Sentinel-2A Image Reflectance Simulation Method for Estimating the Chlorophyll Content of Larch Needles with Pest Damage
Abstract
:1. Introduction
- Downscaling Sentinel-2A image data and decomposing mixed pixels in multispectral remote sensing images by simulating multispectral reflectance, and enhancing the expression of forest canopy information with Sentinel image pixels;
- Analyzing the potential of the Sentinel-2A spectral vegetation index and its spectral derivative for estimating the chlorophyll content;
- Improving the accuracy of chlorophyll content estimation via Sentinel-2A.
2. Materials and Methods
2.1. Study Data
2.1.1. Study Area
2.1.2. Multispectral Remote Sensing Data
- (1)
- Sentinel-2A satellite image data
- (2)
- UAV RGB images
2.1.3. Ground Hyperspectral Data
2.1.4. Relative Chlorophyll Content (SPAD) Data
2.2. Methodology
2.2.1. Data Processing
- (1)
- Sentinel-2A multispectral data
- (2)
- UAV RGB data
- (3)
- Ground hyperspectral data
- (4)
- Chlorophyll content data
2.2.2. Sentinel-2A Multispectral Reflectance Simulation
- (1)
- Downscaling of individual bands of Sentinel-2A images
- (2)
- Sentinel-2A image geometric correction
- (3)
- Extraction of larch infestation information
- (4)
- Calculation of the degree of depression for healthy and damaged larch
- (5)
- Mixed-image element decomposition
- (6)
- Multispectral reflectance simulation
- (i)
- Sample-plot-based multispectral reflectance modelingThe Sentinel-2A image multispectral reflectance is simulated via ground-based hyperspectral measured data, and the energy received from the Sentinel-2A satellite sensor in each wavelength band can be interpreted as the sum of the energy received at each wavelength within the wavelength range of the band. Therefore, the image multispectral reflectance simulation can be regarded as a redistribution of energy by the spectral response function, which is equivalent to a weighted average of the measured hyperspectral data by wavelength. On this basis, the simulated spectral reflectance of each band can be calculated via the following algorithm:To simulate the multispectral reflectance of the sample plots, 44 sample plots were selected from the experimental area (each plot was as similar to the pure image element as possible), the canopy spectral reflectance of the sample trees in these sample plots was measured, and the spectral reflectance of the sample plots was simulated through the above method with the measured hyperspectral measured data and the spectral response function. Then, considering the relationship between the simulated and actual spectral reflectance, the Sentinel-2A image multispectral reflectance simulation model was constructed.
- (ii)
- Element-based multispectral simulation of Sentinel-2A imagesOn the basis of the reflectance extraction results for healthy and damaged larch, the reflectance values were simulated separately via the sample-based multispectral reflectance simulation model. Then, with the information for healthy () and damaged () larch, the reflectance of each waveband () of image elements was calculated; notably, the reflectance of healthy forest () and damaged forest () elements simulated with the algorithm was obtained with . obtained in this way can realistically reflect the reflectance of the larch canopy.
2.2.3. Estimation Models
- (1)
- Sensitive spectral feature extraction method
- (i)
- Spectral index calculationThe spectral index (denoted as SI) in this study encompasses a vegetation index and texture features. The vegetation index is obtained by calculating the spectral reflectance of two or more bands, which can simplify the spectral information, highlight the vegetation features, and attenuate the influence of background noise on the spectral features of the forest canopy. The spectral texture features reflect the roughness of the forest canopy for areas with different degrees of damage. In this study, the spectral vegetation index and texture features, which are closely related to the chlorophyll content of plants, were selected as the spectral features for chlorophyll estimation, and, consequently, the vegetation spectral index was calculated, as shown in Table 2. The texture features were calculated via a principal component analysis of the Sentinel-2A imagery, followed by the use of the first principal component, which was filtered on the basis of second-order probability statistics to obtain T_mean, T_variance, T_homogeneity, T_contrast, T_dissimilarity, T_entropy, T_ secondmoment and T_correlation, and eight other texture features.
