Positional Methyl Effects in Benzo[e][1,2,4]triazines—Synthesis and Crystal Structure Analysis of 5-Methyl-3-phenylbenzo[e][1,2,4]triazine and Its Precursor, N′-(3-Methyl-2-nitrophenyl)benzohydrazide
Abstract
1. Introduction
2. Materials and Methods
2.1. Synthesis of N′-(3-Methyl-2-nitrophenyl)benzhydrazide (IV)
2.2. Synthesis of 5-Methyl-3-phenylbenzo[e][1,2,4]triazine (I)
2.3. Crystal Structure Determination
3. Results and Discussion
3.1. Geometry Characteristics of the Molecular Structure
3.2. Supramolecular Arrangement
4. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
- Kumar, R.; Kumar, N.; Roy, R.K.; Singh, A. Triazines—A comprehensive review of their synthesis and diverse biological importance. Curr. Med. Drug Res. 2017, 1, 173. [Google Scholar] [CrossRef]
- Siegl, S.J.; Dzijak, R.; Vázquez, A.; Pohl, R.; Vrabel, M. The discovery of pyridinium 1,2,4-triazines with enhanced performance in bioconjugation reactions. Chem. Sci. 2017, 8, 3593–3598. [Google Scholar] [CrossRef]
- Shivakumar, K.I.; Pociecha, D.; Szczytko, J.; Kapuściński, S.; Monobe, H.; Kaszyński, P. Photoconductive bent-core liquid crystalline radicals with a paramagnetic polar switchable phase. J. Mater. Chem. C 2020, 8, 1083–1088. [Google Scholar] [CrossRef]
- Fuchs, T.; Chowdhury, G.; Barnes, C.L.; Gates, K.S. 3-Amino-1,2,4-benzotriazine 4-oxide: Characterization of a new metabolite arising from bioreductive processing of the antitumor agent 3-amino-1,2,4-benzotriazine 1,4-dioxide (tirapazamine). J. Org. Chem. 2001, 66, 107–114. [Google Scholar] [CrossRef] [PubMed]
- Rogers, F.J.M.; Norcott, P.L.; Coote, M.L. Recent advances in the chemistry of benzo[e][1,2,4]triazinyl radicals. Org. Biomol. Chem. 2020, 18, 8255–8277. [Google Scholar] [CrossRef] [PubMed]
- Palanki, M.S.S.; Cao, J.-G.; Chow, C.P.; Dneprovskaia, E.; Mak, C.C.; McPherson, A.; Pathak, V.P.; Renick, J.; Soll, R.; Zeng, R.-Q.; et al. Development of novel benzotriazines for drug discovery. Expert Opin. Drug Discov. 2009, 4, 33–49. [Google Scholar] [CrossRef]
- Hay, M.P.; Hicks, K.O.; Pruijn, F.B.; Pchalek, K.; Siim, B.G.; Wilson, W.R.; Denny, W.A. Pharmacokinetic/pharmacodynamic model-guided identification of hypoxia-selective 1,2,4-benzotriazine 1,4-dioxides with antitumor activity: The role of extravascular transport. J. Med. Chem. 2007, 50, 6392–6404. [Google Scholar] [CrossRef]
- Hay, M.P.; Denny, W.A. New and versatile syntheses of 3-alkyl and 3-aryl-1,2,4-benzotriazine 1,4-dioxides: Preparation of bioreductive cytotoxins SR4895 and SR4941. Tetrahedron Lett. 2002, 43, 9569–9571. [Google Scholar] [CrossRef]
- Wolf, F.J.; Pfister, K., 3rd; Wilson, R.M., Jr.; Robinson, C. Benzotriazines. I. A new series of compounds having antimalarial activity. J. Am. Chem. Soc. 1954, 76, 3551–3553. [Google Scholar] [CrossRef]
- Noronha, G.; Barrett, K.; Cao, J.; Dneprovskaia, E.; Fine, R.W.; Lohse, D.; Mak, C.C.; McPherson, A.; Palanki, M.S.S.; Pathak, V.P.; et al. Discovery and preliminary structure–activity relationship studies of novel benzotriazine-based compounds as Src inhibitors. Bioorganic Med. Chem. Lett. 2006, 16, 5546–5550. [Google Scholar] [CrossRef]
- Noronha, G.; Barrett, K.; Boccia, A.; Brodhag, T.; Cao, J.; Chow, H.; Hanna, E.; Hood, J.D.; Hu, S.; Kang, X.; et al. Discovery of [7-(2,6-dichlorophenyl)-5-methylbenzo[1,2,4]triazin-3-yl]-[4-(2-pyrrolidin-1-ylethoxy)phenyl]amine, a potent, orally active Src inhibitor with anti-tumor activity in preclinical assays. Bioorganic Med. Chem. Lett. 2007, 17, 602–608. [Google Scholar] [CrossRef]
