSU trends shown in Figure 5C for the PyC4-PCnMA and PyC4-PEGnMA samples in o-xylene were confirmed by applying Equation (1) to extract lp. lp was found to increase linearly with increasing NS2 in Figure 6, as expected from theoretical predictions [26]. Within experimental error, all lp-vs.-NS2 trends shown in Figure 6 agreed with each other, confirming the ability of these PEF experiments to retrieve lp. Furthermore, the lp values obtained from the PEF experiments with the PyC4-PCnMA samples in o-xylene were in good agreement with those reported for PCnMA samples obtained by viscometry, which validated the lp values retrieved from PEF measurements. Consequently, this study confirms the capability of PEF experiments to characterize the conformation of linear chains in solution through the determination of lp. By taking advantage of fluorescence to conduct these experiments at very low polymer concentrations, the PEF-based methodology described herein complements the more traditional techniques, such as viscometry, scattering, and GPC, which are also used to determine lp but at usually much higher polymer concentrations.

Supplementary Materials

The following supporting information can be downloaded at https://www.mdpi.com/article/10.3390/polym16152126/s1, Equations used for the fluorescence blob model (FBM) analysis of the fluorescence decays, lists of parameters retrieved from the FBM analysis of the fluorescence decays, and listings of the programs globmis90gbg and globmis90bbg.

Author Contributions

K.L. oversaw the experiments conducted by G.M. and R.G.; K.L. wrote the first draft of the manuscript and conducted all the missing experiments. G.M. and R.G. carried out all the experiments with the PyC4-PCnMA PyC4-PEGnMA samples in o-xylene, respectively. H.L. provided the mathematical equations for Nblob used in Figure 5C and purified some of the PyC4-PEGnMA samples, which were deemed to contain too many unattached pyrenyl labels. J.D. acquired funding, proposed the methodology, oversaw the project, and reviewed and edited the manuscript for submission. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by the Natural Science and Engineering Research Council (NSERC) of Canada (RGPIN-2024-03897) and the ACS Petroleum Research Fund (PRF # 65100-ND7).

Institutional Review Board Statement

Not Applicable.

Data Availability Statement

Data are contained within the article and Supplementary Materials.

Conflicts of Interest

The authors declare no conflicts of interest.