- (ii)
- Spectral derivative characterizationThe derivative of spectral reflectance can be used to identify spectral absorption features and reduce the interference of background noise. Therefore, in this study, the first-order derivatives of the reflectance of the spectral bands in the Sentinel-2A images (denoted D2, D3, D4, D5, D6, D7, D8, and D8A) and the first-order derivatives of the bands combined with the DN35, DR35, SD56, and SDDR indices (denoted D2, D3, D4, D5, D6, D7, D8, and D8A) were calculated with the image derivative module in ENVI as the spectral derivative features (denoted SDF) for the remote sensing monitoring of pests, as follows.DN35 = (D5 − D3)/(D5 + D3)DR35 = D5/D3SD56 = D5 + D6SDDR = (D5 + D6)/D4To compare the accuracy of chlorophyll estimates in cases with simulated and remotely sensed data, spectral indices and spectral derivatives were calculated separately for both cases.
- (iii)
- Spectral sensitivity characterizationTo analyze the correlations between SI and SDF and CHLC, the corresponding coefficients of determination, R2, were calculated. Then, an R2 threshold was selected, and screening was performed to select the sensitive SI and SDF. Next, the SPA algorithm was used to downsize these sensitive spectral features and obtain the spectral features used in the final modeling process.
- (2)
- Monitoring models
2.2.4. Model Evaluation
3. Results
3.1. Downscaling Results for Individual Bands of Sentinel-2A Images
3.2. Simulation of Sentinel-2A Multispectral Reflectance
3.2.1. UAV RGB Images-Based Health and Damage Larch Information Extraction
3.2.2. Sentinel-2A Image Pixels-Based Healthy and Damaged Larch Depression Information Extraction
3.2.3. Sample-Plot-Based Multispectral Reflectance Simulation for Sentinel-2A Imagery
3.2.4. Image-Based Multispectral Reflectance Simulation with Sentinel-2A Images
3.3. Spectral Feature Sensitivity Analysis
3.4. Conifer Chlorophyll Content Estimation Model and Accuracy Evaluation
4. Discussion
4.1. Multispectral Reflectance Simulation and Mixed-Image Decomposition Effects of Sentinel-2A Data
4.2. Sensitivity of Spectral Characteristics to the Chlorophyll Content
4.3. Accuracy of Chlorophyll Content (CHLC) Estimation with Sentinel-2A Data
5. Conclusions
- (1)
- SI and SDF spectral features based on simulated remote sensing data were significantly sensitive to the chlorophyll content of trees with yarrow larch looper infestations, and the highly sensitive spectral features for th chlorophyll content were the SAVI and EVI2 SIs and the D_B2 and D_B5 SDFs.
- (2)
- The estimation model based on simulated data yielded significantly higher accuracy than the model based on nonsimulated data, with better CHLC estimates. Notably, the , , , , and MPI of the SDF-PLSR-based model for pest CHLC estimation were 0.8159, 0.1143, 0.1080, 0.1153, and 0.8636, respectively, which was an improvement in the performance over the SDF-PLSR model on the basis of nonsimulated remote sensing data of at least 0.0404 in each case.
- (3)
- When the simulated and nonsimulated spectral reflectance values of image elements were compared, the simulated spectral reflectance better reflected the spectral reflectance characteristics of the larch canopy, and the simulated spectral reflectance was more sensitive to larch damage than the nonsimulated spectral reflectance was. Compared with those in the case of nonsimulated spectral reflectance, the decreases in damaged larch in the green light, red edge, and near-infrared bands and the increase in the red light band in the case of simulated data were more significant, indicating that the simulated values were more sensitive to changes in the larch canopy.