- Kotovskaya, S.K.; Zhumabaeva, G.N.; Perova, N.M.; Baskakova, Z.M.; Charushin, V.N.; Chupakhin, O.N.; Belanov, E.F.; Bormotov, N.L.; Blakhnin, S.M.; Serova, O.A. Synthesis and antiviral activity of fluorinated 3-phenyl-1,2,4-benzotriazines. Pharm. Chem. J. 2007, 41, 62–68. [Google Scholar] [CrossRef]
- Srivastava, A.S.; Cherney, R.J.; Ngu, K. Indole and Azaindole Inhibitors of PAD Enzymes. WO2020033520, 13 February 2020. [Google Scholar]
- Flückiger-Mangual, S.; Gruber, D.; Folmer, R.; Hekking, K.F.W.; Veerman, J.J.N.; Eerland, M.; Fabritius, C.-H. Heterocyclic Derivatives, Pharmaceutical Compositions and Their Use in the Treatment or Amelioration of Cancer. U.S. Patent 20230064948, 2 March 2023. [Google Scholar]
- Kristukat, C.; Lang, E. Organic Light-Emitting Component, and Use of a Copper Complex in a Charge Transport Layer. WO2012079956, 21 June 2012. [Google Scholar]
- Yokoyama, M.; Hagiya, K.; Adachi, C.; Toyama, T. Compound Having a π-Electron Conjugated Unit and a Carbazole Group. WO2019087936, 9 May 2019. [Google Scholar]
- Constantinides, C.P.; Koutentis, P.A. Stable N- and N/S-rich heterocyclic radicals: Synthesis and applications. Adv. Heterocycl. Chem. 2016, 119, 173–207. [Google Scholar]
- Constantinides, C.P.; Zissimou, G.A.; Berezin, A.A.; Ioannou, T.A.; Manoli, M.; Tsokkou, D.; Theodorou, E.; Hayes, S.C.; Koutentis, P.A. Tetraphenylhexaazaanthracenes: 16π weakly antiaromatic species with singlet ground states. Org. Lett. 2015, 17, 4026–4029. [Google Scholar] [CrossRef]
- Nicolaides, C.; Bazzi, F.; Vouros, E.; Flesariu, D.F.; Chrysochos, N.; Koutentis, P.A.; Constantinides, C.P.; Trypiniotis, T. Metal-free organic radical spin source. Nano Lett. 2023, 23, 4579–4586. [Google Scholar] [CrossRef] [PubMed]
- Perras, F.A.; Flesariu, D.F.; Southern, S.A.; Nicolaides, C.; Bazak, J.D.; Washton, N.M.; Trypiniotis, T.; Constantinides, C.P.; Koutentis, P.A. Methyl-driven Overhauser dynamic nuclear polarization. J. Phys. Chem. Lett. 2022, 13, 4000–4006. [Google Scholar] [CrossRef] [PubMed]
- Constantinides, C.P.; Carter, E.; Eisler, D.; Beldjoudi, Y.; Murphy, D.M.; Rawson, J.M. Effects of halo substitution on 2′-chloro-5′-halo-phenyl-1,2,3,5-dithiadiazolyl radicals: A crystallographic, magnetic and EPR case study. Cryst. Growth Des. 2017, 17, 3017–3029. [Google Scholar] [CrossRef]
- Constantinides, C.P.; Eisler, D.J.; Alberola, A.; Carter, E.; Murphy, D.M.; Rawson, J.M. Weakening of the π*–π* dimerisation in 1,2,3,5-dithiadiazolyl radicals: Structural, EPR, magnetic and computational studies of dichlorophenyl dithiadiazolyls, Cl2C6H3CNSSN. CrystEngComm 2014, 16, 7298–7312. [Google Scholar] [CrossRef]
- Constantinides, C.P.; Berezin, A.A.; Zissimou, G.A.; Manoli, M.; Leitus, G.M.; Koutentis, P.A. The suppression of columnar π-stacking in 3-adamantyl-1-phenyl-1,4-dihydrobenzo[e][1,2,4]triazin-4-yl. Molecules 2016, 21, 636. [Google Scholar] [CrossRef]
- Berezin, A.A.; Zissimou, G.; Constantinides, C.P.; Beldjoudi, Y.; Rawson, J.M.; Koutentis, P.A. Route to benzo- and pyrido-fused 1,2,4-triazinyl radicals via N′-(het)aryl-N′-[2-nitro(het)aryl]hydrazides. J. Org. Chem. 2014, 79, 314–327. [Google Scholar] [CrossRef]