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Figure 1. Schematic representation of a blob made of Nblob structural units represented as blue beads of length b with a contour length Lc equal to Nblob × b and a squared end-to-end distance <rEE2> equal to (Nblob × b)2. The excited pyrenyl label is indicated by a star.
Figure 1. Schematic representation of a blob made of Nblob structural units represented as blue beads of length b with a contour length Lc equal to Nblob × b and a squared end-to-end distance <rEE2> equal to (Nblob × b)2. The excited pyrenyl label is indicated by a star.
Polymers 16 02126 g001
Figure 2. Fluorescence spectra of (A) the PyC4-PC4MA samples (from bottom to top: x = 0.003, 0.022, 0.030, 0.053, and 0.072) and (B) PyC4-PEG1MA samples (from bottom to top: x = 0.001, 0.038, 0.053, 0.075) in o-xylene. [Py] = 2.5 × 10−6 M, λex = 344 nm.
Figure 2. Fluorescence spectra of (A) the PyC4-PC4MA samples (from bottom to top: x = 0.003, 0.022, 0.030, 0.053, and 0.072) and (B) PyC4-PEG1MA samples (from bottom to top: x = 0.001, 0.038, 0.053, 0.075) in o-xylene. [Py] = 2.5 × 10−6 M, λex = 344 nm.
Polymers 16 02126 g002
Figure 3. Plots of IE/IM as a function of pyrene content for (A) the PyC4-PCnMA for n = (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 4, (Polymers 16 02126 i006) 6, (Polymers 16 02126 i007) 8, (Polymers 16 02126 i008) 12, and (Polymers 16 02126 i009) 18 and (B) the PyC4-PEGnMA samples for n = (×) 0, (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 2, (Polymers 16 02126 i006) 3, (Polymers 16 02126 i007) 4, (Polymers 16 02126 i008) 5, (Polymers 16 02126 i009) 9, (Polymers 16 02126 i010) 16, and (Polymers 16 02126 i011) 19 in o-xylene and (C) EPEF as a function of the molecular weight of a structural unit (MWSU) for the (Polymers 16 02126 i012) PyC4-PCnMA and (Polymers 16 02126 i013) PyC4-PEGnMA samples.
Figure 3. Plots of IE/IM as a function of pyrene content for (A) the PyC4-PCnMA for n = (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 4, (Polymers 16 02126 i006) 6, (Polymers 16 02126 i007) 8, (Polymers 16 02126 i008) 12, and (Polymers 16 02126 i009) 18 and (B) the PyC4-PEGnMA samples for n = (×) 0, (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 2, (Polymers 16 02126 i006) 3, (Polymers 16 02126 i007) 4, (Polymers 16 02126 i008) 5, (Polymers 16 02126 i009) 9, (Polymers 16 02126 i010) 16, and (Polymers 16 02126 i011) 19 in o-xylene and (C) EPEF as a function of the molecular weight of a structural unit (MWSU) for the (Polymers 16 02126 i012) PyC4-PCnMA and (Polymers 16 02126 i013) PyC4-PEGnMA samples.
Polymers 16 02126 g003
Figure 4. Fluorescence decays of (left, lem = 379 nm) the pyrene monomer and (right, lem = 510 nm) the pyrene excimer for the PyC4-PC4MA sample labeled with 7.2 mol% of pyrene. Lex = 344 nm, [Py] = 2.5 × 10−6 M, χ2 = 1.20. In top panels: square: IRF, circles: experimental fluorescence decay, solid line: decay fit.
Figure 4. Fluorescence decays of (left, lem = 379 nm) the pyrene monomer and (right, lem = 510 nm) the pyrene excimer for the PyC4-PC4MA sample labeled with 7.2 mol% of pyrene. Lex = 344 nm, [Py] = 2.5 × 10−6 M, χ2 = 1.20. In top panels: square: IRF, circles: experimental fluorescence decay, solid line: decay fit.
Polymers 16 02126 g004
Figure 5. Plot of Nblob as a function of pyrene content for the (A) PyC4-PCnMA for n = (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 4, (Polymers 16 02126 i014) 6, (Polymers 16 02126 i015) 8, (Polymers 16 02126 i016) 12, and (Polymers 16 02126 i017) 18 and (B) PyC4-PEGnMA for n = (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 2, (Polymers 16 02126 i014) 3, (Polymers 16 02126 i015) 4, (Polymers 16 02126 i016) 5, (Polymers 16 02126 i017) 9, (Polymers 16 02126 i012) 16, and (Polymers 16 02126 i013) 19 in o-xylene and (C) comparison of the averaged <Nblob> value of (Polymers 16 02126 i005) PyC4-PCnMA in o-xylene and PyC4-PEGnMA in (Polymers 16 02126 i004) o-xylene and (×) DMF as a function of the molecular weight of a structural unit (MWSU). The solid line represents the predicted Nblob-vs.-MWSU trend for a 0.76 mPa.s solvent viscosity [19].
Figure 5. Plot of Nblob as a function of pyrene content for the (A) PyC4-PCnMA for n = (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 4, (Polymers 16 02126 i014) 6, (Polymers 16 02126 i015) 8, (Polymers 16 02126 i016) 12, and (Polymers 16 02126 i017) 18 and (B) PyC4-PEGnMA for n = (Polymers 16 02126 i004) 1, (Polymers 16 02126 i005) 2, (Polymers 16 02126 i014) 3, (Polymers 16 02126 i015) 4, (Polymers 16 02126 i016) 5, (Polymers 16 02126 i017) 9, (Polymers 16 02126 i012) 16, and (Polymers 16 02126 i013) 19 in o-xylene and (C) comparison of the averaged <Nblob> value of (Polymers 16 02126 i005) PyC4-PCnMA in o-xylene and PyC4-PEGnMA in (Polymers 16 02126 i004) o-xylene and (×) DMF as a function of the molecular weight of a structural unit (MWSU). The solid line represents the predicted Nblob-vs.-MWSU trend for a 0.76 mPa.s solvent viscosity [19].
Polymers 16 02126 g005
Figure 6. Plot of the persistence length (lp) as a function of the squared number of non-hydrogen atoms in the side chain (NS2) determined by (Polymers 16 02126 i004) viscometry for PCnMA [14] and PEF for (Polymers 16 02126 i005) PyC4-PCnMA in o-xylene, (Polymers 16 02126 i018) PyC4-PEGnMA in o-xylene, (Polymers 16 02126 i019) PyC4-PEGnMA in DMF [19], and (Polymers 16 02126 i020) PyEG5-PEGnMA in DMF [20]. The solid line represents the predicted trend for lp obtained with the PyC4-PEGnMA samples as a function of NS2 [19].
Figure 6. Plot of the persistence length (lp) as a function of the squared number of non-hydrogen atoms in the side chain (NS2) determined by (Polymers 16 02126 i004) viscometry for PCnMA [14] and PEF for (Polymers 16 02126 i005) PyC4-PCnMA in o-xylene, (Polymers 16 02126 i018) PyC4-PEGnMA in o-xylene, (Polymers 16 02126 i019) PyC4-PEGnMA in DMF [19], and (Polymers 16 02126 i020) PyEG5-PEGnMA in DMF [20]. The solid line represents the predicted trend for lp obtained with the PyC4-PEGnMA samples as a function of NS2 [19].
Polymers 16 02126 g006
Table 1. Chemical structure of the polymer samples PyC4-PCnMA, PyC4-PEGnMA, and PyEG5-PEGnMA.
Table 1. Chemical structure of the polymer samples PyC4-PCnMA, PyC4-PEGnMA, and PyEG5-PEGnMA.
PyC4-PCnMAPyC4-PEGnMAPyEG5-PEGnMA
n = 1, 4, 6, 8, 12, and 18n = 0–5, 9, 16, and 19n = 0, 3–5, 7, 9, and 19
Polymers 16 02126 i001Polymers 16 02126 i002Polymers 16 02126 i003
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Lulic, K.; Muller, G.; Gutierrez, R.; Little, H.; Duhamel, J. Flexibility of Poly(alkyl methacrylate)s Characterized by Their Persistence Length Determined through Pyrene Excimer Formation. Polymers 2024, 16, 2126. https://doi.org/10.3390/polym16152126

AMA Style

Lulic K, Muller G, Gutierrez R, Little H, Duhamel J. Flexibility of Poly(alkyl methacrylate)s Characterized by Their Persistence Length Determined through Pyrene Excimer Formation. Polymers. 2024; 16(15):2126. https://doi.org/10.3390/polym16152126

Chicago/Turabian Style

Lulic, Kristijan, Grégoire Muller, Renzo Gutierrez, Hunter Little, and Jean Duhamel. 2024. "Flexibility of Poly(alkyl methacrylate)s Characterized by Their Persistence Length Determined through Pyrene Excimer Formation" Polymers 16, no. 15: 2126. https://doi.org/10.3390/polym16152126

APA Style

Lulic, K., Muller, G., Gutierrez, R., Little, H., & Duhamel, J. (2024). Flexibility of Poly(alkyl methacrylate)s Characterized by Their Persistence Length Determined through Pyrene Excimer Formation. Polymers, 16(15), 2126. https://doi.org/10.3390/polym16152126

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