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
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Vegetation Index | Formulation | References |
---|---|---|
VARI (visible atmospherically resistant index) | [24] | |
ExG (excess green index) | [25] | |
ExR (excess red index) | [26] | |
ExB (excess blue index) | [26] | |
ExGR (extra green minus extra red) | [26] | |
GRVI (green red vegetation index) | [27] | |
MGRVI (modified green red vegetation index) | [28] | |
GLI (green leaf index) | [29] | |
RGBVI (red, green and blue vegetation indices) | [28] | |
IKAW(Kawashima Index) | [30] | |
r (red index) | [31] | |
g (green index) | [31] | |
b (blue index) | [31] |
Vegetation Index (VI) | Formulation | References |
---|---|---|
ARI1 (Anthocyanin Reflectance Index 1) | [32] | |
ARI2 (Anthocyanin Reflectance Index 2) | [32] | |
BAI (Biochemical Affinity Index) | [33] | |
CRI1 (Carotenoid Reflectance Index 1) | [24] | |
CRI2 (Carotenoid Reflectance Index 2) | [24] | |
CHL RED EDGE | [24] | |
EVI (Enhanced Vegetation Index) | [34] | |
EVI2 (Enhanced Vegetation Index 2) | [34] | |
GNDVI (Green Normalized Difference Vegetation Index) | [35] | |
IRECI (Inverted Red-Edge Chlorophyll Index) | [36] | |
MCARI (Modified Chlorophyll Absorption in Reflectance Index) | [37] | |
MSAVI2 (Modified Soil Adjusted Vegetation Index 2) | [38] | |
MTCI (MERIS Terrestrial Chlorophyll Index) | [39] | |
NDI45 (Normalized Difference Index 45) | [7] | |
NDVI (Normalized Difference Vegetation Index) | [40] | |
NDWI (Normalized Difference Water Index) | [41] | |
PSRI (Plant Senescence Reflectance Index) | [42] | |
PSSR (Plant Senescence Reflectance) | [43] | |
RED EDGE NDVI | [44] | |
SAVI (Soil Adjusted Vegetation Index) | [45] | |
S2REP (Sentinel-2 Red Edge Position) | [46] |
Vegetation Index | F | Selection of Indicators |
---|---|---|
R | 2254.10 | ● |
G | 3439.70 | ● |
B | 326.48 | ○ |
VARI | 100.46 | ○ |
RGBVI | 1.11 | ○ |
MGRVI | 1.10 | ○ |
IKAW | 257.52 | ○ |
GRVI | 1.05 | ○ |
GLI | 2988.70 | ○ |
ExR | 3981.50 | ● |
ExGR | 4113.40 | ● |
ExG | 3439.70 | ● |
ExB | 1241.40 | ● |
Spectral Characteristics | Simulated Data | Nonsimulated Data | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
mR2cv | mRMSEcv | rR2cv | rRMSEcv | MPI | mR2cv | mRMSEcv | rR2cv | rRMSEcv | MPI | |
SI | 0.8150 | 0.1194 | 0.1796 | 0.3888 | 0.8029 | 0.7570 | 0.1245 | 0.1849 | 0.3984 | 0.7796 |
SDF | 0.8159 | 0.1143 | 0.1080 | 0.1153 | 0.8636 | 0.7722 | 0.1648 | 0.1251 | 0.1528 | 0.8232 |
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Yang, L.; Huang, X.; Zhou, D.; Zhang, J.; Bao, G.; Tong, S.; Bao, Y.; Ganbat, D.; Altanchimeg, D.; Enkhnasan, D.; et al. Sentinel-2A Image Reflectance Simulation Method for Estimating the Chlorophyll Content of Larch Needles with Pest Damage. Forests 2024, 15, 1901. https://doi.org/10.3390/f15111901
Yang L, Huang X, Zhou D, Zhang J, Bao G, Tong S, Bao Y, Ganbat D, Altanchimeg D, Enkhnasan D, et al. Sentinel-2A Image Reflectance Simulation Method for Estimating the Chlorophyll Content of Larch Needles with Pest Damage. Forests. 2024; 15(11):1901. https://doi.org/10.3390/f15111901
Chicago/Turabian StyleYang, Le, Xiaojun Huang, Debao Zhou, Junsheng Zhang, Gang Bao, Siqin Tong, Yuhai Bao, Dashzebeg Ganbat, Dorjsuren Altanchimeg, Davaadorj Enkhnasan, and et al. 2024. "Sentinel-2A Image Reflectance Simulation Method for Estimating the Chlorophyll Content of Larch Needles with Pest Damage" Forests 15, no. 11: 1901. https://doi.org/10.3390/f15111901
APA StyleYang, L., Huang, X., Zhou, D., Zhang, J., Bao, G., Tong, S., Bao, Y., Ganbat, D., Altanchimeg, D., Enkhnasan, D., & Ariunaa, M. (2024). Sentinel-2A Image Reflectance Simulation Method for Estimating the Chlorophyll Content of Larch Needles with Pest Damage. Forests, 15(11), 1901. https://doi.org/10.3390/f15111901