- Constantinides, C.P.; Lawson, D.B.; Zissimou, G.A.; Berezin, A.A.; Mailman, A.; Manoli, M.; Kourtellaris, A.; Leitus, G.M.; Clérac, R.; Tuononen, H.M.; et al. Polymorphism in a π-stacked Blatter radical: Structures and magnetic properties of 3-phenyl-1-(pyrid-2-yl)-1,4-dihydrobenzo[e][1,2,4]triazine-4-yl. CrystEngComm 2020, 22, 5453–5463. [Google Scholar] [CrossRef]
- Ivanov, S.M. 1,2,4-Triazines and Their Benzo Derivatives. In Comprehensive Heterocyclic Chemistry IV; Black, D.S., Cossy, J., Stevens, C.V., Eds.; Elsevier: Oxford, UK, 2022; pp. 29–180. [Google Scholar]
- Mohammadi Ziarani, G.; Mostofi, M.; Gholamzadeh, P.; Mohammadi-Khanaposhtani, M.; Yavari, H. The synthesis of 1,2,4-benzotriazines. ARKIVOC 2019, 2019, 41–105. [Google Scholar] [CrossRef]
- Obijalska, E.; Kowalski, M.K. Recent progress in the synthesis of 1,2,4-benzotriazines (microreview). Chem. Heterocycl. Compd. 2017, 53, 846–848. [Google Scholar] [CrossRef]
- Dyatkin, A.B.; Boudreault, P.-L.T.; Ji, Z.; Luo, S.-M.; Tsai, J.-Y. Organic Electroluminescent Materials and Devices. U.S. Patent 20190248818, 15 August 2019. [Google Scholar]
- Branowska, D.; Olender, E.; Wysocki, W.; Karczmarzyk, Z.; Bancerz, I.; Ledwoń, P.; Łapkowski, M.; Mirosław, B.; Urbańczyk-Lipkowska, S.; Kalicki, P.B. Synthesis and electrochemical characterization of oligothiophenes with 1,2,4-triazine and 5,5′-bi-1,2,4-triazine as strong electron acceptor units. Electrochim. Acta 2016, 214, 19–30. [Google Scholar] [CrossRef]
- Maggiore, A.; Tan, X.; Brosseau, A.; Danos, A.; Miomandre, F.; Monkman, A.P.; Audebert, P.; Clavier, G. Novel D-A chromophores with condensed 1,2,4-triazine system simultaneously display thermally activated delayed fluorescence and crystallization-induced phosphorescence. Phys. Chem. Chem. Phys. 2022, 24, 17770–17781. [Google Scholar] [CrossRef] [PubMed]
- Cerri, R.; Boido, A.; Sparatore, F. Oxidation and acid-catalyzed cyclization of aldehyde 2-aminophenylhydrazones. Alternative syntheses for 1,2,4-benzotriazines and benzimidazoles. J. Heterocycl. Chem. 1979, 16, 1005–1008. [Google Scholar] [CrossRef]
- Khodja, M.; Moulay, S.; Boutoumi, H.; Wilde, H. Two-step syntheses of 3-methyl and 3-phenyl-1,2,4-benzotriazines. Heteroat. Chem. 2006, 17, 166–172. [Google Scholar] [CrossRef]
- Bodzioch, A.; Pomikło, D.; Celeda, M.; Pietrzak, A.; Kaszyński, P. 3-Substituted benzo[e][1,2,4]triazines: Synthesis and electronic effects of the C(3) substituent. J. Org. Chem. 2019, 84, 6377–6394. [Google Scholar] [CrossRef]
- Pomikło, D.; Bodzioch, A.; Kaszyński, P. 3-Substituted Blatter radicals: Cyclization of N-arylguanidines and N-arylamidines to benzo[e][1,2,4]triazines and PhLi addition. J. Org. Chem. 2023, 88, 2999–3011. [Google Scholar] [CrossRef]
- Teymouri, M.; Pietrzak, A.; Bartos, P. (Hetero)arene ring-fused [1,2,4]triazines. Molbank 2024, 2024, M1824. [Google Scholar] [CrossRef]
- Constantinides, C.P.; Raza, S.; Bazzi, F.; Sharara, N.; Marincean, S. Comparative analysis of the substituent effects on the supramolecular structure of N′-(4-methyl-2-nitrophenyl)benzohydrazide and N′-(2-nitro-(4-trifluoromethyl)phenyl)benzohydrazide. Crystals 2025, 15, 732. [Google Scholar] [CrossRef]
- Constantinides, C.P.; Raza, S.; Bazzi, F.; Sharara, N.; Marincean, S. Synthesis and crystal structures of 6- and 8-methyl-3-phenylbenzo[e][1,2,4]triazines. Acta Crystallogr. Sect. E Crystallogr. Commun. 2025, 81, 699–705. [Google Scholar] [CrossRef] [PubMed]
- CrysAlisPro Software System, version 1.171.43.130a; Rigaku Oxford Diffraction: Yarnton, UK, 2024.
- Pflugrath, J.W. The finer things in X-ray diffraction data collection. Acta Crystallogr. Sect. D 1999, 55, 1718–1725. [Google Scholar] [CrossRef] [PubMed]
- Sheldrick, G.M. SHELXT—Integrated space-group and crystal-structure determination. Acta Crystallogr. Sect. A 2015, 71, 3–8. [Google Scholar] [CrossRef]
- Dolomanov, O.V.; Bourhis, L.J.; Gildea, R.J.; Howard, J.A.K.; Puschmann, H. OLEX2: A complete structure solution, refinement and analysis program. J. Appl. Crystallogr. 2009, 42, 339–341. [Google Scholar] [CrossRef]
- Sheldrick, G.M. Crystal structure refinement with SHELXL. Acta Crystallogr. Sect. C 2015, 71, 3–8. [Google Scholar] [CrossRef]
- Seth, N.; Brown, S.N. CCDC 1863863, Cambridge Crystallographic Data Centre, Access Structures. Available online: http://www.ccdc.cam.ac.uk/structures (accessed on 1 March 2026).
- Kesternich, V.; Gahona, P.; Perez-Fehrmann, M.; Brito, I.; Lopez-Rodriguez, M. 2-Amino-N′-phenylbenzohydrazide. Acta Crystallogr. Sect. E 2012, 68, o1847. [Google Scholar] [CrossRef]
- Wardell, J.L.; Low, J.N.; Glidewell, C. N-(4-Nitrobenzoyl)-N′-phenylhydrazine: A three-dimensional hydrogen-bonded framework. Acta Crystallogr. Sect. C 2007, 63, o334. [Google Scholar] [CrossRef]
- Wardell, S.M.S.V.; de Souza, M.V.N.; Wardell, J.L.; Low, J.N.; Glidewell, C. N-(3,5-Dinitrobenzoyl)-N′-phenylhydrazine: Sheets built from N—H⋯O and C—H⋯O hydrogen bonds. Acta Crystallogr. Sect. E 2006, 62, o2589. [Google Scholar] [CrossRef]
- Saeed, A.; Arshad, I.; Flörke, U. N′-(2,4-Dinitrophenyl)benzohydrazide. Acta Crystallogr. Sect. E 2012, 68, o2418. [Google Scholar] [CrossRef]
- Nowick, J.S.; Pairish, M.; Lee, I.Q.; Holmes, D.L.; Ziller, J.W. An Extended β-Strand Mimic for a Larger Artificial β-Sheet. J. Am. Chem. Soc. 1997, 119, 5413–5424. [Google Scholar] [CrossRef]
- Saeed, A.; Arshad, I.; Flörke, U. Synthesis, crystal structure, and DFT study of N′-(2,4-dinitrophenyl)-2-fluorobenzohydrazide. J. Chem. 2013, 2013, 648121. [Google Scholar] [CrossRef]
- Ding, Y.; Zhang, L.; Yang, S.; Li, Z.; Wang, P.-Y. Synthesis, antimicrobial activity, and molecular docking of benzoic hydrazide or amide derivatives containing a 1,2,3-triazole group as potential SDH inhibitors. Chin. J. Chem. 2021, 39, 1319–1330. [Google Scholar] [CrossRef]
- Cortés, E.; Abonía, R.; Cobo, J.; Glidewell, C. Four related esters: Two 4-(aroylhydrazinyl)-3-nitrobenzoates and two 3-aryl-1,2,4-benzotriazine-6-carboxylates. Acta Crystallogr. Sect. C 2013, 69, 754–760. [Google Scholar] [CrossRef]
- Guru, M.M.; Punniyamurthy, T. Copper(II)-catalyzed aerobic oxidative synthesis of substituted 1,2,3- and 1,2,4-triazoles from bisarylhydrazones via C–H functionalization/C–C/N–N/C–N bond formation. J. Org. Chem. 2012, 77, 5063–5073. [Google Scholar] [CrossRef] [PubMed]
- Shuler, W.G.; Smith, E.A.; Hess, S.M.; McFadden, T.M.C.; Metz, C.R.; VanDerVeer, D.G.; Pennington, W.T.; Mabe, P.J.; Knick, S.L.; Beam, C.F. Preparation and X-ray crystal structure of 3-(4-(dimethylamino)phenyl)-2-(phenylamino)isoquinolin-1(2H)-one, 3-(4-methoxyphenyl)-2-(phenylamino)isoquinolin-1(2H)-one, and 2-methyl-N′-(4-methylbenzoyl)-N′-phenylbenzohydrazide from polylithiated 2-methylbenzoic acid phenylhydrazide and methyl 4-dimethylaminobenzoate, methyl 4-methoxybenzoate, or methyl 4-methylbenzoate. J. Chem. Crystallogr. 2012, 42, 952–959. [Google Scholar]
- Jha, A.K.; Kumari, R.; Easwar, S. A hydrazine insertion route to N′-alkyl benzohydrazides by an unexpected carbon–carbon bond cleavage. Org. Lett. 2019, 21, 8191–8195. [Google Scholar] [CrossRef]
- Ke, C.; Cao, Q.; Luo, Y.; Liu, X.; Feng, X. Catalytic asymmetric amination of azlactones with azobenzenes. Chem. Commun. 2022, 58, 5881–5884. [Google Scholar] [CrossRef]
- Zheng, L.; Zhuo, X.; Wang, Y.; Zou, X.; Zhong, Y.; Guo, W. Photocatalytic cross-dehydrogenative coupling reaction toward the synthesis of N,N-disubstituted hydrazides and their bromides. Org. Chem. Front. 2022, 9, 3012–3021. [Google Scholar] [CrossRef]
- Nicoló, F.; Panzalorto, M.; Scopelliti, R.; Grassi, G.; Risitano, F. 5,7-Dimethyl-3-phenyl-1,2,4-benzotriazine. Acta Crystallogr. Sect. C 1998, 54, 405–407. [Google Scholar] [CrossRef]









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Constantinides, C.P.; Yi, J.-S.; Dakdouk, H.; Marincean, S. Positional Methyl Effects in Benzo[e][1,2,4]triazines—Synthesis and Crystal Structure Analysis of 5-Methyl-3-phenylbenzo[e][1,2,4]triazine and Its Precursor, N′-(3-Methyl-2-nitrophenyl)benzohydrazide. Crystals 2026, 16, 206. https://doi.org/10.3390/cryst16030206
Constantinides CP, Yi J-S, Dakdouk H, Marincean S. Positional Methyl Effects in Benzo[e][1,2,4]triazines—Synthesis and Crystal Structure Analysis of 5-Methyl-3-phenylbenzo[e][1,2,4]triazine and Its Precursor, N′-(3-Methyl-2-nitrophenyl)benzohydrazide. Crystals. 2026; 16(3):206. https://doi.org/10.3390/cryst16030206
Chicago/Turabian StyleConstantinides, Christos P., Jin-Seok Yi, Haidar Dakdouk, and Simona Marincean. 2026. "Positional Methyl Effects in Benzo[e][1,2,4]triazines—Synthesis and Crystal Structure Analysis of 5-Methyl-3-phenylbenzo[e][1,2,4]triazine and Its Precursor, N′-(3-Methyl-2-nitrophenyl)benzohydrazide" Crystals 16, no. 3: 206. https://doi.org/10.3390/cryst16030206
APA StyleConstantinides, C. P., Yi, J.-S., Dakdouk, H., & Marincean, S. (2026). Positional Methyl Effects in Benzo[e][1,2,4]triazines—Synthesis and Crystal Structure Analysis of 5-Methyl-3-phenylbenzo[e][1,2,4]triazine and Its Precursor, N′-(3-Methyl-2-nitrophenyl)benzohydrazide. Crystals, 16(3), 206. https://doi.org/10.3390/cryst16030206

